Salmo trutta (river trout): 115162041
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Entry
115162041 CDS
T08542
Symbol
pals1a
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
stru
Salmo trutta (river trout)
Pathway
stru04519
Cadherin signaling
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
115162041 (pals1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115162041 (pals1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115162041 (pals1a)
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
PDZ domain-containing proteins
MAGUK family proteins
115162041 (pals1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
MMR_HSR1
CSN4_RPN5_eIF3a
SH3_9
Motif
Other DBs
NCBI-GeneID:
115162041
NCBI-ProteinID:
XP_029568823
LinkDB
All DBs
Position
25:13253508..13313574
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AA seq
678 aa
AA seq
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MITTSYMNGHMTESDGRGGVEANQEEPQQWHREMAVDCPGDLGARTLPVRRSAQLERIRQ
HQEDLRRRKEEEGRNRQELDLTASIRLKKLSQNPKVGIDNPTFDPIEGPGGPLGLPPNLG
APTLLELEELLMSLKQVQHCLSDGQSQEDVELVLQLVQKTDFQKAFNIHNAVAQHMNRPS
PPFPHTDRAQGLAHEVQSMVHNSQHKEGLELNTLLSSPHVQAVLLAHDCVAEQEMQLEPL
TLDGPYEALTQWGGETVKIVRMEKARDIPLGATVRNDMDSVVISRIVKGGAAERSGLLHE
GDEVLEINGVEIRGKDVNEVFDILAEMHGTLTFILIPSSQNKPPPIKETVVHVKAHFDYD
PSDDPYVPCRELGLCFQKGDILHIISQDDPNWWQAYRDGDEDNQPLAGLVPGKSFQQQRE
AMKQTIEEDKEPEKSGKLWCAKKNKKKRKKLLYNVKQNDDYDSEEILTYEEMALYHQPAN
RKRPIALIGPPNCGQNDLRQRLLSSQPDRFGGAVPHTTRNRRDVEVSGRDYHFVSRQAFD
MDATAGKFIESGEFEKNLYGTSTDSVRQLINTGKICLLCLHTQSLKTLRSSDLKPYIIFI
APPSQERLRALLTKESKNPKPEELRDIIEKAREMEQNFGHLFDAAIVNTDQDKAYQELLR
LINKLDTEPQWVPSSWLR
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgataaccacatcctatatgaacggtcacatgactgagtcagacggaagaggaggagtt
gaggccaaccaggaggagccccagcagtggcacagggagatggcggtggactgcccgggg
gacctgggtgctcgtaccctgcctgtgaggcgctctgcccagctggagaggatccgtcag
caccaggaagacctgaggaggaggaaggaggaggagggcaggaacagacaggagctggat
ctgaccgcctccatacggctcaagaagctgtctcagaaccccaaggtgggcatcgataac
cccaccttcgaccccatcgagggccctggagggccactgggactgccacccaacctgggg
gcccccactctactggagttggaggagctgctgatgtccctgaagcaggtgcagcactgc
ctgtctgacggccagagccaggaggacgtggagctggtgctgcagctggtccagaagact
gacttccagaaggccttcaacatccacaacgctgtggcccagcacatgaacaggcccagc
ccgcccttcccacacacagaccgcgctcagggcctggcacacgaggtccagtctatggtt
cataacagccaacacaaggagggcttggagctcaacaccctgctctcctcaccacatgtc
caggcggtgcttctggcccatgactgtgttgcggagcaggagatgcagctggagcccctg
accctggacggcccctatgaggctctcacccagtggggaggggagaccgtcaagatagtc
cgcatggagaaggccagggacatcccactgggtgcgacagtgcgtaacgacatggacagc
gtggtaataagccgcatcgtgaagggcggggcggcggagcgcagcgggctgctgcatgaa
ggagacgaggttctggagatcaacggagtggagatcagagggaaggacgtcaacgaggtc
ttcgacatcctggccgaaatgcacggcaccctgaccttcatccttatccccagctcacag
aacaaacccccgcccatcaaagagactgtggtccatgtgaaggctcactttgattatgac
ccgtctgatgacccgtacgtgccgtgcagggaactgggcctgtgcttccagaagggagac
atcctccacatcatcagccaggacgaccccaactggtggcaggcctacagggacggagac
gaggacaaccagcccctggccgggctagtaccaggcaagagcttccagcagcagagagag
gccatgaagcagaccatagaagaggataaagagcctgagaagtcgggaaagctgtggtgt
gctaagaagaacaagaagaagaggaagaagctcctttacaacgtcaagcagaatgacgac
tacgacagtgaggagatcctgacctatgaggagatggcgctctaccaccagccagccaat
cgaaagcgacccatcgccctaattggtcctcccaactgtgggcagaacgacttgagacag
agactgctgtccagccagccagacagatttgggggagctgtcccacacacgacgcggaac
aggcgtgatgtggaggtgagtgggagagactaccattttgtctcccgccaggcctttgac
atggacgccactgccgggaagttcattgagtcgggagagtttgagaagaacttgtacgga
accagcaccgactctgtccgccaactcatcaacacgggcaaaatctgcctgctctgtctg
cacacacagtcgttgaagactctgcgtagctcagatctgaagccttacattatcttcatc
gctcctccctcccaagaacggttgcgagccctcctgaccaaagagagcaagaacccaaag
ccagaggagctgcgtgacatcatcgagaaggcccgtgagatggagcagaactttggccac
ctgtttgatgcagccatcgtgaacacagaccaggacaaggcctatcaggaactgctgaga
ctgatcaacaaactggacacagagccacaatgggtcccctcctcctggctacgctaa
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