Salmo trutta (river trout): 115162185
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Entry
115162185 CDS
T08542
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
stru04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115162185
04082 Neuroactive ligand signaling
115162185
04519 Cadherin signaling
115162185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115162185
Ion channels [BR:
stru04040
]
Ligand-gated channels
GABA-A
115162185
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
115162185
NCBI-ProteinID:
XP_029569105
UniProt:
A0A674BK87
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Position
25:23491755..23525551
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AA seq
461 aa
AA seq
DB search
MRERWDLSHYLAVFFSLMVLCQSRSIVESSAYASEAFKNNITLFTRILDRLLDGYDNRLR
PGLGDRVTEVKTDIYVTSFGPVSDTDMEYTVDVFFRQSWIDERLKFNGPMNILRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKLLRIMEDGTLLYTMRLTVQAECPMHLEDFPMDSH
SCPLKFGSYAYTMAEVTYIWTQNASVSVEVAPDGSRLNQYHLQGQTGGTETIKSSTGEYT
VMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNVKQKKEA
SAMKKNNSYAVAVANYAPNVTKDQSGLPTISKSATSDPNKAKPEAKPEVKPEQNKKTFNS
VSKIDRMSRIMFPVLFGGFNLVYWATYLNREPVIKDMVPSK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagagagcgatgggacttatcgcattatctagcggtgttcttctcgttgatggtactg
tgtcagtcaagatcaatagtggaatcgtctgcatatgcttcagaggccttcaaaaacaac
atcactctgttcaccaggatcttggaccgccttctggatggctatgacaaccgattacga
cctggacttggagatcgggtgacagaggtgaagactgacatttatgtcacaagtttcggt
ccagtgtcagacacagacatggagtacactgtggacgtgttcttccgtcagagttggatt
gacgaacggctgaagttcaacgggcccatgaacatcctgcggctgaacaacctgatggcc
agtaagatctggacgcccgacacctttttccacaacgggaagaaatctgtggctcacaac
atgaccatgcccaacaaactgctcaggatcatggaggatggaacactgctttacactatg
aggttaacggtccaggcagaatgtcccatgcacctcgaagatttccccatggattcccac
tcctgtccactgaagtttggcagctatgcctacacaatggccgaggtgacgtacatttgg
acccaaaacgcatcagtgtcagtggaggtagcaccagatggatccagactgaaccagtat
caccttcagggacaaactggggggacagagaccattaaatcaagcactggtgaatacact
gtcatgacggcccacttccacctgaagaggaagattggctactttgtgatccagacctac
ctgccctgcatcatgaccgtcatcctgtcccaggtctccttctggctcaaccgagagtct
gtacccgccagaactgtctttggtgtgaccactgtgctcacaatgacgacgctcagtatc
agtgcccgtaactctctgccgaaggtggcctatgccacggccatggattggttcattgcc
gtgtgctacgccttcgtgttctctgccctcatcgagtttgctaccgtcaactacttcacc
aaaagaggctgggcctgggatggcaaaagtgtggtcaacgtcaagcagaagaaggaggcg
tccgccatgaagaagaacaactcctatgccgttgctgtggcaaactatgccccgaacgtc
accaaggaccaaagtggtctgcccaccatctccaagagcgccacctctgaccccaacaag
gccaagccagaggccaagccagaggtcaagccagagcagaacaagaagaccttcaacagc
gtcagcaaaatcgaccgtatgtcccggattatgttccccgtgctcttcggtggtttcaac
ctggtctactgggccacctacctgaacagagaaccagtcataaaagacatggtcccgtcc
aaatga
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