Salmo trutta (river trout): 115162291
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Entry
115162291 CDS
T08542
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115162291 (msh4)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Meiosis-specific proteins
Others
115162291 (msh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_14
AAA_22
nSTAND3
ATPase_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
115162291
NCBI-ProteinID:
XP_029569313
Ensembl:
ENSSTUG00000005789
LinkDB
All DBs
Position
25:27260672..27267346
Genome browser
AA seq
913 aa
AA seq
DB search
MLRSSTEELTPGNTTDSGRSSVLSPLDHRGKQSGPVSLSRGSTSAGLLTRVTHSFRGGRT
SSSVPPSSGSSFCGTPRLMGGTPRLGRTPGLAGALGIHPAWTPQTEPSVTTSCSSVISAT
AASVIVAVVEGRGLARGEIGMASINLKCPELVLYQFADTGTYAKVITKLHILVPLEILMP
DTASEKGKGTKLYSLITENFQSVAFTAIQRKYFNERKGLEYIQQLSAPEYSTVIMEVQAK
YYCLAAAAALLKYFEFIQNSIYAPKSLKVSFKGSEHTAMIDSTSATNLELVVNNRDHRSE
HTLLGVLNYTKTPGGGRRLRSNILEPLLDVDTINIRLDTIQELLQDEELFFGLKNAIGHF
LDIDQLLSVLVQIPKQETVQVAESKITHVIQLKHTLELVPPLRMVLKNCNTALLKAYSSS
LEDNRFDMILEQIKSVINDDTSYMKGSLNMRTQKCYAVRPNINEFLDIARRAYTEIVDDI
AELVDQVGEKYALPIRTSFSTARGFFIQMKLEGVALPDGELPADFIKVTKHKNNYSFTTA
DLMKMNDRCDEALREIFHMSYVVVCQLLNTVHEHIHCLYKLSDAVSMLDMLLSLANACTI
SDYVRPEFTDTLAIKQGRHPILERIVGQQPVSNNSYISEGSNFVIITGPNMSGKSTYLKQ
VALCQIMAQIGSFVPAEYASFRIADQIFTRIGVDDDFETNSSTFMVEMKEVSYLIHNVSD
RSLIIIDELGRGTSAEEGVGICHSVCEFLLSLRLFTCWSQAFTLFATHFLELCELETLYP
NVENQHMEVQHTRTGDTGTERVIYTFLLSRGSSEERNYGLRAAEMTALPLTIIQEAKAIS
SKVSQQLLAKHHSDSETQRQRAVYHLATRLLQTARNSRLDPDSLRIYLKGLKRHYEAELQ
VIGEPVSMETEEE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgaagtagcacagaggagttgacacctggcaacaccacggactccggaagaagc
tcggtgctgtcacctttggatcatcgaggcaaacaaagtgggcctgtgtcactcagccgt
ggatcaacatctgcagggctgctcacaagagtgactcacagcttcagagggggaaggaca
agttcatctgtcccaccatccagtggctcctcattctgtgggacccccagactcatgggg
gggacccccagactggggaggaccccaggcttagctggggctctaggcatacatcctgca
tggacgccacagactgaaccctctgtgaccactagctgctcctccgtgatatcggccact
gctgcctctgtgattgtggcggtggtagaagggcgtgggttggccaggggggagattggc
atggccagtatcaacctgaaatgcccagagctggtcctctatcagtttgcagacactggg
acctatgccaaggttatcaccaagcttcacatactggtgccactcgagatactaatgcca
gacactgccagtgagaaaggcaaagggaccaagctatacagcctaatcacagaaaacttt
cagtcagtagctttcactgcaatccagagaaagtacttcaatgagagaaaagggctggaa
tacatccagcaactgtctgcaccagagtacagcactgttattatggaggtgcaagctaaa
tactattgcctggcagctgcggctgctttactgaaatactttgagttcattcagaactcc
atctatgcaccaaagtcactgaaagtaagcttcaaagggagtgagcatactgccatgatc
gactcaacgtctgccactaacctggagctggttgtcaacaacagggaccacaggagtgaa
cataccctgttaggggtgctgaactacaccaaaacccctggtgggggaaggaggctgcgc
tctaacattctagagcccttgctggatgtcgataccataaacatacgtctagacaccatt
caagagctgttacaggacgaggagctcttctttggcttaaagaacgccattggacatttt
ctggatatagaccaactgctctctgttcttgtccagatccccaagcaggaaacggttcaa
gttgcagagtcaaagattacacatgtgattcagctgaagcatactctggagttggtacca
ccactgaggatggtgctgaagaactgtaacactgctctgctgaaggcttacagcagctca
ctggaagacaacaggtttgacatgatcctcgagcagatcaagtcagtgattaatgatgac
accagctacatgaaggggagcctcaacatgcgcacacagaagtgctacgctgtgcgcccc
aacatcaacgagttcctggacatcgcccggcgagcctacactgagattgtggatgacatt
gcagagctggttgaccaggtgggggagaagtatgccttgccgatacgcaccagcttcagc
acagctcgaggcttcttcatccagatgaaactggagggggtagctttacctgatggggaa
ctcccagctgacttcatcaaggtgacgaagcacaagaacaactacagcttcaccacagca
gacctgatgaagatgaatgatcgctgtgatgaggccctgagggaaatatttcacatgtcc
tatgtggtggtgtgtcagctgctgaatacagttcatgagcatatccactgtctttacaaa
ctgtccgatgctgtgtccatgctagacatgctgctgtcactagccaatgcatgcaccatc
tcagactatgtgcgtcctgagttcacagacacactggccatcaagcagggtcgtcacccc
attctggagcgcatcgttggccagcagcccgtgtccaacaacagctacatctctgagggc
agcaactttgtcatcatcactgggcccaacatgagcggcaagtccacctacctcaaacag
gtggcgctgtgccagatcatggctcagataggttcctttgtccctgctgagtatgcctcc
ttccgcattgctgaccagattttcaccagaatcggggtggatgatgactttgagacaaac
tcctcaacctttatggtggaaatgaaggaggtctcatatttaatccataatgtgagtgat
aggtctctcattattatagacgaacttgggcgtggtactagtgctgaggagggtgtcggc
atctgtcactctgtctgcgaattcctccttagcctcaggctgtttacctgctggtcccag
gcgttcacgctgttcgccacacacttcctggaactatgtgagctggagacattgtacccc
aatgtggaaaaccagcacatggaggttcagcacacccgcactggtgacacaggtacagag
cgtgtcatctataccttcctgctgagccgtggaagctctgaggaaagaaactacggtctg
agggctgcagagatgactgcactgcctttaaccataatccaagaagcaaaggcgattagc
tctaaagtcagccaacagctcttggccaagcaccacagtgattcggaaacgcaacggcag
agagcagtgtaccacctggccactcggctcctgcagacagccaggaactccaggctggac
cctgacagcctgcgcatctatctgaagggcctgaagagacactatgaagcagagctgcag
gtcataggagagcctgtgtccatggagacagaggaagaatga
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