Salmo trutta (river trout): 115163199
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Entry
115163199 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115163199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115163199
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115163199
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
HECT type E3
115163199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
Motif
Other DBs
NCBI-GeneID:
115163199
NCBI-ProteinID:
XP_029570742
Ensembl:
ENSSTUG00000024712
LinkDB
All DBs
Position
26:14437254..14484873
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AA seq
2085 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTVAGRLQSEQVKHKANSPPESRRPKSKASKAA
PSSASGQSRGHSSRSSLSLSVASFVLQDDPEAAGTSEREPTGHQSKTEGTTRGLKRNSAP
DLNTYTSTPAKKSKSNPPPRDHTTEAKKGPAKSSKKRPLAPEPPTGCGQSKKSGAAGASP
TLKRKKADSLPCLSSTAGSLPNRTDGRSAKPTKLASKSAASAKAGCSTVTDSSSSASTSS
SSSTGTNSAIAAQGARLKQGKDQNKARRSRSASSPSPRRSTRDKEQAKTSVSSKFEWAAR
FSPKVNLPKPKLSLPSSSKTETASKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRST
RQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADSDNNQDGTNSSAARTDEAPQGASGTA
SSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGAS
SKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNF
DIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSK
AILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVSDSLPLLTQRLTHQD
KKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMF
SLMCSNCPCLAVQLMKQNIAETLRFLLCGAANGSCQEQIDLVPRSPQELYELTSLICELM
PCLPREGIFAVDLMLKKGSAQATEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEIS
LSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPTTGGHQEVRREDARAQLMKEDP
ELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIFFADAELLKDVLRNHAVSSVCL
FPSPSHIASMLSSQDLKIVVGSLQMAEILMQKLPDVFSVFFRREGVMHQVKNLAESEAFL
TSPPKACTSGTASLCTISTANTTAATTATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRK
RLPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGKLGTQTNSTNSE
PSRTAGVSGLARALPKDSVSNNRDKIKAWIKEQACKFVARYFNTENIDGSNPALNVLQRL
CTATQQLSLQMDGGVECLVEICSIVSESDVSSFEIQHSGLVKQLLLYLTSSSDRDLVSRD
VRLKRFLHVFYGCPIPGMEPAGRLEPSENGPLLSLVRKMNNCLSQMEQFPVKVHDFPSGN
GNGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYG
RIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQFSL
QAEEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGTKDVVGGKRGRAQTAPTKTSP
RNAKKQDELWHDGVCPSVASPLEMYLMSEPPESITFDDPSLDVNLLLRVLHSISSYWFYL
YDNAVSKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQ
MLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINREELLKQAESVMQD
LGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVALSNPKGSQEGTK
YMFSSRGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLR
HETSISSHDLVNIDPGVAKSIQHLEDIIRQKKRLEQDRSQVSPRYTTSPDAANLSHYNLS
LTRETLQQALESLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIYNLEEYLRLVVY
WTMNEGVSRQFESFREGFESVFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDH
GYTHDSRAVRFLFDVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTE
NPDDFLPSVMTCVNYLKLPDYSSIEIMRKKLLIAAREGQQSFHLS
NT seq
6258 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccatacagtcgcgggaaggttgcagtcagagcaggtaaaa
cataaagcaaattcccctcctgaaagtagaagacctaaatctaaggcttccaaagccgca
cccagctcagcctctggccagtccagagggcacagctcaagaagcagtctgtcactgtct
gtggcttcatttgtgctgcaagacgacccagaggccgcagggacatcagagcgagagcca
acaggacaccaatccaagactgaaggcaccacccgagggttgaagagaaattctgcacct
gacctcaacacctacacctccaccccagccaagaagtcaaaatccaaccccccacccaga
gaccataccactgaggccaagaaaggccctgccaaatcctccaagaagagacccctggct
ccagagccgcctacaggctgtggccagagcaagaagagcggggccgctggggcttcaccg
actctgaaacggaagaaggctgactccctcccctgtctgagcagcactgctgggtcgctc
cccaaccgtaccgacggcagatctgcaaaacccaccaagctggcgtcgaagtcggccgcc
tcagccaaagctgggtgtagcacggtgactgactcctcctcttctgcctccacctcttcc
tcctcctccacaggcacaaacagtgccattgccgcacagggcgccaggctcaagcagggc
aaagaccagaacaaggcacgtcgttcccgctccgcctccagcccctccccacgccgaagc
acccgtgacaaggagcaggccaaaacctccgtctcgtccaagtttgagtgggcggcccgc
ttcagtcccaaagtcaacctgccaaagcccaaactgtccctacccagctcctccaagaca
gagaccgcctccaaacctgggccctcaggactacaagccaaactagcaagtttgaggaag
tccactaagaagcgcagcgagtctcctccagcagagctccccagctttcggcggagcaca
cgccagaagaccacgggctcctgcgccagcaccagtcggcgaggctcaggcctgggcaag
cgcggggcagccgaagctcgccgacaagaaaagatggctgactcggacaacaaccaggat
gggaccaactcctcggccgcccgcactgatgaggccccgcagggggcttcgggtacagct
tctagctcagtggccggagctgtagggatgaccacatccggtgagagtgagtccgatgac
tctgaaatgggcagactccaagccctgctggaggccaggggtcttcccccacacctcttt
gggcccctgggaccccgcatgtcccagctgtttcacagaactataggcagtggagccagc
tccaaggctcagcagctgctgcagggcctgcaggccaccggtgacgagtcccagcagctc
caggccgctatcgagatgtgccagctgctagtgatgggcaacgaggagacgctcggaggc
ttccccgtgaagagcgtggtgcccgctctgatcacattgttacagatggagcataacttt
gacattatgaaccacgcctcccgtgctctcacttacatgatggaggcgctgcctcggtcc
tctgctgtggtcgtggatgccatccccgtcttcctggaaaagcttcaggtgattcagttc
attgacgtggcggagcaggccctgactgccttggagatgttgtcaaggcgacacagcaaa
gccatcctgcaggctggtggcttggctgactgtctgctgtacctggagttcttcagcatc
aacgcccagaggaatgccctggccattgccgccaactgctgccagagcatcacccctgac
gagttccactttgtctctgactctctgccactgctgacccagagactcacacaccaggat
aagaaatccgttgaaagcacttgtctctgttttgccaggctggtggacaactttcaacac
gaggagaacctgctgcagcaggtggcctcgcgggacctgctgaccaacatccagcagctg
ctggtggtcacaccgcctgtgctcagctcgggcatgttcatcatggtggtgcgtatgttc
tccctcatgtgctccaactgcccctgtctggccgtgcagctcatgaagcagaatattgca
gagactctgcgcttccttctgtgcggagcggccaacggtagctgccaggagcagattgac
ctggtgccccggagcccccaggagctctatgaactcacctcactcatctgcgagctgatg
ccctgcctgcccagagagggcatctttgctgtggacctcatgctgaagaagggcagtgcc
caggccacagagggggccatttggcagtggagggacgaccggggcctgtggcacccctac
aaccgcatcgacagccgcatcattgagacggcccaccagaacggagaggacgagatcagc
ctgtccaccctgggccgcgtctacaccatcgacttcaactctatgcagcagatcaacgag
gacactggcacagcacggggtatccagaggaaacccaaccccttagccaaccccactact
gggggtcaccaggaggtgaggcgggaggatgcacgggcccagctgatgaaggaggaccct
gagctggccaagtgcttcatcaagaccctgttcggggtgctgtacgaggtgtacagctcg
tcggccggcccagccgtcagacataagtgcctccgggccatcctcaggatcatcttcttc
gcagatgctgagctcctcaaggacgtgctgaggaaccacgctgtgtccagtgtttgtctg
tttccttctcccagtcacattgcctccatgctgtccagccaggacctgaagattgtagtg
ggctctctgcagatggctgagatcctcatgcagaagctgcctgacgtattcagtgtcttc
ttcagaagagaaggtgtgatgcaccaggtgaagaacctggctgagtcagaggccttcctc
actagtcccccaaaggcgtgcaccagcggcacggctagcctgtgtaccatcagcactgca
aacactacggcggccaccaccgccaccccagacctgggctcacctagcttccagcacagc
atggacgactcactggacctcagcccacaggggcggttaagtgatgtgctgaagagaaaa
cgtctgcctaagagagggcccagaaggcccaagtactctcctcccagggacgacgacaaa
gtagacaatcaggccaagagtcctaccactactcagtcccccaaatcctccttcttggcc
agtctgaaccccaagacctggggcaagctaggcacccagaccaacagcaccaactctgag
ccctctcgcacggctggtgtgagtggcctggcacgcgcccttcccaaggactctgtctcc
aacaacagggacaagattaaggcttggatcaaagagcaggcctgtaagtttgtggcacgt
tacttcaacactgaaaacattgatggcagcaaccctgcactaaatgtactccagagactc
tgcaccgccacgcaacagctcagcctacagatggacgggggcgtggagtgcctcgtggag
atctgcagcatcgtgtcagagtcggacgtgtcatcgttcgagatccagcacagcggcctg
gtcaagcagctgctgctctacctgacctccagcagtgaccgtgacctggtcagccgtgac
gtccgcctcaagaggttcctgcacgtcttctatggctgcccgatcccggggatggagccg
gcaggccgcctggagccgtctgagaacgggcccctgctgtcactggtgcgcaagatgaac
aactgcctaagccagatggagcagttccctgtcaaggtgcatgacttccctagtggcaac
ggcaacgggagcagaggttctcaggctctgaagttcttcaacacacaccaactcaagtgt
cagctgcagaggcacccggactgcaccaatgtgaagcagtggaaggggggcccggtgaaa
attgaccccctggctttggtacaggccattgaacgctacctggtggtccgaggttacgga
cgaataagagaggaggatgaggacagcgacgatgatggttcagacgatgaaattgatgaa
tcgctggcggcccagttcctgaactcgggcagcgtgcgccaccggctgcagttctacatc
ggtgaccacctgctgccctacaacatgacggtttaccaggcagtgcggcagttcagcctg
caggcagaggaggagagggagtcaacagacgacgaggccaacccgctcggacgggccgga
atctggaccaaaacccacaccatatggtataagccagtgagggaggatgaggatggcact
aaagatgtggtgggagggaagaggggccgggcacagactgcccccaccaagacctcgccc
cgcaatgccaagaaacaggacgagctgtggcacgacggcgtgtgtcccagcgtggccagc
ccgttggagatgtacctcatgtcagaacccccagagagcatcaccttcgacgacccctct
ctggatgtcaacctgctgctgagggtgctgcactccattagtagttactggttctacctg
tacgacaatgctgtgtctaaggagatcatccccaccagtgagttcatcaacagtaagctg
acagccaaggccaaccgacagctgcaggaccctctggtcatcatgaccggcaacatcccc
acctggctcacagagctcggcaagacctgtcccttcttcttcccattcgacacacggcag
atgctcttctatgtgactgcttttgaccgcgaccgggccatgcagcgcctcctcgacacc
aaccccgagatcaaccagtcagattcccaggacagccgcgtggcgccccgcctcgacaga
aaaaagcgaacgataaaccgcgaggagctgctgaagcaggcggagtctgtgatgcaggac
cttggcagctccagagccatgctggagatccagtatgagaacgaggtgggcacagggctg
ggtcccaccctggagttctacgccctggtctcccaggagctgcagagggctgacctcggg
ctgtggaggggtgaggaggttgccctgtccaacccaaaaggaagccaagaagggaccaag
tacatgttcagctcccgagggctgtttgccgttccctttggcaggacaaccaaaccggcg
cacatcgccaaaatcaagatgaagttccgcttcctgggcaagctgatggccaaggccata
atggacttcagactgctggacctgcccctggggctgcccttctacaagtggatgctgcgg
cacgagacgtcaatcagctcccacgacctggtcaacatcgacccgggcgtggccaaatcc
atccagcacctggaagacatcatccgccagaagaagaggctggagcaggaccgctcccaa
gtcagtccccgatacacaacctccccagatgcagctaacctcagtcattacaatttgtct
ttgacgagggagaccctgcagcaggctctggagagtctcaacatgaacggctgctctgtg
gaggacctgggcctggacttcaccctgcctggtttccccaacatcgagctgaagaaggga
ggcaaggacatccctgtcaccatctacaacctggaggagtacctcaggctggtggtctac
tggacgatgaacgaaggcgtgtcccggcagtttgaatctttcagggaagggtttgagtca
gtcttccccctgcatcacttgcagtatttctaccctgaagagttggatcagctgctttgt
ggcagcaagtccgagacctgggacgtcaagaccctgatggagtgctgtcggcccgaccac
ggctacacgcatgacagtcgtgctgtgaggttcctgtttgacgtgctcagcagtttcgat
gcagagcagcagagacttttcctgcaatttgtaacaggaagccccaggctgcctgttgga
ggtttccgtagtctgaacccgccgctgaccatcgtgcggaagacatttgaatcgacggag
aacccggacgacttcctgccgtccgttatgacctgcgtcaactacctgaagctgcctgac
tactccagcatcgagatcatgcgcaagaaactgttgattgcggcccgtgagggccagcag
tccttccacctgtcctga
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integrated database retrieval system
