KEGG   Salmo trutta (river trout): 115162464
Entry
115162464         CDS       T08542                                 
Name
(RefSeq) claudin-20-like isoform X1
  KO
K06087  claudin
Organism
stru  Salmo trutta (river trout)
Pathway
stru03272  Virion - Hepatitis viruses
stru04382  Cornified envelope formation
stru04514  Cell adhesion molecules
stru04530  Tight junction
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    115162464
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    115162464
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    115162464
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    115162464
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:stru03037]
    115162464
   04147 Exosome [BR:stru04147]
    115162464
   04515 Cell adhesion molecules [BR:stru04515]
    115162464
Cilium and associated proteins [BR:stru03037]
 Other cilia and associated proteins
  Stereociliary proteins
   115162464
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   115162464
  Exosomal proteins of colorectal cancer cells
   115162464
Cell adhesion molecules [BR:stru04515]
 Immunoglobulin superfamily
  L1 family
   115162464
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Clc-like tRNA_NucTran2_2
Other DBs
NCBI-GeneID: 115162464
NCBI-ProteinID: XP_029569642
Ensembl: ENSSTUG00000003398
LinkDB
Position
25:33682276..33691892
AA seq 298 aa
MCGSIGAGTEGLSRRLLPALAPESSTAVWGEEPRCLAGAGWMVPGGGGGHGRRRRMASTG
MQIFAFVLALLGIMGAMVATLLPNWKVSADVGSNIITAISQMQGLWMDCTWYSTGMFSCT
LKYSVLSLPAYLQTARTTMVLSCVMAAMGLCLASLGLKCTRWGGGRRSKRHAAIASGGCF
IAAGFLCLVPASWFTKEVITNFLDRSVHESNKFEPGGAVYVAFLSAGFLFVGGSIFCVSC
SGKRPGHQEMILLPPPDKLLLQQQQHLLQQQQQDQLQHQYCSLSPLDNKTGYSLQDYV
NT seq 897 nt   +upstreamnt  +downstreamnt
atgtgtgggtccattggagccggcactgagggactgagtcgtcggctgctgccagctcta
gcaccagaatcctctacagccgtctggggtgaggagccgaggtgcctggctggggctggg
tggatggtgcctggaggaggagggggccacggcagaaggaggagaatggcatccacaggc
atgcaaatctttgccttcgtcctggcgctgctgggaatcatgggggccatggtggctacg
ctgctgcccaattggaaggtgagtgccgacgtgggctccaacatcatcacagccatctcc
cagatgcaggggctgtggatggactgcacctggtacagcaccggcatgttcagctgcacc
ttgaagtactcagtgctgtcgctgcccgcctacctgcagactgcccgcaccaccatggtg
ctgtcctgtgtgatggctgccatgggcctgtgcctggcatccctggggctcaaatgtact
cgctgggggggcggccggcgctccaagaggcacgcagccatcgccagcgggggctgcttc
atcgccgccggcttcctgtgcctggtgcccgcttcctggttcaccaaagaggtcatcact
aacttcctggaccgcagcgtgcacgagagcaataagtttgagcccgggggcgccgtgtac
gtggccttcctgtcggcaggcttcctctttgtgggggggtccatcttctgtgtgtcgtgc
tcggggaagaggcccggccaccaggagatgatcttgctgccgccccctgataaactctta
ctgcagcagcaacagcacctcctacagcaacagcagcaggaccagctccagcaccagtac
tgctccctctccccactagacaataaaacaggctacagtctgcaggactatgtgtag

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