Salmo trutta (river trout): 115163007
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Entry
115163007 CDS
T08542
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115163007
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
Other
115163007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Ig_6
Interfer-bind
fn3_2
DUF1461
Motif
Other DBs
NCBI-GeneID:
115163007
NCBI-ProteinID:
XP_029570428
Ensembl:
ENSSTUG00000011503
LinkDB
All DBs
Position
26:complement(7341003..7478326)
Genome browser
AA seq
2077 aa
AA seq
DB search
MWLVTLFLLYSLQEVNSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGGAPHAVLRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSYIHDNDYFCTAENQAGKIRSPSIRIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIVPGNRFFLTSFG
ALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPSVLDSFQSGEVQVG
RNVELPCIASGYPNPTIRWLKDGRPLPADSRWTRRLTGLTVSDLRLGDSGNYICEVTNSF
GSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFTLSWYRNTEPVLPDQH
FSIQGAHNETLFISAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIVSSFSERVVV
PGEPFSLMCAAKGAPPPTITWTLDDEAVARDPSRVRASQYTLSDGSTVSHVNVSSPEIRD
GGVYRCAARNSAGSAEYQARINVRGSPRIRDMRNITAVAGRNTFINCRVIGYPYYSIKWY
KEGLLLPDNHRQVVYENGTLKLSDVQKVLDEGAYLCSVLIQPQIFISQTVYVQVKVPPLI
QPFDFPPTSIGKLMYIACVVSSGDMPIHITWRKDGQEIVPSSGVNIETKEYMSSLQIGKV
SLKHNGNYTCIASNDAATVSSERQLTVTVPPQFVVQPNNQDGIYGKVGVLNCSVDGYPPP
KVMWKHAKGTGNPQQYHPVPLTGRIQIMGNGSLLIRHVLEDDRGYYLCQASNGVGSDISK
SMVLTVKIPAMITSHPNTTMAIKGQIKELNCTARGEWPIIIRWERGDTVIDPDRNPRYAI
TTSPNEKSDEVLSTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVRE
VKDRSMNLRWTQRFDGNSIITSYDIEYKNKTDPWELKHATRKISPTNNQANIVDLHPAQV
YSIRMFSYNKIGHSQASKELTISTEEAQPDGPPMEVFLQPMTSQSIRVTWKAPRKELQNG
VIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPS
SSEINATTLEDVPSQPPQTVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWSLFPDG
EWGEMQNITTSREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTREDHPGPPAGI
KAVPSSTSSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPAPSEYEANPELLFYRVTHLNR
GQQYLIWAAAVTTAGRGNISDKVTVEPAGKAPAKILSFGGTVTTPWMKEVRLPCSSVGEP
TPTIKWTKDSEDTAIPVTLDGQRLIMANGTLILRSVKAEDSGYYTCTATNTLGFDTIIVN
LLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNMEGWRDVFISSSE
RSFKLDDLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKEQPVFTHVNSTHAR
LNLQGWASGGCPITAVLLEFRPKGNWAWQNVRTNATADVFLAELREATWYELKMKACNSA
GCGNQSSQFATLDYDGTGTIPPIKSARPEGDDVKKLFSIGCPIILVTLVVALLFIIRKKR
KEKRLKRLRDAKSLAEMLISSKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQI
GEDKATIPVTDTEFSQNVNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKSVK
SAHSTRNRYSSQWTLTKCQSSTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGR
NSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNDNADSM
TSMSTPSETGLCRFTASPPKPQDYDRGRPTNVAVPIPHRANKSEWTGKSDYCNLPLYMKT
DPFFRKQSEQHDPCPVVPPREASIRSLAQRAYHTQGRHMTLDSSKQQQALTVGHAGLTGL
SGSGGASGGVSGVGGATGGPSGGSSTTSLSQRTLTMPGSSSSSAQSAAAAATASASGGAT
GGDSRDSLLESSSSGLGRLERQKQAAGGAYSKSYTLV
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaactttattcctgctgtattctttacaagaagtgaacagtgaggatgtg
gtctcgacgcggctgtactttgtaaacgcctccctgcagcgggtgaccttctccagctcg
gttggggtgtccctgccctgccccgcgggcggcgcaccccatgccgtcctgcgctggtac
ctggccaccggcgacgacatctacgacgtgccccacatccgccacgtgcacgccaacggc
acactccagctctaccctttctcgccctccgccttcaacagctacatccatgacaacgac
tacttctgcaccgcagagaaccaggccggcaagatccgcagccccagcatccgcatcaaa
gcagtgttcagggagccctatacggttcgggtggcagaccagcggtccatgcggggcaac
gtggccgtgttcaagtgcctcatcccctcggccgtgcaggagtacgtcagcgtggtgtcc
tgggagaaagacaccgtctccatcgtgccagggaaccgtttcttcctgacgtcgtttggg
gccctatacatatcagaggtccagaaggaagatgccctgtccacctaccgctgcatcacc
aagcacaaatacagtggcgagactcgccagagcaacggagccaggctgtctgttatggac
cctacggagtccaccccctcagtgttggacagtttccagtccggggaggtccaggtgggg
cgtaatgtggagctgccctgcatcgcctcggggtatcccaaccccaccatccgctggctg
aaggacgggcgcccgttgcccgccgactcccgctggacgcgccgtctcacgggcctgacg
gtcagcgacctgcgtctgggcgacagcggcaactacatctgtgaggtcaccaacagcttc
ggctctaaagaggtgaccggtcatctcaacgtcatcgagccgttgagagtgactctatct
cctaagaacctgaagacgggcatcagcagcacggtgatcctgtcgtgtgccgtgcagggt
tctccccacttcaccctgtcctggtaccgcaacacagaacccgtcctccccgaccagcac
ttctccatccagggggcccacaacgagaccctgttcatctccgctgcccagaagagacat
tcgggagcctaccagtgcttcgccacccgcaagggccagaccgcacaggacttctccatc
atactgctggaggatggtacgccccgtatcgtttcctccttcagtgagcgagtggtggtc
ccaggggaacccttctccctcatgtgcgctgccaaaggtgcccctccccccaccatcacc
tggactctggatgatgaggctgtggccagggacccgtcccgggtgagggccagccagtac
acgctgtcggacggctccaccgtgtcccacgtcaacgtcagcagcccggagatccgcgac
ggaggggtgtatcgctgcgccgcacgcaactcggccggtagcgccgagtaccaagcgcgc
ataaacgtaagaggttctcccaggatcagggatatgcgtaacatcacggcggtggctggg
aggaacacctttataaactgccgtgtgattggctatccctactactcaatcaagtggtac
aaggaggggcttctgctgcccgacaaccatcgtcaggtggtgtatgagaatggtactctg
aagctaagtgatgtccagaaggtcttggacgagggggcgtacctatgcagtgtgctcatc
caaccacagatcttcatcagtcagaccgtctacgtccaagtcaaagtgccccctctgatc
cagccctttgacttcccccccacctccattgggaagctgatgtacatcgcctgcgtggtg
tcgtctggcgacatgcccatccacatcacctggcgtaaggatggccaggagatcgtgccc
tcgtccggcgtcaacatcgagaccaaggagtacatgagctcgctgcagatcggcaaggtg
tcgctcaagcacaacggcaactacacctgcatcgctagcaacgacgccgccaccgtcagc
tctgagaggcagctcactgtcacagtgccccctcagtttgtggtccagcccaataaccag
gatgggatctacggcaaggtgggggtcctcaactgctccgtggacggatacccccctccc
aaagtcatgtggaagcacgccaaaggtacagggaacccgcagcagtaccacccagtgcct
ctgaccggtcggatccagatcatggggaacggctccctgctgatccgtcacgtcctggag
gacgaccggggatactacctctgccaggcctccaatggcgtgggctccgacatcagcaag
agcatggtcctgaccgtcaagatcccagcaatgatcacgtcgcaccccaacaccaccatg
gccattaagggacagattaaggagctgaactgcacagcgaggggggaatggcctatcatc
atccgttgggagcgtggtgacacggtcatcgaccccgaccgtaaccctcgctacgccatc
accaccagccccaacgagaagagtgatgaagtattgtctacgctgaagctgaagccagca
gaacgtggtgactcggtcttcttctcctgccatgccatcaactcatatggagagggccgg
ggactcatccagctcactgtgcaagagcccccagaccctccagagttggaggtgagggag
gtgaaggatcggagtatgaacctgcgctggacccagagatttgacggcaacagcatcatc
accagctacgacattgagtacaagaacaagaccgatccatgggagttaaagcatgccacc
cgtaagatctctcctaccaataaccaggccaacatcgtggatctacaccctgcccaagtc
tacagcatccgcatgttctcctacaacaagatcggacacagtcaagccagcaaggagctc
accatcagcacagaggaagcacagcctgatggtcctcctatggaggttttcctccagcct
atgacctcgcagagcatccgcgtcacctggaaggcccccaggaaggagcttcagaacggg
gtgatccggggttaccagattggttaccgtgagaacgggcctggcagtaacggccagtac
agtatcgtggagatgaaggctacgggggacagtgaggtgtacaccctggacaacctgaag
aagtttgcccaatatggagtggtggtccaggccttcaacagggccggcacaggcccctcc
agctctgagatcaacgctaccacactggaagatgtgcccagccagccgccccagaccgtg
cgggccatctcggtgacatccgacgaggcggtaatcacctgggcggagcccccgcgtctg
acactgcacggcgtgctgaagggttaccgtgtggtcttctggtccctcttccccgacgga
gagtggggagagatgcagaacatcacgacatctcgtgagcaggtggagctgagagggctg
gagaagttcactaactacagtgtgcaggtgctggcctacacacaggctggggacggggtc
aggagcaatgtgctgtacatccagacccgcgaggaccaccctggccccccggctggcatc
aaagctgtgccctcatccaccagcagtgtggtggtttcctggctacccccgcacaagccc
aatggaatcatccgcaagtacaccatctactgctccagccccggatcaggccaaccggcc
cccagtgagtacgaggccaaccccgagctgctgttctaccgggtcacccacctgaaccgg
ggacagcagtacctcatctgggccgccgccgtcaccaccgccggacgggggaacatcagc
gacaaggtcactgtggagcctgctgggaaggccccagctaagatcctatcgttcggaggt
acagtgaccactccctggatgaaggaggtgaggctaccctgcagctcagtgggcgaaccc
acccccactatcaaatggaccaaagacagtgaggacacggccatcccggtgactctggac
ggtcagaggctcatcatggccaatggcacactgatcctgcgctctgtgaaagctgaggat
tctgggtattacacgtgcacagccaccaacacgctgggctttgacaccatcattgtcaac
ctgctggtgcaagttcctccagaccagccccgtctgactgtctccaccacctccacctcc
tctatcaccctggcctggatccctggggacaacggaggatcctccatcagaggttttgtg
ctgcagtactcggtggacaacatggagggttggagggatgtgttcatcagttccagtgag
aggtccttcaagctggacgacctacgctgtggcacctggtacaaggtcaaactggccgcc
aagaacagcgtgggagcgggacgcatcagtgaaatcatcgaggctaagacccacggacga
gagccccagttcaataaggaacagccagtgttcacccacgtcaactctacccacgcccgg
ctcaacctgcagggctgggcgagcggtggctgccccatcacggccgtgctgctggagttc
agacctaagggcaactgggcgtggcagaacgtgcgcaccaacgccacggccgatgtgttc
ctggctgagctccgcgaggccacctggtacgagctgaagatgaaggcttgtaacagcgcc
ggctgcgggaaccagagctctcagttcgccacgctggactacgacggcacaggtaccatc
cctcccatcaagtcagcgcggccggagggcgacgacgttaagaagctcttctccatcggc
tgccccatcatcctagtcactctggtcgtcgccctgctcttcatcatccgcaagaaacgc
aaagagaagagactgaagcgactgagagatgccaaaagcctggctgagatgctgatcagc
agtaagaataaccggagctttgacacccctgtgaaggggcccccccagggcccccgactc
cacatcgatatccccagagtccagctgctcatcgaggacaaggagggcatcaaacagatc
ggtgaagacaaagccaccatcccagtgacggacacagagttcagccagaatgtgaatcca
cagagcttctgtacgggcgtgtctgtgcatcaccccgccctcatccagaacaccggccct
ctgattgacatgtctgatatcagaccagggaccaacccggtgtcgaggaagagcgtgaag
tcggcccacagtacgaggaaccgctactccagccagtggaccctgaccaagtgccagtcg
tccacgcccgcccgtaccctcacctccgactggcgcaccgtgggctcccagcatggcatc
accgtcaccgagagcgacagctacagcgccagcctttcacaggacacggataaggggcgt
aacagcatggtgtctacagagagtgcgtcgtccacctatgaggagctggcgcgggcctac
gaacacgccaagcttgaggagcacctgcagcacgccaagtttgagatcaccgagtgcttc
atctcagacagttcctcagaccagatgaccacgggcaccaacgacaacgccgacagcatg
acctccatgagcacgccgtccgagacgggcctgtgtcgcttcaccgcctcgccacccaaa
ccccaggactacgaccgcggcagacctaccaacgtagccgtgcccatcccccaccgcgcc
aacaagagcgagtggactggcaaaagtgactactgtaaccttcccctctacatgaagaca
gaccctttcttccggaagcagtcggagcagcatgacccgtgcccggtggtgccgccccgc
gaggcctccatccgcagcctggcccagcgggcgtaccacacccagggccgccacatgact
ctggactcctccaagcagcagcaggctctgactgtgggccacgctggcctgaccggcctc
agcggctcagggggagcatcagggggtgttagtggtgtaggaggggcgactggagggcct
tctgggggttccagcaccacctccctgtctcagaggactctcaccatgcccggttcctcc
tcttcctctgcccagagcgccgctgctgccgctaccgcctcggccagcgggggagccacg
gggggagactccagagactctctgctggagagcagctcgtcaggcctgggcagactagag
agacagaagcaggcggctggcggggcctactccaaatcttatacactggtgtag
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