Salmo trutta (river trout): 115161982
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Entry
115161982 CDS
T08542
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
stru
Salmo trutta (river trout)
Pathway
stru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115161982 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115161982 (smarcd2)
03036 Chromosome and associated proteins [BR:
stru03036
]
115161982 (smarcd2)
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115161982 (smarcd2)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115161982 (smarcd2)
PBAF complex
115161982 (smarcd2)
GBAF(ncBAF) complex
115161982 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
115161982
NCBI-ProteinID:
XP_029568710
Ensembl:
ENSSTUG00000035118
LinkDB
All DBs
Position
2:complement(69417642..69441985)
Genome browser
AA seq
495 aa
AA seq
DB search
MASRGGFPATQINPSVNPMNAGHAGGGMRMPGIQQNSGFRAMNATPQYHQHPGMPPNRGI
SMGPIGGPGPSYGGGNMPLRIGMGQSAMDASRKRFLQQQQPQGGLGGPRRGKRRRMADKV
LPQRIRDLVPESEAYMDLLAFERKLDQTIARKRMEIQEAIKKPITQKRKLRIYISNTYTP
GKPEGEEAEKVSSWELRVEGKLLEDPGKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHR
MPTTQETDGFQVKRPGDVSVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRASIMQALW
LYIKNNKLQDSHEKEYINCNRYFRQILGCTRMRFSEIPMKLAGLLQHPDPIIINHMISVD
PNDQKKTACYDIDVEVDDPLKAQMNSFLSSTTNQQEIAALEMKIHETIESINQLKTQRDF
MLSFSNNPQDFIQDWLKSQSRDLKLMTDVAGNPEEERRTEFYQAPWVPEAVGRYIYSKVQ
QRRQELEQVLGIRLT
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagagggggctttccggctactcagataaaccccagtgttaaccccatgaac
gctggacatgcaggcggtggaatgaggatgccaggaatccaacagaattcgggtttccga
gccatgaatgccactcctcagtaccatcagcaccctggtatgccacccaacagggggatc
tcgatggggccaattgggggccctggaccctcttatgggggcgggaacatgcccttacgc
ataggaatggggcaatcagccatggacgcctcccgaaagcgattccttcaacaacaacaa
ccgcagggggggctgggaggcccaaggcgtggcaaaaggcgcaggatggccgacaaggtg
ctaccacagaggatccgagacctggttccagagtctgaagcctatatggacctgctggcc
tttgagaggaagctggaccagaccatcgcccgcaaacgcatggagatccaggaagccatc
aaaaagcccattacgcaaaagcgtaagttgaggatctacatatccaacacctacacaccc
ggcaagccagaaggcgaggaggcagaaaaagtgtcatcctgggaactaagggtggaggga
aaactccttgaggatcctgggaaacagaagaggaagttttcgtctttctttaagagtctg
gtcattgagctcgacaaggaactgtatggaccggataaccacttggtagagtggcacagg
atgcccaccacccaggagacagacggcttccaggtgaaaagaccaggggacgtgagcgtg
aaatgcaccctgctcctaatgctggaccaccagcccccacagtacaagctggacccaaga
ctggcccggctactaggtgtacacacccagacacgggctagcatcatgcaggcgctgtgg
ctctacatcaagaacaacaagctgcaggacagccacgagaaggagtacatcaactgcaac
cgctacttcagacagattttaggctgcacacgtatgcggttctctgagattcccatgaag
ctggctggcctgctgcagcatcctgaccccatcatcatcaatcacatgatcagcgtggat
ccgaatgaccagaagaagactgcgtgctacgacattgacgtggaggtggacgatcctctg
aaggcccaaatgaatagtttcctgtcctcaactaccaatcaacaggagatcgccgccctg
gagatgaagatccacgagaccattgagtctatcaaccagctgaagacccagcgagacttc
atgttgagcttcagcaacaacccgcaggacttcatccaggactggctcaagtcccagagt
cgagacctcaagttgatgacggacgtggcaggtaacccagaggaggagaggaggactgag
ttttaccaggccccctgggtaccagaagctgtgggccgatacatctactctaaggtgcag
cagagaagacaggagttggagcaggtgctgggaattcgactcacctga
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