Salmo trutta (river trout): 115161930
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Entry
115161930 CDS
T08542
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04141
Protein processing in endoplasmic reticulum
stru04210
Apoptosis
stru04217
Necroptosis
stru04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115161930
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115161930
04217 Necroptosis
115161930
04218 Cellular senescence
115161930
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115161930
Enzymes [BR:
stru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
115161930
Peptidases and inhibitors [BR:
stru01002
]
Cysteine peptidases
Family C2: calpain family
115161930
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
CAPN13-like_C_EFh
EF-hand_6
EF-hand_1
Cpf1_PI-like
Motif
Other DBs
NCBI-GeneID:
115161930
NCBI-ProteinID:
XP_029568633
LinkDB
All DBs
Position
25:complement(6862507..6889316)
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AA seq
699 aa
AA seq
DB search
MPPPGVCMSIMQERNKQEGVGSLANPEKHSNQDFQQLKQYCLARGVRYIDEMFPPDHNSI
GDGLLSSDFMSRVVWLRPAKIIQNPDFIVDGLSRFDFGQGMVEDCWFLASIGALTFQKDI
LEQVVPLNQTFKEDYCGIFHFRFWRFGRWVDVVIDDKLPTVDGNLIFVHSKTPNEFWPAL
LEKAYAKVCGSYADMNLGTPSEAMMDFTGGVHITFKLTDAPSNLWDLLFRAVQSKSLIGC
GTPQGETSANTVAPNGLVRGHAYTVTGVNKQILSQGRPVNLIRLFNPWGRGEWKGDWSDK
SSMWQTVSPNDRKMCLSVKEDGEFWMTMEDFCKHFTDVTICCMRPDFLDGNSKGLWTHSI
HDGRWVAGTTAGGCMNFPNSFWTNPQYRVKIEGLDRDCSETQGDNNMLVSLMQKPDKRNR
RLVKSLYIGINIFEVRSQFKGQRGKFPADFFNTNVPVAQTKNVLNVRTVVLLSRLKPGEY
LIVPSSFNPNETASFILSILSKVETQVHENSNDQDIVEIPKLMPTHNRADMDNKQTLFRQ
YSDQFEEVDAEQLQRILNETLLQGYAKKTQGFSLESCRSMVALMDTSITGKLNSAEFQHL
WRKVTVYKDIFLRSDVNRSGMLSLSQLRNAVTASGVRLSDSLLNLIALRYGGSSGNISLE
SFISLVLRMDRMAKIFRQLNQGGAISLRDNEWMYITMYA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcccggtgtgtgtatgagtataatgcaggagcgcaacaagcaagagggtgtt
gggagtcttgccaacccagagaaacacagcaaccaagactttcagcagcttaagcaatac
tgtttggccaggggagtgaggtacatcgatgagatgttccccccagaccataactccatt
ggtgatgggctactttcctctgattttatgagcagagtggtgtggttgagaccagcgaaa
attatacagaatccagattttattgttgatggactttcaaggtttgactttgggcaagga
atggttgaagattgctggtttcttgcttccattggggctttgacgttccagaaggacatc
ctggaacaagtagtacccctaaatcaaacctttaaagaggattactgtggcatattccac
ttcaggttctggaggtttgggaggtgggtggacgttgtgatcgatgacaagctaccaaca
gttgacggcaatctcattttcgttcattcaaaaactcccaatgagttttggcccgccttg
ctggagaaagcctatgccaaggtgtgtggctcctacgcagacatgaatttagggacccct
tcagaggctatgatggacttcactggcggggttcacatcacattcaaactcactgacgct
ccatcaaatctgtgggacctgctgttcagagctgtccaatccaaatctctgattgggtgt
ggcacacctcaaggggaaacatcagcgaacacggtggcacccaacggattagtgaggggt
catgcttacaccgtcacaggagttaataaacagatcttgagccaaggcaggccagttaat
ctaatccgcctcttcaacccctggggccggggagagtggaagggagactggagcgataag
tcatccatgtggcaaacagtgagtcctaacgatcggaagatgtgtctgtcagtgaaagag
gatggtgaattctggatgacaatggaagacttctgtaagcacttcacagatgtgactatc
tgctgtatgcgccctgattttcttgacggcaactctaaaggtctttggacacactccata
catgatggcagatgggttgcaggaaccactgctggtggctgcatgaatttcccaaacagt
ttctggaccaatccccagtatcgggtgaagattgagggattagacagggactgctctgag
acacagggggacaacaacatgttggtgtctctgatgcagaagcctgacaagagaaacaga
cgcctggtcaaaagtctctacatcggcatcaacatcttcgaggtgcgttcccaattcaaa
ggacagagggggaagtttcctgccgacttcttcaacaccaatgtgcctgtcgcccaaacc
aagaacgtcctgaatgttcgaacagtggtgctgctctctaggctgaaacctggtgaatac
ctgattgtgccatcatccttcaacccaaacgaaaccgcctccttcatcctgtccattctc
tccaaggtggagacccaagtccatgaaaattcaaatgaccaagatattgtggaaatcccc
aagctcatgcctactcacaatagagcagatatggacaacaaacaaactctgtttcggcaa
tattctgatcagtttgaggaggtggatgctgaacagcttcagaggattttaaatgaaact
ctcctccaaggatatgcaaagaaaacacaaggcttcagcttggagtcctgtcgaagcatg
gtggccttaatggatacatcaatcactggaaaactgaacagtgctgaatttcaacatcta
tggagaaaagttactgtgtacaaggatatcttcttacgttcagatgtgaaccgttctgga
atgttgtcattgagtcaactgaggaacgcagtcactgcttcaggggtcaggctgagtgat
agtctgctgaacctcattgctctgcgctacggtggatcttctggaaacatcagcctggag
agtttcatcagcctcgttctacgcatggaccgcatggctaaaatattcagacaactcaac
cagggaggggccatatctcttcgagacaatgagtggatgtacatcactatgtatgcataa
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