Salmo trutta (river trout): 115162184
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Entry
115162184 CDS
T08542
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
stru04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115162184
04082 Neuroactive ligand signaling
115162184
04519 Cadherin signaling
115162184
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115162184
Ion channels [BR:
stru04040
]
Ligand-gated channels
GABA-A
115162184
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
115162184
NCBI-ProteinID:
XP_029569104
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All DBs
Position
25:complement(23392648..23450320)
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AA seq
486 aa
AA seq
DB search
MCTALDRGRWGIFCLFLMVAMVCGAQSANEPSNMSFVKATVDKLLKGYDIRLRPDFGGAP
VDVGMSIDIASIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADSLWVPD
TYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWKGDNSVTGVENIELPQFSIIDYHIQSTKAVFATGSYPRLSLSFKLKR
NIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIP
YVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAQTNNENKSRLESNK
VQVDAHGNILLTNLEIRNEMGGMGGMAGMTGAEMIGALNDPRATMFSYDSASIQYRKPMA
SRDLYGRPALDRPVGHKKSRLRRRASQLKVKIPDLTDVNAIDKWSRVIFPIAFTFFNLVY
WLYYVH
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacggctttggaccgcggacgctgggggattttctgtcttttcctcatggtcgcc
atggtctgcggcgctcaaagcgccaacgagcctagcaacatgtcatttgtgaaagcgacc
gtggacaaactgctgaaggggtatgacattcgtctgaggcctgattttggaggtgcccct
gtggacgttggcatgagcatagatatcgccagtatcgacatggtttcggaagtcaacatg
gattacaccatcaccatgtacttccagcagtcctggagggacaagcgcttgtcctacaca
gggattcccctcaacctgacgctggacaacagggtggctgactcgctctgggtccctgac
acctacttcatcaacgataagaagtcctttgtgcacggggtcacagtgaagaacagaatg
atccgactccatcctgacggaactgtgctctacggcctgaggatcaccactactgcagct
tgcatgatggacttgcgtagatacccactggatgagcagaactgcaccctggagatcgag
agctatgggtacaccactgatgacatcgagttctactggaaaggtgataattcagtgact
ggggtggagaacatcgaactgccccaattctctataatagactaccacatccaatccaca
aaagcagtgtttgctacaggctcctacccgaggctctctctgagttttaagctgaagagg
aacattggctacttcatcctacagacctacatgccctcgaccctgatcaccatcctatcc
tgggtctccttctggatcaactatgacgcgtctgcggccagagtcgctttaggcataact
actgtgctgaccatgaccaccatcaacacccacttgagagagactttacccaaaatcccc
tatgtcaaggctatagacatctacctgatgggctgcttcgtgttcgtcttcctggccctg
ctggagtacgcgttcgttaactacatcttcttcggacgggggcctcacttgcagaaaaag
gtggcagagaaagcagctcaaaccaacaatgaaaataagagccgattggagagtaacaaa
gtgcaggtggacgcccacggcaacatcctcctgaccaatctggagatccgtaacgagatg
ggtgggatgggtggcatggccgggatgaccggggccgagatgataggggctctcaacgac
ccgcgggccaccatgttctcctacgacagcgccagcatacagtaccgtaagcccatggcc
agccgagacctgtatggtcgaccggccctcgaccggcctgtcggccacaagaagagtcgt
ttgaggaggagggcgtcgcagctcaaagtcaagatccctgacctgacggacgtcaacgcc
atagacaagtggtcccgcgtcatcttccctatcgccttcaccttcttcaacctggtctac
tggctgtactacgtccactag
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