Salmo trutta (river trout): 115162626
Help
Entry
115162626 CDS
T08542
Name
(RefSeq) protein Smaug homolog 1-like isoform X1
KO
K27396
protein Smaug
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115162626
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115162626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
PHAT
SAM_3
Motif
Other DBs
NCBI-GeneID:
115162626
NCBI-ProteinID:
XP_029569960
Ensembl:
ENSSTUG00000033842
LinkDB
All DBs
Position
25:complement(46525946..46601152)
Genome browser
AA seq
775 aa
AA seq
DB search
MMFRDQVGVLGSWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLAECTELHVLEG
EANNPVVISQWQGEPKERVISLVLTHLPLLKPGNVEAKGEYMRLLPRILAHTIDHGRHLE
ESRQLLSYALIHPATSLDDRAALALWLNHLEERAAARGDSLERPPPAPASLHQTPPSTHS
LSGSSWSSSGSHLGQLYHHQRYGSDDRLNGWQGSRDSGLGSGWHQQQQGHGGCENGGHLA
LYPSSSVPGSINTVGTGGSILSGGGGGQHSPLKRSVSLTPPMSGSSLASSSSSSGGQALG
LGLGHGWLSQEDLRGPRGGGGGGLGLAPTDPHHAPLSPQSSVASSGSGGSEHLEDGGGLH
RSSTFHEEGSCMRVFPLDYCPGVAQRPPKQHPGPLGTNRVGQGGLPQLYNDVPAWLKSLR
LHKYAALFSTMTYDEMMSLTEQQLESQNVTKGARHKIVISIQKLKERQKMLRCLEKDVLE
GGNLRGPLAELHQMILTPIKAVASDESSPSSPSSTAHRPLLSPEGKSSAAPGGEGETGTT
LIAEGDIPGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLLHEAFTETQKKRLLSWK
QQVQKLIRSFPRKTLLDMAGYRAQRSSSSSSRGFSQSNSLPTAGCVGGSSSVSAARRSLR
QFQMPSRSLPGARPGLLGPTPHSTSSTPTGLKQGRQGLWFANPGGSNSMPSRTHSSVQRT
RSLPVHTTPHTMVMFQQSDLQVPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgaccaggtgggtgtcctgggaagctggtttaagggatggaatgagtgt
gagcagacggtggctctgctgtcgctgctgaagcgggtgtcgcggacccaggcccgcttc
ctgcagctgtgtctggagcacagcctggccgagtgcaccgagctccacgtgttggagggg
gaggccaataacccagtggtgatcagccagtggcagggtgagcccaaggagcgtgtcatc
tccctggtcctcacccacctgcccctgctcaagccgggcaacgtcgaagccaagggcgag
tacatgcgccttctcccccgcatcttggcgcacaccatcgaccatggccgccacctcgaa
gagtcacgccaactcctctcctatgccctcatccacccggccacctcgctggacgaccgc
gctgccctcgccctctggctcaaccacctggaggagcgcgccgctgcccggggcgactcg
ttggaacggccaccccccgccccggcctcactccatcagacgcccccttcgacacactcc
ttgtcagggtccagttggagttcctcagggagccacctgggtcagctataccaccaccag
cgctacggctcggatgataggctcaacggctggcaggggtccagggactcgggattgggc
agtggttggcaccaacagcagcaggggcatggagggtgtgagaatggcgggcacctggca
ctctacccgtcctcgtcggtgcctgggagtatcaacacggttggcacgggcggcagcatc
ctgtccggcggtggcggcgggcagcacagccccctgaagcgctcggtgtccctcaccccc
ccgatgagcggcagctccttggccagttcctcctcctcgtcgggcggccaagccctgggc
ctgggtctgggtcatggttggctctcccaggaggacctgcgcggtccccggggaggagga
ggaggagggctggggctggcccccaccgaccctcaccacgctcccctctcccctcagagc
agcgtagcgtcgtcaggcagcggcggcagtgagcacctggaggatggaggaggcttgcac
cgcagcagcacattccacgaggagggcagctgcatgagggtctttcccttagattattgt
ccaggcgtggcgcaaaggcccccaaagcaacatccaggccctctggggaccaacagagtt
gggcaggggggcctgccccagctttacaatgatgtgccagcctggctgaaaagcctccgt
ctccacaaatatgcggcgctcttctccaccatgacgtatgacgagatgatgtcactgacc
gaacagcagctggaatcacagaatgtcaccaaaggggcacggcacaagatagtgatcagc
attcagaaactgaaggagcgtcagaaaatgctgcgttgcctagagaaggatgtgttggag
ggcgggaacctgcgtggccctctcgccgagctccaccagatgatcctgacgcccatcaag
gcggtggccagcgatgagtcgtcccccagctcgccctcctcgaccgcacacaggccccta
ttgagcccagaggggaagagcagtgccgccccgggaggggaaggggagacagggaccacc
ctcatcgctgagggggacatccccggccagttcacccgcgtcatgggcaaagtttgcaca
cagctcctggtgtccaggccggacgaagagaacatcagctcctacctgcagctcattgac
aagtgccttcttcacgaggcattcacggagacgcagaagaagcgactgttgtcgtggaaa
caacaggtgcagaagctgatccgttcgttccctaggaagaccctcttggacatggccggc
taccgggcgcagaggagcagcagcagcagtagccggggcttcagccagtccaattctctc
cccacggcgggctgcgtggggggcagcagcagcgtgtcggcggcccgtcgcagcctgcgc
cagttccagatgccctcacggagcctgcccggcgccaggccgggcctgctgggacccacg
ccacatagcaccagcagcacccccactggcctcaagcagggacgacagggtctttggttc
gccaaccccgggggcagtaacagcatgcccagcagaacccacagctcagtgcagaggacc
cgctccctgcctgtccacaccacgccacacaccatggtcatgttccagcagtctgatctc
caggtgccggtgactgaaccagacatcaacaaccggctggagtctctgtgtctgagtatg
acggagcacgctctgggagatggagtcgaccgcacatccaccatctga
DBGET
integrated database retrieval system
