Salmo trutta (river trout): 115162958
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Entry
115162958 CDS
T08542
Name
(RefSeq) protein jagged-1b-like isoform X1
KO
K06052
jagged-1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04330
Notch signaling pathway
stru04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115162958
04371 Apelin signaling pathway
115162958
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
stru04090
]
115162958
CD molecules [BR:
stru04090
]
Proteins
115162958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MNNL
EGF_TEN
EGF
hEGF
DSL
EGF_DL_JAG
JAG1-like_EGF2
EGF_2
EGF_CA
EGF_Teneurin
EGF_3
FXa_inhibition
Motif
Other DBs
NCBI-GeneID:
115162958
NCBI-ProteinID:
XP_029570366
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All DBs
Position
26:5773247..5814250
Genome browser
AA seq
752 aa
AA seq
DB search
MERERAHGRTPADCCSGGARISTRTEMRKERGRGQQWTVIFIVALSLQPQAVCAVGMFEL
QIRHFQNPHGVLQSGECCDLQATGGQRCSLTDQCDTFFRACLKEYQARVVPTGACTFGAG
STTVLGGNSQSLRHRGHDEGRREDGTTGHVIIPFKYAWPKSFSLVLEVLDHDNETSESGQ
AGLIERVLLSSMLNPGEQWQTYRHHGRTLSLEYRLRYRCDSNYYGPFCNKFCRPRDDFFG
HFGCDLSGVKVCKEGWTGPECQEAVCRQGCHQIHGSCTVPGECKCHYGYQGALCDQCVTF
PGCVYGSCIEPWQCVCDVNWGGLLCNKDLNYCGTHQPCKNGGTCSNTEPNEYQCECREGF
RGRDCDIVEHACLSSPCVNGATCAEDPSGFSCVCADNWTGHTCADVVRQCDSNPCGRGAT
CQESPERFRCLCPPGWTGRTCRLDTNECDTGVCVHARSCRNLIGGYLCDCLPGWAGPNCD
IRNSSCQGLCLNGGHCEDSVSGSRCLCVPGFSGKHCQTGPSPCDSTPCQHGGQCVDKEGR
AELCSCPIGYSGTYCEVVVDLCNPNPCQQGVPCRSTEGGYMCACPEGYYGNECTSLKDPC
HGQHCPGAMSDPARGGVNLYMVLVGVSALVMACGCAACALFLSRLHRRRKKTQGGPQEEG
INNQREFVTLVRNLDHPAPLLPPLNPNTTAHTPVPVPRCCEEIELTLPPSPAPSQPSPAL
KPSTPAAKQDISNLEREKLNRFHYSDNQELEV
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggagagagaaagagcgcacggacgaacgccggctgattgctgcagtggaggcgcgagg
atcagcaccaggacagagatgaggaaagaacggggtcggggacagcagtggaccgtgatt
tttatcgtcgccctttctctgcaaccgcaggctgtgtgtgcagtggggatgtttgagctg
cagatccgtcacttccagaacccccatggtgtgctgcagagtggcgagtgctgtgacctc
caggccaccggggggcagcgctgctctctcacggaccagtgtgacaccttcttcagggcc
tgcctcaaggagtaccaggcccgggtcgtccccaccggagcctgcaccttcggggcgggc
agcaccaccgtcctggggggcaacagccaatccctccgtcatcgagggcacgacgaagga
cgaagagaggacggcactacaggacacgtcatcattcccttcaaatacgcctggccgaaa
tctttctccttggttttagaggttctggaccatgacaacgaaacatcagaatcaggtcag
gctggtctgatcgagcgtgtcctcctgtcctccatgttgaatcccggcgagcagtggcag
acgtaccgtcaccacggacgcacgctcagcctggagtaccgcctgcggtaccgctgtgac
tccaactactacggccccttctgcaacaagttctgccgaccccgggacgacttcttcgga
cactttggctgtgacctcagcggcgtcaaggtctgcaaggagggctggaccggaccggag
tgtcaagaagcggtgtgcagacagggctgtcaccagatccatgggtcctgcactgtgcct
ggagaatgcaagtgtcactatggctatcagggtgctctgtgtgaccagtgtgtgacgttc
cccggctgcgtctatggcagctgcattgaaccctggcagtgtgtgtgtgacgtcaactgg
ggaggcctgctgtgtaacaaagatctcaactactgcggtacccaccagccctgtaagaat
gggggcacctgttccaacacagagcccaacgagtaccagtgtgagtgccgagagggcttc
cgcgggcgcgactgtgatatcgtggagcatgcgtgtctctcctccccctgtgtgaacggg
gccacctgcgcggaggacccgtcaggtttcagctgtgtctgtgcggacaactggaccgga
cacacctgcgcagacgtggtgcggcagtgtgactcaaacccgtgtgggcgcggggcgacc
tgccaggagtctccagagaggttccggtgcctctgcccacccggctggactggcagaacc
tgccgactggacaccaacgagtgtgacacgggtgtgtgtgtccatgctcgctcctgccgt
aatctgattggtggatacctgtgtgattgcctgccaggctgggcggggccaaactgtgac
atcaggaacagcagttgccaggggttgtgtctaaacggaggtcactgtgaggactctgtg
tcaggctcacgctgcctgtgtgtgcctggtttctctgggaagcactgccagactggcccc
agtccctgtgatagcaccccctgtcagcacggaggccagtgtgtggacaaggagggcagg
gcggagctgtgtagctgtcccatcggctactcagggacctactgcgaggtggtggtggat
ctgtgcaatcctaacccatgccagcagggggtgccctgtcggagcaccgagggggggtac
atgtgtgcctgccccgagggttactatggtaatgagtgcacaagccttaaggacccctgt
catggccaacactgtccaggtgccatgtcagacccagctcgtggaggggtcaatctctac
atggtgttggtgggtgtgtcagcgttagtaatggcgtgcggctgcgctgcttgcgccctc
ttcctctcccgtctccaccgacgacggaaaaagacgcagggcgggccccaggaggagggc
atcaacaaccagagggagttcgtcacccttgtacgaaacctggaccaccccgcgcccctc
ctgccccctctcaaccccaacaccaccgcccacacccctgtccctgtaccgcgctgctgc
gaggagatcgagctcactctgcccccctccccggccccctcacaaccctcccctgcactc
aaaccctcaacccccgccgccaaacaggacatctccaacctggagagggagaagctcaac
cgcttccactactcagacaatcaggaactggaggtgtga
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