Salmo trutta (river trout): 115163176
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Entry
115163176 CDS
T08542
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1G-like
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115163176
04020 Calcium signaling pathway
115163176
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115163176
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115163176
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Hexokinase_2
DUF4834
Motif
Other DBs
NCBI-GeneID:
115163176
NCBI-ProteinID:
XP_029570707
LinkDB
All DBs
Position
2:complement(49266602..49480896)
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AA seq
1693 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDHDCESERCKILEDFDDFIFAFFAVEMVIKMVALGIFGKKCY
LGDTWNRLDFFIVLAGMLEYSLNLQNVSFSAVRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSIKLETYYHTEKDDES
PFICSMPRENGMRLCSSVPTLYEEGGLQCQVNMKSYNSTDNTTCINWYQYYSNCSAGHVN
PFKGAINFDNICYAWIAIFQVITLEGWVDIMYFVMDSHSFYNFIYFILLIIIGSFFMINL
CLVVIATQFSETKQRESQLMREQRIRFLSNASTLASFSEPGSCYDELLKLLVHVIRKGFR
QVAHVCRAVMRRAGMNIAASPPALERERERGSQRKRRKTSRQGSVVSTKGSMSVHYLVHQ
HHHHHYHYHLVNGSVRGRLVGRGVAGVGGGGGEVEMGSHSNNGGTGRLMLGPLPLLTSDL
NLANPVSPANPALGTGSGNSSSVRSTLHTDCHLEPSTPTLLAPTTSPFSLAPTPMSRPMK
RNSVPFAGPRPKNYPTLQPSTLMEFRSGSVTASTISNINLNIPSLPLERGPSSVLDTHTP
TAQLSRHDLSAIGTLDPSFTFDPESCPYCVKALSGESEGTDGNETPGESDSEGVYEFTQD
LHHRDHRDRRDSRQPRKRQRKLGTTVGRVVRAWRLVCDTFRKIVDSKYFGRGIMIAILIN
TLSMGIEYHEQPDELTNALEISNIVFTSLFALEMLLKVLVYGPFGYIKNPYNIFDGVIVV
ISVWEIVGQQGGGLSVLRTFRLMRVLKLVRFMPALQRQLVVLMKTMDNVATFCMLLMLFI
FIFSILGMHLFGCKFGSERDGDTLPDRKNFDTLLWAIVTVFQILTQEDWNKVLYNGMAST
TPVAALYFIALMTFGNYVLFNLLVAILVEGFQTEGEDSKSVSEADLSSRSMEDVNGSGKD
VSGSPVPINGHVDLKTSLTPPLITHTAATPMPVPKLPAVVDPALGYESQRGSNVSMDLDC
YNKSPISAHSTSPYAPWSSTSGWTSRRSSWNSVGRAPSLKRTKRQSGERRSLLSGEGGSS
SEDDEGGGGGTSEGDDVSLCRTDSMSQSQHRHRRMESVETRGSIDLAPDILLQVPFLYRS
ASIHSSRPPSLGGLRAPEHSDCNGKGTPAPRGALAQTQLSLEDNTEDEAAEEEVVGRFAR
LSRWLERKQPEWCRKRDTWSLYILPPDSRFRMACNKIITHKMFDHIVLVIIFLNCITIAM
ERPRIEAYSVERIFLTLSNYIFTAIFVAEMTVKVAALGWLFGDKAYLRSSWNLLDGLLVM
ISAIDILVSLVSNSSPKILGMLRVLRLLRTLRPLRVISRAPGLKLVVETLMSSLKPIGNI
VVICCAFFIIFGILGVQLFKGKFFACQGEDVRNVTNKSDCMMANYKWVRQQYNFDNLAQA
LMSLFVLASKDGWVDIMYDGLDAVGVDQQPQLNHNPWMLLYFISFLLIVSFFVLNMFVGV
VVENFHKCRRSQEAEEAKRREEKRLKRMEKKRRKAQSKPYYSDYSPTRLLIHNMCTSQYL
DLFITVVIGLNVITMAMEHYQQPKELDEALRICNYIFTLVFVLESVFKLVAFGFRRFFKD
RWNQLDLAIVLLSIMGITLEEIEVNASLPINPTIIRIMRVLRIARVLKLLKMAVGMRALL
DTVMQALPQASSA
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgatcctgttgaactgtgtcaccctggggatgttccaaccctgtgaggaccac
gactgtgagtcagaacgatgcaagatcctggaggattttgatgactttatctttgcgttc
tttgcggtggagatggtcatcaagatggtggcgctgggcatcttcggcaagaagtgttat
ctaggagacacctggaacagactcgacttcttcatcgtgctggccgggatgctggagtac
tctctgaacctgcagaacgtcagtttctcggcagtgagaacggttcgagttctgagaccc
cttcgagccatcaacagagtgcctagtatgcgtatcctggtgaccctgctcctagacacc
ctgcccatgctggggaacgtcctgctgctctgtttcttcgtcttcttcatcttcggcatc
gtgggtgttcagctgtgggcggggctactgaggaaccgctgcttcctgcccgagaacttc
tcactccctctgtccatcaaactagagacctactaccacacagagaaggacgatgagagt
cccttcatctgctccatgcccagggagaacggcatgcgtctgtgttcctctgtgcccacc
ctgtatgaggagggaggtctccagtgccaggtgaacatgaagtcctacaacagcacagac
aacaccacctgtatcaactggtaccagtactacagtaactgctccgcgggacacgtgaac
cccttcaaaggggccatcaactttgataacatctgctacgcctggatcgccatctttcag
gtgatcactctggagggatgggtggacatcatgtactttgtgatggattctcactccttc
tacaacttcatctacttcatcctcctcatcatcattggctctttcttcatgatcaacctg
tgtctggttgtcatcgccacccagttcagtgagaccaagcagagggagagccagctgatg
agggaacagcgcatccgtttcctgtccaatgctagtaccctggcctccttctctgagccg
ggctcctgctacgacgagctgctcaaactcctggtccacgtcatccgcaaggggttcagg
caggtggcccatgtctgccgggccgtgatgcgccgtgctgggatgaacatcgcagcctct
cctcctgccctggagagagagagggaacgggggagccagagaaagaggaggaagacttcg
cgacagggttctgtggtctccacaaaagggtctatgtccgttcattacttggttcaccaa
catcaccatcatcattatcactatcacttagtgaacgggagtgtgagagggagactagtg
gggagaggggtggcgggggtcgggggaggagggggggaagtggagatgggttcccatagc
aacaacgggggcactgggcgtctcatgctgggtcctcttccgttgctgacctctgacctg
aacttggcaaacccggtgtcaccggccaatcccgctctgggaaccggcagtggcaactcg
tcatcagtgcggagtacattacacacagactgccacctggagcccagcacccccacactc
ctcgcccctaccactagccccttctccctggcccctacgcccatgtccaggcctatgaag
aggaactcagtgcccttcgctggtcccagacctaaaaactaccccaccctacagcccagc
acactaatggagtttagaagtggcagtgttacagctagtaccattagtaatataaacctc
aatataccctctctacccctggagagaggaccatcgagtgtgttagacacacacacaccc
acagcccagctctcacgacatgacctgagtgccatcggaaccctggacccctcgttcacc
tttgaccctgagtcgtgcccctactgtgtcaaggctctgtcaggggagtcagaaggcaca
gacggaaacgagacccccggggaatcagacagcgagggcgtctacgagttcacccaggac
ctccaccacagggaccacagggaccgtcgggacagccgtcagcccaggaagaggcagcga
aagctgggtaccacggtggggagagtggtccgagcctggaggctggtgtgtgataccttt
aggaagatagtggacagcaagtattttggaagaggaatcatgatcgccattctgattaat
acactgagtatggggattgagtaccacgaacagcctgatgagctgaccaatgctttggag
atcagtaacatagttttcaccagtctgtttgccttggagatgttactcaaggtgttggtg
tatgggccgtttggttacatcaaaaacccttacaacatcttcgacggagtcatagtggtc
atcagtgtatgggagatcgtgggccagcagggcggtggtttgtctgtgttgcgtaccttc
agactgatgcgcgtgttgaagctggtgcgcttcatgcctgctctgcagagacagctggtg
gtgctgatgaagaccatggacaacgtggccaccttctgtatgctacttatgctcttcatc
ttcatcttcagtatattgggcatgcatctgtttggctgtaagtttggatcagagagagat
ggagacactctaccagacaggaagaactttgacactctgctctgggccatcgtcaccgtg
tttcagatcctaactcaggaggactggaacaaggttctctataatggtatggcctccacc
actcctgtggccgctctctacttcatcgccctcatgacctttgggaactacgtcctcttc
aaccttctggtggccatcttggtcgagggcttccagactgagggagaagactccaagtca
gtgtcggaggctgatttatcatcgaggagtatggaggacgtgaacggcagtggaaaggat
gtgtctggctccccagtccctataaacggtcatgttgacctgaagaccagtctgacccct
cctctgatcacccacactgctgccacccccatgccggttcccaagctgcccgccgtggtt
gaccctgctctgggctatgagtcccaacgcggcagcaacgtctccatggacctagactgc
tacaacaagtctccgatcagtgcccatagcacctccccttacgccccgtggagctccacc
tctggctggaccagccgtagatcaagctggaacagcgtaggccgtgccccttcgctcaaa
cgaacaaagcgtcagtctggcgaacggcggtcgctcctctccggagagggtgggtccagt
tcagaggatgatgaggggggaggaggggggacatcggagggggatgatgtgtccctgtgt
cgtaccgactccatgtcccagtcccaacaccgacacaggaggatggagtctgtggagact
agggggtccatagacctggcccctgacatactgctacaggtgcccttcctgtatcgctca
gccagtatacacagctccagacccccctcgctaggaggcctgagagccccagaacacagt
gactgtaacgggaaaggcactccggcccctagaggggccctggcccagacacagctctcc
ctcgaggacaacacagaggacgaagcagcagaggaggaggttgtgggtcgtttcgccagg
ctgtcacgctggctggagaggaaacagcctgagtggtgtcgaaagagagatacctggtcc
ctgtacatattacccccagactccaggtttcgaatggcatgcaacaagataataacccac
aagatgtttgaccacatcgttctggtcatcatcttcctcaactgcatcaccatcgccatg
gagaggcctagaatagaggcatatagcgtggagcgcatcttcctcacattatccaactac
atattcacagcgatctttgtggcagagatgactgtaaaggtggctgcgctgggctggttg
tttggtgataaggcctacctgaggagtagctggaaccttctagacgggttgttggtgatg
atctcagctatagacatccttgtctcattggtgtccaacagcagccccaagatactgggt
atgctccgggtgctgcgcctgctacggacactcaggccactacgtgtgatcagcagggcc
ccaggtctgaagctggtagtggagactctgatgtcatctctgaagcccatagggaacatt
gtggtaatctgctgcgccttcttcatcatctttggtatcctgggagtacagctcttcaag
gggaagttctttgcgtgtcagggagaggacgtgagaaacgtcactaacaagtcagactgc
atgatggccaactacaagtgggtcagacagcagtacaactttgacaacctggcacaggct
ctgatgtctctgttcgtgctggcctctaaggatggttgggttgacatcatgtatgatgga
ttagatgcagtgggagtcgaccaacagccgcagctgaaccacaacccctggatgctcctc
tacttcatctccttcctgctcatcgtcagcttcttcgtgctcaacatgttcgtgggtgtg
gtggtggagaacttccacaagtgtcgtcgcagccaggaggctgaggaggccaagcgcagg
gaggagaagagactgaaacggatggagaaaaagagacggaaagctcagagtaagccttac
tactcggattactcccccacacgtctcctcatccacaacatgtgtacctcccagtatctg
gatctcttcattaccgttgtcattggactcaacgtcatcaccatggcgatggaacactac
cagcagcccaaggagttggatgaggcgctgaggatctgtaactacatcttcaccctcgtc
ttcgtcctggagtctgtcttcaagctggtggccttcggcttccgacgcttcttcaaggac
aggtggaaccagctggatctggccatagtgttgctgtccatcatgggcatcactctggag
gagattgaggtcaacgcatccctgcccatcaaccctactatcatcaggatcatgagagta
ctgaggatagcaagagtgctgaagctactgaagatggcagtggggatgagagcgttgctg
gacacggtcatgcaggccctgcctcaggcctcgtctgcataa
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integrated database retrieval system
