Salmo trutta (river trout): 115162074
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Entry
115162074 CDS
T08542
Name
(RefSeq) neuronal PAS domain-containing protein 3-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115162074
Transcription factors [BR:
stru03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115162074
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
HLH
PAS_4
Motif
Other DBs
NCBI-GeneID:
115162074
NCBI-ProteinID:
XP_029568883
Ensembl:
ENSSTUG00000004837
LinkDB
All DBs
Position
25:complement(16511539..16832405)
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AA seq
960 aa
AA seq
DB search
MEESVEEAVVDAQFMSKFPHDPYWERPANTSSCSASRPKTLHLGGGQQHTSSPWLQALRK
EKSRDAARSRRGKENFEFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPP
WNLRMEGPPPNISVKAIGDQRRRIPSAVASEIFEPHLGSHILQSLDGFVFTLNKEGRFLY
ISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTATEDGASS
ASSSSHAATPEPVESTSPTLLPPDNILERSFFIRMKSTLTKRGVHIKSSGYKVIHVTGRL
RIRMALTHSRSVPIQIMGMVVVAHALPPPTINEVRIDCQMFVTRVHMDLNIVYCENRISD
YMDLMPVDIVGKRCYQFIHAEDVDGIRHSHLDLINKGQCVTKYYRWIQKNGGYIWIQSSA
TIAVNAKNGNEKNIIWVNYVLSNPEYKDTPMDIAQLPNLPEKASESSETSDSESESKDNS
DHNENSKWDRKGNQTENTEDPETESKKQQQGQSSSEQEMRRQEEGDSSSNPESQESEDDL
EPSDCEVETKEGRLGRLEDLHIKVEHYGDGNGGVELHDSPSSSSEEEDDDDDEEDDGSFK
DCDSATETLAAPAASKQQKRKKRRKKQKWDGSRPKRLCLSSATHSSNAFVGAVPVLPHPS
PASASVLKIKTEMSEPINFDNDSIIWNYPPNREISRNESPYSMTKPVPAHDTFPSPQPGS
LQVSIPDSVLTPPGTEGGSGGAGTRKGVPPSFSGYSSAPSSASSAVSLVPPSGSGSSSDP
LSPPLSASPRDNQQGQSTPTTSGTSLLYTSNLEALQRLQAGNVALPLVQRVTGTLATTST
AASRVYTTGTIRYAPADVTLAMQAGANLLPNNVAHAMNFVDVNGSPGFGIDPKTPMEMLY
HHVHRLNMAGPFGGTMSGASLTQMPAANVFTTAEGLFSTLPFPVYSNGIHTTQTLERKDD
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatcagtggaggaggccgtagttgatgcccaattcatgtccaaatttccccac
gacccttactgggagaggcctgctaataccagctcctgttcagcctctaggcccaagaca
ctccaccttggaggagggcaacaacatacctcatcaccatggttgcaggctctgaggaag
gagaagtcccgggatgcggctcgctcgcggcgggggaaggagaactttgagttctacgag
ctggctaagatgctgcccctgcccggggccatcaccagccagctggacaaggcttccatc
atccgcctcaccatcagttaccttaagatgagggacttcgccaaccagggggacccgcca
tggaacctgcgcatggaaggcccacctcccaacatctccgtcaaagctataggagatcag
cgaaggaggattcccagtgcggtagcctcagagatcttcgagccacacctcgggagccac
atattgcagtccctggatggatttgtatttacactaaacaaggagggaaggtttttgtac
atctctgagacggtgtctatatacctggggctttcacaggtggagctgacaggaagtagt
gtgtttgactacgtccaccccggtgatcatgtggagatggcagagcagctgggcatgaag
ctgcccccggggcgaggcctcctttctcagggcaccgccaccgaggatggcgccagctct
gcctcctcctcttcacacgcagcgacccccgagccagtcgagtcgaccagccccaccctg
ctgcccccagacaacattctagaacgctccttcttcatccgtatgaagtccacactgacc
aagagaggtgtccacatcaagtcttcagggtataaggtaatccatgttacaggcaggctg
aggatccgtatggcattgacccacagtcggtcggtacccattcagatcatgggcatggtg
gtggtagcccacgccctccccccccccaccatcaacgaggtgcgcatagactgccagatg
tttgtcaccagggtccacatggacctcaacattgtctactgtgagaatagaattagcgac
tacatggacctgatgccagtggacatcgtagggaagaggtgttaccagtttattcatgcg
gaggatgtggatggcatccggcacagccatttagacttgataaacaagggccagtgtgtg
accaagtactaccgctggatccagaagaacggtgggtacatctggatccagtccagtgcc
accatcgccgtcaatgccaagaacggcaatgaaaagaacataatctgggtcaactacgta
ctcagtaatccagagtacaaggacacgcccatggacatcgcccagctacccaatcttcca
gagaaagcctcagagtcttcagagacatccgactctgagtccgagtccaaggacaactct
gaccacaacgagaactccaagtgggacaggaaggggaaccagactgagaacacagaggac
ccggaaacagagagtaaaaagcagcagcagggccaatcgtcctcagagcaggagatgagg
cgtcaggaggagggagacagctcctccaacccagagagccaggagagcgaggacgatctg
gagcccagcgactgtgaggtggagaccaaggagggcagactgggccggctggaggacctg
cacatcaaggtggagcactatggagacggaaacggaggggtggagctgcatgactcgccg
tcctcctcctctgaagaggaagatgatgatgacgatgaggaagatgacggcagctttaaa
gactgtgacagcgccaccgagactctcgccgcccccgctgccagtaagcagcagaagcgt
aagaagaggaggaaaaagcagaaatgggacggtagtcgtcctaaacgcctgtgcctctcc
tctgccacccacagctctaacgccttcgttggggctgtccccgtcctgccgcacccctcc
cctgccagtgcctctgtgctcaagatcaaaacggaaatgtccgagcccatcaacttcgac
aatgacagcatcatctggaactacccacccaacagagagatctccaggaacgagtctccc
tacagcatgacgaagcccgtcccagcccacgataccttcccctccccacagcctggcagt
ctgcaggtctccatcccagactcagtgctcactcccccaggaacagaggggggcagtggg
ggcgcaggtaccaggaagggcgtacccccctccttcagcggttatagcagcgccccctcc
tcggcctccagcgccgtcagcctggtccctccctccggctctgggtcctcctccgacccc
ctgtccccgcccctctcggcctcgccgcgcgacaaccagcaaggtcagagcacccccacc
acgtccggcacctccctgctgtacaccagcaacctggaggccctgcagaggctgcaggcc
gggaacgtggctcttccactggtccagcgggtcactggcaccctcgccacgaccagcact
gctgcctcacgggtctacaccactggcaccatccgctacgcccccgctgacgtcactctg
gccatgcaggcaggcgccaacctgctgcccaacaatgtggcccatgctatgaactttgtg
gatgtcaacggtagccccggcttcggcatcgaccccaagacgcccatggagatgctgtat
catcacgtccaccggctcaacatggctggcccttttggtggtaccatgtctggcgccagc
ctcacccagatgccagcagccaatgtattcaccacggccgagggactgttctccactctt
ccatttcctgtctacagtaacgggatacacaccacacaaactctggagcgcaaagatgat
tag
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