Salmo trutta (river trout): 115162138
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Entry
115162138 CDS
T08542
Symbol
psmc1
Name
(RefSeq) 26S proteasome regulatory subunit 4
KO
K03062
26S proteasome regulatory subunit T2
Organism
stru
Salmo trutta (river trout)
Pathway
stru03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
115162138 (psmc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
stru03051
]
115162138 (psmc1)
Proteasome [BR:
stru03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
115162138 (psmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_22
DUF815
nSTAND3
AAA_16
AAA_3
AAA_5
RuvB_N
AAA_28
ATPase
AAA_14
AAA_25
NPHP3_N
RNA_helicase
TIP49
AAA_33
NACHT
IstB_IS21
NB-ARC
Mg_chelatase
AAA_7
Viral_helicase1
AAA_24
Parvo_NS1
ABC_tran
SLFN-g3_helicase
Zeta_toxin
TsaE
Motif
Other DBs
NCBI-GeneID:
115162138
NCBI-ProteinID:
XP_029569013
Ensembl:
ENSSTUG00000015056
LinkDB
All DBs
Position
25:complement(19875576..19880659)
Genome browser
AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPIPTRVGKRKKKSKGPDAASKLPLVTPHTHCRL
KLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGNLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDQQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTLLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTVADDVILDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagtcagagtggaggacatggacccggaggaggaaagaaagacgacaaggat
aagaaaaagaaatatgaaccaccaatccccaccagggttgggaagaggaagaagaagagc
aagggacctgatgctgccagcaagctacctcttgtaactccgcacacacactgcaggctg
aaactgctgaagcaggagaggatcaaagactacttgctgatggaggaggagtttatcagg
aaccaggaacagatgaaacccctggaggagaaacaggaggaggagaggtctaaggtagat
gatctgagagggactcccatgtcagtggggaacctggaggagatcattgatgacaaccac
gccatcgtttccacgtctgtgggctctgagcactatgtcagcatcctctccttcgtagac
aaagatctgctggagccgggctgctccgtccttctcaaccacaaagtccatgccgtcatt
ggggtcctgatggatgacaccgatcctctggtgaccgtgatgaaggtggagaaggctcca
caggaaacatacgctgacattggtggactggaccagcagatccaggaaattaaggagtct
gtggagctccctctgacccatccagagtactatgaagagatgggcatcaagcctcctaaa
ggagtcattctgtatggagcaccagggacagggaagaccctactggccaaagcagtggct
aaccagacgtcggcgaccttcctgcgtgtggtgggctctgagctgattcagaagtaccta
ggggacgggcccaagctggtccgagagctgttcagggtggctgaggaacacgcaccctcc
atcgtcttcatcgacgagatcgacgctatcgggactaagaggtatgactctaactcagga
ggggagcgagagatccaaaggactttgctggagcttctcaaccagctggatggctttgac
tccagaggagatgttaaggtcattatggccaccaacaggatagagaccctggaccctgca
ctcatcagaccaggccgtattgaccgaaagatagagttccccctgccggatgagaagacc
aagcgaaggatcttccagatccacaccagcaggatgactgtggcagacgatgtgatcctg
gacgacctgatcctagccaaggatgacctctccggagctgacatcaaggccatttgtaca
gaggcagggctgatggctctgagagagcgcaggatgaaggtgactaatgaggactttaag
aagtcaaaggagaacgtgctgtacaagaaacaggaagggacaccagagggcttgtacctc
taa
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