Salmo trutta (river trout): 115161885
Help
Entry
115161885 CDS
T08542
Name
(RefSeq) sodium/calcium exchanger 3-like
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
stru
Salmo trutta (river trout)
Pathway
stru04020
Calcium signaling pathway
stru04260
Cardiac muscle contraction
stru04261
Adrenergic signaling in cardiomyocytes
stru04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
115161885
04020 Calcium signaling pathway
115161885
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115161885
04261 Adrenergic signaling in cardiomyocytes
115161885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stru02000
]
115161885
00536 Glycosaminoglycan binding proteins [BR:
stru00536
]
115161885
Transporters [BR:
stru02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
115161885
Glycosaminoglycan binding proteins [BR:
stru00536
]
Heparan sulfate / Heparin
Others
115161885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
115161885
NCBI-ProteinID:
XP_029568553
Ensembl:
ENSSTUG00000022100
LinkDB
All DBs
Position
25:complement(4342577..4459939)
Genome browser
AA seq
949 aa
AA seq
DB search
MDRFRPRLTRPGPEIRTGSSSSSSYQACLWLGLLSVAAAFKCAEGARTTPSPATTDSHNA
TCSEGTSRCKPGIVLPIWYPEDPSMGDKMARVIVYFVAMIYMFLGVSIIADRFMAAIEVI
TSQEKEIIIKRANGETTTATIRIWNETVSNLTLMALGSSTPEILLSVIEVCGHDFVAGEL
GPSTIVGSAAFNMFVIIGLCVSVIPEGETRKVKHLRVFFVTAAWSIFAYIWLYMILAVFS
PNVVQIWEGLLTLAFFPICVILAWVADRRLLFYKFMHKKYRTDNHRGVIIETEHERSKGI
EMMDGGGKIVNSHFAHDGGAANNLISLIEGKEVDESRRDMIRILKDLKQKHPEKEMDQLV
EMANYYALSHQQKSRAFYRIQATRMMTGAGNILKKHVAEQTKRSASVQEVCVVGEEVEEY
VSRMTFEPAVYQCLENCGAVLLAISRKGGDMANTIYVDYKTEDGSANAGADYEFTEGTVV
FKPGEIVKEISIGIIDDDIFEEDEHFFVRLSNVRVLESDEDETLLSPNSLPYPKALLGFP
SVATVTILDDDHAGIFTFESNTCQVSESVGVMEVKVLRTSGARGTVIVPYRTMEGIAKGG
GEDFEDTYGELEFRNDETCKTFHVKVIDDEEYEKNKNFFLELAEPRMVDMSLQKALLLAE
DVPKFSSEEEEAKRIAEMGKPVLGEHSKLEVIIEESYEFKNTVDKLIKKTNLALVVGTNS
WRQQFMEAITVSAGDEDEEDSGEERLPSCFDYVMHFLTVFWKVLFACVPPTDYLNGWACF
FISIVIIGMLTAVIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAAVQDTYAD
ASIGNVTGSNAVNVFLGIGVAWSIAAIYWHMQGKQFVVEAGSLAFSVTLYTIFAFLGISV
LLYRRRAHIGGELGGPRGHRLATSAFFFSLWFLYIFFSSMEAYCHIEGF
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcttcaggccgaggctgacgaggccggggccggagatcaggacggggtcgtcg
tcgtcctcctcctaccaagcctgcctctggttgggcctgctctccgtggccgcagccttc
aagtgcgcagagggcgcccgcaccacccccagccccgccaccacagactcccacaatgcc
acctgctccgagggcacgtccaggtgcaagccaggaatcgtcctgcccatctggtaccct
gaggacccctccatgggggataagatggccagagtcatcgtctactttgtagctatgatc
tacatgttcctgggagtgtccatcatagcagaccgcttcatggcggccattgaggtcatc
acctcccaggagaaggagattattattaagagagccaacggagagaccaccaccgctacc
attagaatctggaacgagacggtctccaacctgaccctcatggccctgggttctagtacc
cctgagatcctgctgtctgtcatcgaagtctgcggacacgacttcgtagctggcgagctg
gggccgtctacgatcgtcggcagcgctgccttcaacatgttcgtgatcatcggcctgtgt
gtgtctgtgatccccgagggagagacgaggaaggtgaaacatctcagagtgttctttgtg
acggcggcttggagtatcttcgcctacatctggctctacatgatcctggcggtgttcagt
cccaacgtggtccagatatgggaggggctgctaaccctggccttcttccccatctgtgtc
atcctggcctgggtagccgatcgacgactcctcttctacaagttcatgcacaagaagtac
cgcaccgacaaccaccgcggcgtcatcatcgagaccgagcacgaacgctccaagggcatc
gagatgatggacggcggcggcaagatagtcaactcccacttcgcccacgatggaggcgcc
gccaataacctcatcagcctgatcgagggaaaagaagtggacgagtctcggcgggatatg
atccggatcctgaaggacctgaagcagaaacacccagagaaggagatggaccagctggta
gagatggctaactactacgccttgtcccaccagcagaagagcagagccttctaccgcatc
caggccacgcgcatgatgacgggcgccgggaacatcctgaagaagcacgtggcggagcag
accaagaggagcgccagcgtacaggaagtgtgtgtggtgggggaggaagtggaggagtac
gtgtcacggatgaccttcgaacccgccgtgtaccagtgcctggagaactgcggcgccgtc
ttgctggccatctccaggaagggcggcgacatggccaataccatttacgtggattacaag
acggaggacggctcagccaacgccggcgcagactacgagttcaccgagggaaccgtggtg
ttcaagcccggcgagatcgtcaaggagatcagcatcggcatcatcgatgacgacatcttc
gaggaggacgagcacttcttcgtgcgtctcagcaacgtgcgcgtcctggagtcagacgaa
gatgagacgctactgtcccccaactctctcccgtaccctaaagccctgctggggttcccg
tccgtcgccacagttaccatcctggacgacgaccacgccgggatattcaccttcgagagc
aacacctgtcaggtgagcgagagcgtgggcgtgatggaggtgaaggtgctgaggacttcg
ggggcgagggggacagtcattgtgccctatcgtaccatggaggggatcgccaagggagga
ggggaggactttgaggacacctacggagaactggagttcaggaacgacgagacctgcaaa
acatttcatgtgaaagtgatagatgatgaggagtatgagaaaaacaagaacttcttcctg
gagctggccgagcctcgcatggtagacatgagcctgcagaaagcactgttactggctgaa
gatgtccctaagttctcgtcagaggaagaggaagctaagcggattgcagagatggggaag
ccagtgctgggggaacactccaaactggaggttatcatcgaggagtcctacgagttcaag
aacacagtggacaagctgatcaagaagaccaacctggctctggtggtgggcaccaactcc
tggagacaacagttcatggaggccattacagtcagtgcaggagacgaggatgaggaagac
tctggtgaagagcgtctcccgtcatgtttcgactacgtcatgcacttcctcaccgtcttc
tggaaggtgctgttcgcctgtgttcctcccacggactacctgaacggctgggcctgcttc
ttcatctccatcgtcatcatcggcatgctgaccgcagtgataggagatctggcctctcac
tttggctgcaccatcggcctgaaggactctgttactgccgtggtgttcgtagctctgggt
acatctgttcctgatacatttgccagtaaggtagcggcggtgcaggacacatatgcagac
gcctccatcggtaacgtgacgggcagcaacgctgtcaacgtgttcctgggcatcggggtg
gcgtggtcgatagccgccatctactggcacatgcagggcaagcagtttgtggtggaggcc
ggttccctggccttctccgtcaccctctacaccatcttcgccttcctggggatctccgtg
ctgctgtaccgccgccgggcccacatcgggggggagctgggcgggccgcgcggccacaga
ctggccacctcagccttcttcttcagtctctggttcctctacatcttcttctccagcatg
gaggcctactgtcatatagagggcttctag
DBGET
integrated database retrieval system