Salmo trutta (river trout): 115162020
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Entry
115162020 CDS
T08542
Name
(RefSeq) homeobox protein Nkx-2.8-like
KO
K09347
homeobox protein Nkx-2.8
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115162020
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
115162020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Peptidase_M3_N
Motif
Other DBs
NCBI-GeneID:
115162020
NCBI-ProteinID:
XP_029568796
LinkDB
All DBs
Position
25:complement(11455512..11456855)
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AA seq
233 aa
AA seq
DB search
MAGAAKFSFSVRSILDLPENDAETVQPSPGISSSPYSSWMDSDRTPCLSSDESSLETGPD
STKSDESSLDSEAGKKCRVLFSKAQTFELERRFRQQHYLLAPEREQIAHLLRLTPTQIKI
WFQNHRYKMKRSRPDGVSQDINQPPMLRRVVVPILVRDGKPYQTGFIDTENGGCLGPTTC
LGTVFSFGYQSFQHPSPFALPQQYQHFASPAASRHTFAWRDFLNDSAQFTAFK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgcggcaaagttcagtttttccgtgaggagcatcctggatttgcctgaaaat
gacgcagagacagtgcagccctcccccggtatctccagctccccgtactcctcctggatg
gacagcgaccggaccccttgcctctcttcagatgagagcagcctggagactggcccagac
tctaccaagtcagatgagtcttctctggactcagaggcagggaagaagtgccgcgtgctc
ttctccaaggcccagaccttcgagctcgagaggcgtttccgtcagcagcactatctgtta
gcaccagagcgcgagcagatcgcccatctcctccgcctgacaccgacgcagattaagatc
tggttccagaaccaccggtacaaaatgaagaggtcacgaccggacggagtgtcacaagac
ataaaccaaccgcctatgttgcgcagagtagtggtacccatcctagttcgggatggaaag
ccgtatcagaccggtttcattgacacggagaatggaggctgtcttggaccgaccacatgc
ctgggtacagtcttcagttttgggtaccagtctttccagcatccgtcgccgttcgctcta
cctcaacaataccagcactttgccagcccggcagcatccagacacacctttgcttggaga
gactttctgaacgactcagctcaattcactgcttttaagtga
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