Salmo trutta (river trout): 115161890
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Entry
115161890 CDS
T08542
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115161890
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115161890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115161890
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
SR proteins
115161890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
115161890
NCBI-ProteinID:
XP_029568559
Ensembl:
ENSSTUG00000022697
LinkDB
All DBs
Position
25:complement(4867669..4875823)
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AA seq
340 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREVNLKNGFGFVEFDDPRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGGGGGGGRFSPRFSSYRQGSGDRRGGGGGGSSRYGP
PVRTEHRIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTNKNEGVVEFASHSDMKNALD
KLDGTDLNGRKLKLSEDRKSRRSRSRSRGSRSYSRSRSRSRSPRSKSPSRSRSRNRSRSP
RSRSPRSASRTPEKKPSSGGGGGGGGRAAHRSTSRSPSRSKSRSPAPRSRTPPARSPSRS
PPARSRTPPARSRSPPPRSRSPAPARKPSRSRSPSVESQH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgagtgtttatcggtcgtttgagccctcatgctcgtgagagggacgtg
gagaaattcttcaaaggttatggaaggatccgagaagtaaatctgaagaacggattcggc
tttgtggagtttgatgaccccagagacgctgacgatgcagtttacgagctgaatggcaag
gaactctgtagtgaaagggtgactatagagcatgcccgctccagaagagggaggggtggt
ggacctgggatgggaggtggaggaggaggaggacgtttctcacctcgtttcagcagctac
cgccaggggtctggtgatcgccgtggtggtggtggtggtggctccagtaggtatggtcct
cctgtgcgcactgaacacagaatcattgtggagaacctgtcgtcgcgcatcagttggcag
gacctgaaagacctgatgaggaaagttggagaggtcacctttgtggatgcccaccgaacc
aacaagaatgaaggggtggtggagtttgcgtcacacagtgatatgaagaacgcccttgat
aagcttgacggtacagacttgaatggacgaaagctgaagctgtctgaggatcgcaagagc
cgccgcagcaggagtcgttcccgtggctctcgcagctactcccggtcccgtagccgtagc
cggtccccccgctccaagtcccccagccgtagcaggagccgtaaccgctccaggagcccc
cgctcccggtccccccgctccgccagccgtactccggagaagaagccttcctcaggagga
ggaggaggaggagggggcagggctgcacatcgctccacttcacgttccccttcccgttcc
aaatcccgctcccctgcaccacgttcccgtacccctcccgcacgctctccttcccgctcc
cctcccgcacgttcccgtacccctcccgcacgttcccgctcccctcccccacgctcccgt
tctcctgccccggcccggaagccgtctcggtctcggtccccctcggtggagagccagcac
tga
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