Salmo trutta (river trout): 115162121
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Entry
115162121 CDS
T08542
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5-like
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115162121
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
115162121
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
C2-set_2
fn3
Ig_DSCAM-DSCAML_C
C2-set_3
Ig_5
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-GeneID:
115162121
NCBI-ProteinID:
XP_029568968
Ensembl:
ENSSTUG00000009823
LinkDB
All DBs
Position
25:complement(18860718..18903785)
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AA seq
790 aa
AA seq
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MEKLLVCLLVIGMAVKAQICPKRCVCQILSPNLATLCAKKGLLFAPPNIDRHTVELRLAD
NFVTSIKRKDFANMTRLQDLTLSRNTISFITPHAFADLENLRALHLNSNRLTRIANDTFS
GMSKLHHLILNNNQLTLIHLGAFNDLLALEELDLSYNNLESIPWEAIQRMTSLATLSLDH
NMIDYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMNSPSFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPQHLSGRYFWSIPEEEFLCEPPLITRHSHEMRVLE
GQRVVLRCKARGDPEPAIHWISPEGKLVANSSRTLVYTNGTLDILISTVKDTGSFTCISS
NPAGEAHQTVELLIIKLPHISNSTNNIQEPDPGSSDISTSTRAGANGSNHTGDTKTSTDK
RVVIAEATSSTALIKFNFQRNIPGIRMFQIQYNGSYDDSLVYRMIPPTSKNFLVNNLAAG
TSYDLCVLAIYDDGITSLTATRVVGCVQFTTESEYLRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNTSDSGKGTLVTNVHSQTNGAQSQGCTVTPSVSKQAMGGSDGGG
GGCLKAVGHASDTLTHSSETSLPDCSTATSQVTQSWNTPGSSGSLKPKRKPAPKPYAAAA
TPEPNIEAFPNAETQNTNRNNSTALQQPSAPVFHSPLPFSRVKDTPILRRAHPRPSSKYL
TLPVEGVRAKRRYSLNEDSSKQNCYVGTTQFGNMWSKRSMSMNGIVLQQEDIDSVKATYS
SSEWILESTV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgctggtctgtctgttggttatcggaatggcagtgaaggcccagatctgt
ccgaagcgctgtgtctgtcaaatactatctcccaacctcgcaaccctctgtgccaaaaaa
gggctcctctttgcccccccgaacattgacaggcacactgtggagctgcggctggccgac
aacttcgtcaccagcatcaaaaggaaagactttgccaacatgaccaggctgcaggacctt
accctgtccaggaataccattagcttcatcacgccgcatgcatttgctgacctggagaac
ctccgcgccttgcacctgaacagcaaccgtctgacccggatagccaatgacaccttcagc
ggcatgtccaaactgcaccacctcatcctcaacaacaaccagctgacgttgatccacctg
ggggcctttaatgacctgctggccctggaggagctggacctgtcctacaacaacctggag
tccatcccctgggaggctatccagaggatgaccagccttgccaccctcagcctggaccac
aacatgatcgactacattcctgaggggaccttctctcttctccaaaagctcaaccgcttg
gacgtgacctctaataagttacagaagcttcctcctgatcctctgttccagcgggcccag
gttttggccacgtctgggatcatgaactctccctcgttcgcgctgagctttggtgggaac
ccactgcactgcaactgtgagctgctgtggttgaggcgcctgagccgagaggatgatctg
gagacatgcgcctcaccgcagcatctctctggacgctacttctggtctatacctgaggag
gagttcctgtgtgaacctcctctcatcacccggcactcccatgagatgcgggtgctggaa
ggccagagggtggtcttgaggtgcaaggcccggggggaccctgagcctgccatacactgg
atctccccagaggggaagctggtggcaaactcctcccgaacgcttgtgtacaccaacggc
accctggatattctgatcagcacagtgaaggacacaggatccttcacctgcatctcgtcc
aacccggcaggtgaggcacatcagactgtggagttgctgattatcaaactcccacacatc
tccaacagcaccaacaacatccaggagcctgaccctggctcctcggacatctccacatcc
accagggctggggccaacggcagcaaccacactggggacaccaaaactagcacagataaa
cgggtggtcatcgctgaggccacatcctccactgcactgatcaagttcaacttccagagg
aatatacctgggatccggatgttccagattcagtacaatggcagttatgatgactctctc
gtttacagaatgattccccccacaagcaaaaacttcctggtcaacaacctggctgctggg
acgtcgtacgacctgtgtgttctggccatctacgacgacggtatcacctccctcaccgcc
acccgcgtggtgggctgcgtccagttcaccaccgagtctgagtacctgcgctgtcatttc
atgcagtcccagttcctgggaggcaccatgatcatcatcatcggcggcatcatcgtggcc
tctgtcctcgtcttcatcatcatcctcatgattcgctacaaagtctgcaacaccagtgac
tcgggcaaaggcacccttgtcaccaacgtccactcacagaccaacggggcgcagtctcag
gggtgcacagtcacaccctctgtgtccaagcaggccatgggagggtcagacggagggggt
ggaggatgtctaaaggctgttggccacgcgtcggatacgctaacgcactcgtccgagacc
tctctcccagactgctctactgctacgtcccaggtgacccaaagctggaacacacctgga
tcctcagggtctctgaagccaaagcgcaagcctgcaccaaagccctacgctgctgctgcc
acccctgagcccaatatagaggccttccccaatgctgagacccagaataccaaccgcaac
aactccacggctctgcagcagccgtccgccccagtattccactccccgctacccttctcg
cgtgtcaaggacacccccatattgagacgtgcacaccccagaccctcctccaagtacctg
accttaccggtggaaggggtgagggccaaacgtaggtactctctaaacgaggactcgtcc
aagcaaaactgctacgttgggacaacacaatttgggaatatgtggtctaagcggagtatg
tccatgaacgggattgtacttcaacaggaagatatagacagtgtgaaggccacctattcc
agttcagagtggattctagaaagcactgtgtga
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