Salmo trutta (river trout): 115162507
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Entry
115162507 CDS
T08542
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C-like isoform X1
KO
K03252
translation initiation factor 3 subunit C
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
stru03012
]
115162507
Translation factors [BR:
stru03012
]
Eukaryotic type
Initiation factors
eIF-3
115162507
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
Motif
Other DBs
NCBI-GeneID:
115162507
NCBI-ProteinID:
XP_029569727
Ensembl:
ENSSTUG00000045930
LinkDB
All DBs
Position
2:complement(71427051..71481219)
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AA seq
1020 aa
AA seq
DB search
MSRFFATGSDSESEDSSSSDEITPKVPGTSFTKQSLLLRDDEEDTKRVVRSAKDKRFEEL
TNLIKTIRNAMKIRDMSKCLEEFEQLCRAFLKSKTIVDKEGMPPFYIRLLSDLEDYLNQL
WEDKEGKKKMNKNNAKALSTLRQKIRKYNRDYETEIASYKENPMVSADEEDEKDEVESGV
SSDSDDEPGDAKSFLKKKPAAEALPPDSSKFLKGAADEESSSSSHVDDEDWDSDTAESGS
GSEDEEGNDAIAKIFLKKSGSEVERHTSEKKKEDRKKRHKRKERVEEEAEEEAQEEDEGE
WEKVKGGVPLVKMFAKGTEINTTVVVKKLNEILQARGKKGTDRAAQIELLHALANISNEN
ILGEGILVKIKFNIIASLYDYNPNLAAFMKADMWKKCLDCIDELLDILFNNNNIFIGENI
AEDSENLAITDSQPFRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVDNLKDEGHVCGII
DRLLGYLETKGSTEEVCRVYLRRIMHTYYKFDYKAHRRALGLQGETKSEQDAEESEGEDS
AFIMDRLCKFIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQHADPP
VQILYNRTMVQLGICAFRQGMIKDAHNALLDIQSSGRAKELLGQGLLMRNMQERNAEQEK
IEKRRQVPFHMHINLELLECVYLVSAMLLEIPYMAAHEFDARRRMISKQFHHQLRVGERQ
PLLGPPESMREHVVAASKSMKMGDWRTCHSFIINEKMNSKVWDLFPETQCVREMLVRKIQ
EESLRTYLFTYSSVYDSISMATLKEMFELELPMVHSIISKMIINEELMASLDQPTQTVVM
HRTEPTSLQNMALQLAEKLGGLVENNERVFDLKQGVYGGYFNRDQKGYQQKQGGYNRDQR
GSYQQKQGGYNRDGQRGGYQQKQGGYNRDVGGYQQRQGGYNRDGGGYQQRQGGYNRDGNR
GGGGYQGQNRGGYQGGGGGGGYQGSSGGGGYQGGGGYQGGGGGYRGGYKGGYQNQDRRDY
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtttctttgccaccgggtccgacagcgagtctgaggattcctcgtcgtctgat
gagatcacccctaaagtacccggcacttctttcaccaagcagtcattgctgcttcgtgac
gatgaggaagacaccaagagggtggtgcgtagtgccaaggacaagaggtttgaggagcta
actaacctgatcaagacaatccgcaacgccatgaagatccgagatatgtccaagtgtctg
gaagagtttgagcagctttgtcgagcattcctcaaaagcaagactatagtggacaaggaa
gggatgcctcccttctacatccgtcttctgtctgacctagaagactatttaaatcagctt
tgggaggacaaagaaggcaagaagaagatgaacaagaacaacgccaaagcactcagcacc
ctgcggcagaagatccgcaagtacaacagggactacgagacggagatcgccagctataag
gagaacccaatggtctctgcggatgaggaggatgagaaggatgaggttgaatcaggcgtg
tcgtcagatagtgatgacgagccgggagacgccaagagcttcctgaagaagaaaccggcc
gccgaggcactgccgccggacagcagcaagttcctgaagggagcagcggatgaggagtct
tccagcagcagtcatgtggatgacgaagactgggactcagacaccgcggaaagcggcagt
ggtagcgaagacgaagagggcaatgacgccattgccaaaatcttcctcaagaagtctggt
agtgaggtcgagcgacacaccagtgagaagaaaaaggaggataggaagaagagacacaag
cggaaggagcgcgtggaggaagaggcagaggaagaggcccaagaggaggacgaaggagaa
tgggagaaggtgaagggtggagtgcccctcgttaagatgtttgccaagggaacagaaatc
aacacaacagttgtggtaaagaaactcaacgagattctgcaggcccgtggaaagaaggga
acagacagagctgcccagatcgaacttctccatgccctggccaacatctccaatgagaac
attctgggcgagggcatcctggtcaagatcaagtttaacatcatcgcctccctgtacgac
tacaaccctaacctggccgccttcatgaaggctgatatgtggaagaagtgtctagactgc
attgacgagctgctggacatcctctttaacaacaacaacatctttatcggcgagaacatc
gccgaggacagtgagaacctggccattactgactctcagccattcagggtgcgtggctgc
attctgaccttggtggagaggatggacgaggagttcaccaagatcatgcagaacactgac
ccccactctcaagagtacgtggacaacttgaaggacgagggtcatgtgtgcggcattatc
gaccgtctgctgggctacctggagaccaagggcagcacggaggaggtgtgccgcgtctac
ctacgccgcatcatgcacacctactacaagtttgactacaaggctcaccgccgcgcactg
ggcctccagggagagaccaagtctgagcaggatgcggaggagagtgaaggcgaggacagt
gccttcatcatggaccgcctgtgcaagttcatctacgctaaggaccgcacagaccgcatc
cgcacatgtgccatcctgtgccacatctaccaccacgcacttcactcgcgctggtatcaa
gcccgtgacctgatgctcatgagccacctgcaggataatattcagcacgctgacccgcct
gtacagatcctgtacaacaggaccatggtgcagctggggatctgtgccttccgccagggc
atgatcaaggacgcccacaatgccctgctggacatccaatcgagtggccgcgccaaggag
ctgctgggccagggcctgctcatgaggaacatgcaggagaggaacgccgagcaggagaaa
atcgagaagaggcgacaggtgcccttccacatgcacatcaacctggagctgctggagtgc
gtgtacctggtgtctgccatgttgctggagatcccctacatggcggcccacgagtttgac
gcccgccgcaggatgatcagcaagcagttccaccaccagctgagggtgggcgagaggcag
ccccttctgggacccccagagagcatgcgtgagcacgtggtcgcggccagcaagtccatg
aagatgggcgactggcgcacctgccactcattcatcatcaacgagaagatgaacagcaag
gtttgggatctattccctgagacgcagtgcgtgcgagagatgcttgtcaggaagatccag
gaggagtctctgaggacttacctgttcacctacagcagcgtttacgactccatcagtatg
gcgacactgaaggagatgtttgagctggagctgcccatggtgcacagcatcatcagcaag
atgatcatcaatgaagagctcatggcatcactggaccagcccacccagacggtggtgatg
caccgcacagagcccacctccctgcagaacatggccctgcagctggcagagaagctgggt
ggcttggtggagaataatgagcgcgtctttgacctcaagcagggcgtctacggcggctac
ttcaacagagatcaaaaaggctaccagcagaagcagggtggctacaacagagaccagaga
ggcagttaccaacagaagcaaggcggttacaaccgagacggtcagagaggcggctaccaa
cagaagcaaggaggttacaacagagacgtcggcggttaccaacagaggcaaggcggttac
aaccgagacggaggcggttaccaacagaggcaaggcggttacaaccgagatggaaacaga
ggcggtggtggctaccaggggcagaacagggggggctatcagggtggtggtggtggtggc
ggctatcagggtagtagtggtggtggcggctatcagggtggtggcggttatcagggtggt
ggtggcggctacaggggaggctacaaggggggctaccagaaccaggacaggagagactac
tga
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