Salmo trutta (river trout): 115162464
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Entry
115162464 CDS
T08542
Name
(RefSeq) claudin-20-like isoform X1
KO
K06087
claudin
Organism
stru
Salmo trutta (river trout)
Pathway
stru03272
Virion - Hepatitis viruses
stru04382
Cornified envelope formation
stru04514
Cell adhesion molecules
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
115162464
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115162464
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115162464
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115162464
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115162464
04147 Exosome [BR:
stru04147
]
115162464
04515 Cell adhesion molecules [BR:
stru04515
]
115162464
Cilium and associated proteins [BR:
stru03037
]
Other cilia and associated proteins
Stereociliary proteins
115162464
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
115162464
Exosomal proteins of colorectal cancer cells
115162464
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
L1 family
115162464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
tRNA_NucTran2_2
Motif
Other DBs
NCBI-GeneID:
115162464
NCBI-ProteinID:
XP_029569642
Ensembl:
ENSSTUG00000003398
LinkDB
All DBs
Position
25:33682276..33691892
Genome browser
AA seq
298 aa
AA seq
DB search
MCGSIGAGTEGLSRRLLPALAPESSTAVWGEEPRCLAGAGWMVPGGGGGHGRRRRMASTG
MQIFAFVLALLGIMGAMVATLLPNWKVSADVGSNIITAISQMQGLWMDCTWYSTGMFSCT
LKYSVLSLPAYLQTARTTMVLSCVMAAMGLCLASLGLKCTRWGGGRRSKRHAAIASGGCF
IAAGFLCLVPASWFTKEVITNFLDRSVHESNKFEPGGAVYVAFLSAGFLFVGGSIFCVSC
SGKRPGHQEMILLPPPDKLLLQQQQHLLQQQQQDQLQHQYCSLSPLDNKTGYSLQDYV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgggtccattggagccggcactgagggactgagtcgtcggctgctgccagctcta
gcaccagaatcctctacagccgtctggggtgaggagccgaggtgcctggctggggctggg
tggatggtgcctggaggaggagggggccacggcagaaggaggagaatggcatccacaggc
atgcaaatctttgccttcgtcctggcgctgctgggaatcatgggggccatggtggctacg
ctgctgcccaattggaaggtgagtgccgacgtgggctccaacatcatcacagccatctcc
cagatgcaggggctgtggatggactgcacctggtacagcaccggcatgttcagctgcacc
ttgaagtactcagtgctgtcgctgcccgcctacctgcagactgcccgcaccaccatggtg
ctgtcctgtgtgatggctgccatgggcctgtgcctggcatccctggggctcaaatgtact
cgctgggggggcggccggcgctccaagaggcacgcagccatcgccagcgggggctgcttc
atcgccgccggcttcctgtgcctggtgcccgcttcctggttcaccaaagaggtcatcact
aacttcctggaccgcagcgtgcacgagagcaataagtttgagcccgggggcgccgtgtac
gtggccttcctgtcggcaggcttcctctttgtgggggggtccatcttctgtgtgtcgtgc
tcggggaagaggcccggccaccaggagatgatcttgctgccgccccctgataaactctta
ctgcagcagcaacagcacctcctacagcaacagcagcaggaccagctccagcaccagtac
tgctccctctccccactagacaataaaacaggctacagtctgcaggactatgtgtag
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