Salmo trutta (river trout): 115163313
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Entry
115163313 CDS
T08542
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115163313
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115163313
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Ank_5
Egg_lysin
BAR_4
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
115163313
NCBI-ProteinID:
XP_029570951
Ensembl:
ENSSTUG00000019246
LinkDB
All DBs
Position
26:complement(18255741..18279048)
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AA seq
928 aa
AA seq
DB search
MSRLYYRKTDNSSYRDRIALRIVRAESELSGLERNYLGAVEKGDYASVKQALEEAEIYFR
ININCIDPLGRTALLIAIENENLEIIELLLTYNVYVGDALLHAIRKEVVGAVEMLLNHKK
PSGEKQVPPILLDKQFSNFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCME
CVSSSDVDSLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELELILNYRDDINPLLDENTNDLARLKLAIKYTQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFLTCVFIGLLFPLFSLCYLVSPKSRYGLFIR
KPFIKFICHTTSYLTFLFLLLLASQHIVSTDPNRQGPPPTVVEWMILPWVLGFIWTEIKQ
MWDGGFQDYIHDWWNLMDFVMNSLYLATISLKIVAYVKYSGFRARNEWQMWHPTLVAEAV
FAIANIFSSIRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETDEGLKGCKGIRCATQNNAFSTLFETLQSLFWSIFGLISLYVTNVEADHQFTEFVGAT
MFGTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPFNI
IPSPKSIWYFICWIRKHIFKITRAKKTETFGTIGRRAAINVRINHQYQEVLRNLVKRYVA
AMIRDAKTEEGLTEENFKELKQDISSFRYEVLGMMKGKVGPGGGGVALAGSKPSEEAGAS
ILVYPDHSFKYSPEFSTAAPKTNMFPDTTSILQQRVAPSSTSSSTSPSTSQGLNRLVNGS
VVPSWASIDTSSTPISSSSSTPIHASTKDKLARKDFPKDICDFGLYSVSEEMGEADLEVL
DCDGEKEEQGGARERMCTEKEENEGRGE
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgactgtactacaggaagacagacaactcctcctacagggacaggatcgctctg
aggattgtcagggccgagtctgaactgtctggcctggaaaggaactacctgggagcagtg
gagaaaggagactacgcctcagtcaaacaggctctagaggaggcagagatctacttccgg
atcaacattaactgtatagacccgttgggccgcacagctctgctgatcgctatagagaat
gagaacctggagattatagagctgctgctcacctataacgtgtacgtcggtgacgctctg
ctacacgccatccgtaaagaggtggtgggggccgtggaaatgctgctcaaccacaagaag
cccagcggggagaaacaggttcctcccatcctattggacaagcagttctctaactttact
cctgacatcacacccatcatcctggcagctcacaccaacaactatgagatcatcaaactg
ctggtgcagaagggggtgtccatgccccagccacatgaggtgcgctgtaactgcatggag
tgcgtgtccagctctgatgtggatagtctgcgtcactcccgctctcgtctcaacatctac
aaggccttgtccagcccatcactcatagctctctccagtgaagaccctttcctcacagcc
ttccagctctcctgggaactacaggaactcagcaaggtagagaatgagtttaagtcggag
tatgaggagttatctcagcagtgtaaacagtttgccaaggacctgttggaccaaaccagg
agttccagagaactagaactgatcctgaactacagagacgacatcaaccctctactggat
gagaacaccaacgacctggccagactcaaactggctatcaaatacacacagaaagagttt
gtagcccagcccaactgtcagcagctgcttgcgtctcgttggtacgatgagttccctgga
tggaggcgtcgtcactgggcagggaagttcctaacctgtgtcttcatcggcctcctcttc
cccctcttctccctctgctacctggtctctcctaagagccgctatggactcttcatcagg
aagcccttcatcaagtttatctgccacacaacgtcgtatctcaccttcctgttcctgctg
ctgctggcctcccagcacatcgtctctacagaccccaacaggcaggggccgcctcctacg
gttgtggaatggatgatactaccctgggtactgggcttcatctggacagagattaaacag
atgtgggatggagggttccaggactatatccatgactggtggaacctcatggactttgtt
atgaactctctgtacctggctaccatttctctgaagatcgttgcctatgtcaagtacagt
ggcttcagggccaggaacgaatggcagatgtggcatcctaccctggtagcagaggctgtg
tttgccattgctaacatcttcagctccatccgcctcatctctctgtttacagctaactcc
cacctgggacctctacagatctctctgggcaggatgctgctggacatccttaagttcctg
tttatctactgcctggtgctcctggccttcgctaacgggctcaaccagctctacttctac
tacgagacagacgagggactgaagggatgcaagggcatccgctgcgcaacacagaacaac
gctttctcaacgttgtttgagacgctccagtcgttgttctggtctatctttgggttgatc
agtctgtatgtgaccaacgtggaggcagaccaccaattcacagagtttgtaggggccacc
atgtttggaacctataatgtcatctctctggtggttctactcaacatgctgatcgccatg
atgaacaactcataccaacacatcgctgatcatgcagacattgagtggaagtttgcaaga
accaagttgtggatgagttactttgaagagggggggactctgccttctccattcaacatc
atccctagccccaagtcaatctggtacttcatctgctggatcaggaaacacatcttcaag
atcaccagggccaagaaaacagaaacatttggaaccatagggagacgggctgctataaac
gtcagaataaaccaccagtatcaggaggttttgaggaacctggtgaagagatatgtagca
gccatgatcagagatgccaagacagaggaaggactgactgaggagaactttaaggagctg
aagcaggacatctccagctttaggtatgaggtcctggggatgatgaaggggaaggtgggg
cctgggggtgggggcgtggctctagcaggaagtaaacccagtgaagaggcaggggcctcc
attctggtctaccctgaccactccttcaagtactccccagagttctcaacagccgcgcct
aagaccaacatgtttcccgacaccacgtccatactccagcagagggtagccccctcctcc
acctcctcctccacatccccttccacctctcagggcttgaaccgactggtcaacggctct
gtggtaccctcttgggcctccattgacacctcctccactcccatctcctcttcctcctcc
actcccatccatgcctccaccaaagacaagctggccaggaaagactttccaaaagacatc
tgtgactttgggctctactctgtgtctgaggagatgggggaggctgacctggaggtgctg
gactgtgatggagagaaggaggagcagggtggagcgagggagaggatgtgtacagagaag
gaagagaacgaagggaggggagagtga
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