Salmo trutta (river trout): 115162712
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Entry
115162712 CDS
T08542
Name
(RefSeq) TATA-box-binding protein 2-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115162712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115162712
03021 Transcription machinery [BR:
stru03021
]
115162712
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
115162712
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115162712
RNA polymerase III system
TFIIIB
115162712
RNA polymerase I system
SL1/TIF-1B
115162712
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
115162712
NCBI-ProteinID:
XP_029570039
LinkDB
All DBs
Position
25:15722626..15725266
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AA seq
306 aa
AA seq
DB search
MDEDSALESYFDDPIGNVPDASGFLFEGDLGLQGAPQLQDPSFLSSSSQPEKDIGEDLDL
SFLPDDLPEDTCGNAATNANMTQDRVFDGYRPEESAETDPNQPAVTGASTFCPMTPMTPM
TPVAESSGIIPMLQNIVSTVNLACPLDLKSIALQARNAEYNPKRFAAVIMRIREPRTTAL
IFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFPIRLEG
LVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERGEIYEAFENIYPIL
KGFRKQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagattcagcattggagagttattttgatgacccaattggaaatgtaccagat
gcctctggcttcctgtttgaaggggacctgggcttgcagggcgcccctcagctccaggat
ccatcctttctctcctcctcaagccaaccggagaaggacatcggggaggatctggatctc
agcttcctgcctgatgacctgccagaggacacctgtggaaatgctgctactaatgctaac
atgacacaagaccgcgtgttcgatggctacaggcctgaggagtctgctgagactgaccct
aaccagccggccgtgacgggagcctctaccttctgtcccatgacgcctatgacccccatg
actccagtggctgagagttctggaataatccccatgttacagaatattgtatctacagtg
aatctggcttgcccactggacctaaagtccattgctcttcaagccagaaatgctgagtac
aaccccaagcgttttgctgctgtcattatgagaatacgggaacctaggaccacagcactc
atcttcagctccggaaagatggtctgcacaggagccaagagtgaggagcagtctcgactg
gctgcccgcaagtatgctcgtgtagtgcagaaattgggctttcccgccaaattcctggac
ttcaagatccagaacatggtggggagttgtgatgtctgcttccccattcggctggagggt
ctggtgctgactcatcagcagttcagcagttatgagccagagctgtttccgggtttgatc
taccgtatggtgaaaccacgtattgtcttactgatctttgtgtctggaaaagtggttctg
acaggggctaaggaacgtggagagatctatgaagcctttgagaacatctaccccattctg
aaaggattcagaaagcaataa
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