Salmo trutta (river trout): 115162022
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Entry
115162022 CDS
T08542
Name
(RefSeq) paired box protein Pax-1-like isoform X1
KO
K09382
paired box protein 1/9
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115162022
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115162022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_29
Motif
Other DBs
NCBI-GeneID:
115162022
NCBI-ProteinID:
XP_029568797
Ensembl:
ENSSTUG00000015263
LinkDB
All DBs
Position
25:11479059..11494401
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AA seq
296 aa
AA seq
DB search
MAVSLYVSMTPEPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSH
GCVSKILARYNETGSILPGAIGGSKPRVTTPSVVKHIRTYKQRDPGIFAWEIRDRLLADG
VCDKFNLPSVSSISRILRNKIGNLSQQSQYESSKQSSHQPPQPTLPYNHIYSYPTPIGAS
GTKVPTPPGMHSLPGHMAMHRIWPSSHSMQSGLPTVNSYVTAPSIPAYHPPTPVSPYMGY
SATTSAYVTGPTWQPPSGSALSHHSCDNIASSLAFKGMTAHHRDTLHPHTASASAL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctctatatgtttccatgacaccagagccagccttcggagaggtgaaccag
ctcggcggtgttttcgtcaacggcagaccgctacccaacgccatccggctgcggattgta
gagctcgctcagctgggcatcaggccttgcgacatcagcagacagctccgggtctcccac
ggctgcgtcagcaagatactggcccggtacaacgagaccggctctatactcccgggagcg
atcgggggcagcaagccacgggtcaccacgccgtcagtggtcaagcacatacggacatac
aagcagagggacccgggtattttcgcatgggagatccgggacaggctactggctgatggc
gtttgtgacaaatttaatctaccatctgtgagctccatcagtcggatcctccgcaacaag
attggcaatctatcccagcagagccagtatgagtccagcaagcagtcgtctcaccaacca
cctcagccaacgctaccatacaaccacatatactcgtatccgacccccatcggagcctct
gggaccaaagtaccgactcccccgggcatgcactccctccctggacacatggctatgcac
aggatatggccctcatcgcactcgatgcagagtggtttgcccacagtgaacagttatgtc
acagcacccagtatcccggcctaccaccctcccaccccagtgtcgccctacatggggtac
agcgccaccacgtcggcctatgtgaccggtcccacatggcagccgcccagtggcagtgct
ctctctcaccacagctgtgacaatattgcctcctcgctggccttcaagggtatgacagcc
caccaccgtgacaccctccacccccacaccgccagcgcctcagcactgtag
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