Salmo trutta (river trout): 115163320 Help Entry 115163320         CDS       T08542                                  Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism stru  Salmo trutta (river trout) Pathway stru04519   Cadherin signaling Brite KEGG Orthology (KO) [BR:stru00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04519 Cadherin signaling     115163320  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:stru04515]     115163320 Cell adhesion molecules [BR:stru04515]  Cadherins   Cadherin related    115163320 SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Ig_CLSTN Cadherin_CELSR2_9th Ig_Cad99C_N Fibulin_C Cadherin_pro LapA_dom TED6 CADH_Y-type_LIR Motif Other DBs NCBI-GeneID:  115163320 NCBI-ProteinID:  XP_029570965 UniProt:  A0A673ZV83 LinkDB All DBs Position 26:complement(18566561..18766571) Genome browser AA seq 3310 aa AA seqDB search MKTEAKGLGRSVSRSLQDEGRWSRGVLLLAYILLELITVHSSTVLGNLELQLDEEQPAGT IVGDISAGLPPGVTASLYFISDHEGTGVGSDLDIDESTGIIKTAKVLDHELRDRYNFIAV TMTGLTIEVTITVNDINDHAPTFPRRRAAFKIPEMTAVGTRFPLEPAVDGDKGQLTTQGY LIKDGNPGQAFLLETRRGSNQVLYLDLVVNTLLDSETRPSYTLSLEAFDGGSPKRTGQMV LDVTVQDINDNAPVFNQSRYHAIISENLQPGSNILQVFASDADQGDNGLVLYEINRRQSD PERYFVIDSRMGVITLNKPLDFEMRRVHELVVQARDNATQPEVTNAFVTIHVRDYNDNQP TMTIIFLSEDGSPQISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDNI IYLMCVDQILDREERDTYELRVMATDAGTPPLRAESSFTIQVTDVNDNPPLFDQQEYRQA IPEVVFPGSFVLQVTARDNDQGPNGDITYSLLQDGQAGQDENQAQWFTIDPVTGIITTLS QLDYESQPRPSVTVVATDGGRPSLSSTALVHVVLQDINDNEPVFGSNFYNVSIKENTAAG SCILQVTATDADGGSFGLISYSLGSGINSAVPSQFSVGKETGQICTNVALDRDQGPTSYD FTVTAVDGGGLNSMAYVRVDLLDINDNRPVFYPVSYAVSLSSQSAPGTSVVKVTALDPDT GENGRVTYRTVPGGNSPFFTLNKDTGVISLSRSLHGKANTVIPMVVSAQDGGGLVALVNA RVNISVVAGLVAPPVFEHSQYSFTVSEDVLRGTEVGIVQAISKNGVPSKDILYSISSGDP AGYFTVDPESGALRTSLPLDHEAQPSLTLELQARSGSPPAFGQTHVHITIQDINDNTPVF LPSSSESLLLPEHTGMGTMVYRVQAQDRDSGINGQVTFDLSSTATSSGGQRTFSMERSTG EIRLVGEMSYDVTPRYDLTVTAKDGGAPQLSSTMMLVVHVQAENDQGPVFDTLTYRVELR ENTPLSTRFLQVRALSQDTTGLGSSSPLAFHLRPDGDAAGFGIAADSGWLFVKSALDREV KDMYMLMVLATAGHGQLKKTGSATVRVSVTDENDNSPRLIQARAFLAVRENLPVGSGFGR VLATDRDTGLNGRLSYRLLHPDRHFQINSHTGEISTRVGLDREQQSSYQVLLVVQDGGTP PRSATGTAFITVLDENDNTPSFRHSQPGRGLTMQVMEGQASGLLLGKVQANDPDEGENGT VFYSMSGPRAERFSLNPTTGELRSSSPLSRSDRAEYSFTVTATDRGQPSHSSTCTLHIQV QSASRVPSKANSLSMSFNSVEEAKPGSMIGSVRSHDVFELPEAGQVTYTVVGGSDRDGTF MVDRQTGDVYLARELDYERSARYTLQIEVDDFSMTLPSSHLVQLDIEVEDSNDHAPRFPE DPVTMVIPENMEPGASIYTFQASDQDGSGPNSLLTYSILHQYPDLTDLLALDPSTGVLTL AQELDHEVTSSLILVVQATDSALNASQRRWGSVTVRVFVTDENDNAPVFSSPSAVSVMED QAVGFVVLYVVARDADQGENGRVSYFIETGNAGGTFSLNPNTGSLSILKPIDREEQVLLN LTIVAQDHGVPALSSSQLLSVQVIDVNDQVPWFQENQYQAQITENQPAGTTVLVVSASDM DQGTNGQVTYGGISDEGFSIHSATGVVTTTKALDREAQEQYTLTVYARDGGVPPNFARAS VKIQVLDENDNAPAFSRLYYSLEVPENMEPVELFTLRAIDLDTGDSGEMTYKITTGDPSG DFHVDRKSGVLSTFRPLDRERRARYSLTVTALDGGSPALSSTATVEVTLLDVNDHSPQFT SPSYTADLPEDVSIGSLVLEVSATDLDQGSNSQVLYFLSRGSQGMFIIDQHTGQVITAAP LDRERTTSYTFDVCAIDSSHASPRNSTATVTVYVQDVNDNAPFFIQDPLVLNISATSVSS HRVLATMRAEDRDFGANGSLFYRFASPVRGFTINSLTGDIQATEKLQTLTQGQRTLIVEA MDQGSPAQSSLGVVVIYIREQTYRGIRFSRHARDVSLQENAAKGTAVVQTQAQYPDGSRS GISYSIFSGNTLHSFGISSSTGEIWVQSSMGLDYEETPRLRLVVKAETASSSSFMAVNLI LQDVNDNLPRFQLQNYVAYIREAQGYNFPIIQVVADDLDQGQNGQVTYSLRSSSLSGLFK IDPLTGSITTAAIMDREIWTQTKLVVTATDRGTPRLAGSATLTVIIVDLNDNSPTIPLPR EIRVPENTLIGSVITQVTGNDVDSGPTLSYTLHLDPSSQGVFGIHRYGGGVSLTAPLDYE ERTWYTLTVRATDSKHQTEANLTILVEDVNDNAPTFTHDLYQVILAEHSPAGSAVVTVTA TDRDSGENGRVTYRVRSSTRDIFYIDPSNGTLFITQQAEFDSENPSILVVIESRDMGTPA LSSTATVQVQVTDVNDNAPVFHQSEYRATVSEDGLPGATILTLEAADGDASRDNCGFDFT IASGNAGNAFQIESSVRFLEGRGFQTVGSLVLTGEGLDFEAVSSYNLTVVVSDRGVPQRS SAVSALISVTDTNDNPPAFSRAEYSVVLSEGAATGTEVLSLSATDPDSLAVGKVQYLISS GDETGMFQVDRWTGALRLQRPLDSERQASHVIIVQASDGQGHYALAPVTVEVKDINDNRP YFPLPILTASVRENQPHNTLVTMLHAIDQDTGVFGQLRYYMLDKTGEGKDAFLVNQTSGE VRTRSTFDFEKVNLFKFVALAMDAGNYSATVTIQVYVIGEDEYDPVFSDLEFSFLVPEGA KKGQSIGQVTARDEDEGVDGIVLYSLADPSPYFQVNASTGVVSLKMDSHVRHLSRAKREV RVMTLDLTAHSPLETSRVATARLTVDVTNTSFGLVSDMNLLLVSVIAVSLGAILILIFIA MALFCVRLRRQRKEQQSRCRPPASPGHGTMLHKLEETKVTGTDRSDRIYHQALPGYVSDQ TGSGGGGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEYPRVSSISSSMQEHISARGPD SGIQQDADQLSDVSCEPNIDANQWFKAKKLASLSGTLLAGQVPVYREDGGGYLGVGRGLN ISHPKDYAFPVDGKPAVDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLASVFTEIARL KDETATPNPRRPLQHKAKMDPKPPRIDPPPLITSIAHPGAKTVPVKPAPVKPSVGRSSFP HLASLRRSPISHEGSPSSVAMSPSFSPSLSPLAARSPAIIPFGVTQGPSASMISTTEHSM EHSEEAEMRI NT seq 9933 nt NT seq  +upstreamnt  +downstreamnt atgaagaccgaggccaagggtttggggcggtctgtgtcaaggtcgctgcaggatgagggc cggtggagccgaggggtcctgctgctggcctacatcctcctggagctgatcaccgtccat tcctccaccgtcctggggaacctggagctccagctggatgaggaacagccagctgggacc attgtaggggacatcagtgctgggttaccgcctggcgtcaccgcaagtctttacttcata tcagaccatgagggcaccggggtggggagtgacctggacatagatgagagcacgggcatc atcaagacagccaaggtgttggaccatgagctgagggaccggtacaacttcattgcagtg actatgacgggcttgaccattgaagtgacaatcacggtgaatgacatcaatgaccacgct cccacgttcccccggaggagagcggcgttcaagatcccggagatgacggcagtgggaacc aggttccccctagagccggcggtggatggggacaagggtcaactgactacccagggatac cttatcaaagacgggaaccccggccaggctttcctcctggagacccggagaggatccaac caggttctctatctggacctggtggtcaacactcttctggacagtgagaccagaccgtct tatactttatccctggaggcgttcgatggaggctcccctaagaggactggtcagatggtg ctagatgtgacggttcaggatatcaatgacaacgctccagtcttcaaccagagtcgctac cacgccattatctcagagaatctgcagccgggtagcaacatcctccaagtctttgcctct gacgctgaccagggagacaacggcctggttctctatgagatcaaccgcaggcagagcgac ccggagcgctacttcgtcatcgactcgcgtatgggtgtcatcacactcaacaagccgctg gactttgagatgcggagggtccacgagcttgtggtccaggcgagggataacgccacgcag cccgaggttaccaacgcctttgtcacaatccacgtccgggactacaatgacaaccagccc accatgaccatcatcttcctcagcgaagacggctccccacagatctccgagggcgcccag cctggccagtacgtcgcacgcatctccgtcaccgatccggactacggagaatacgccaat gtcaacgtctccttggaaggaggggatggaaagtttgccctgaccaccaaggacaacatc atctacctgatgtgtgtggaccagatcctggaccgagaggagagggacacatacgaactc agggtgatggctacagacgcaggcacccctcctctcagggctgagtcctcctttacgata caagtcactgacgttaacgacaaccctcctctgtttgatcagcaggagtacaggcaggcc atacctgaggtggtgttcccagggagtttcgtattgcaggtcacagctagagacaatgac caggggcccaatggagacatcacatacagcctcctccaggatggccaggctggccaggat gagaaccaggcccagtggttcaccatagacccagtaacagggatcatcaccacgctttcc cagctggattatgagtcgcagcccaggccaagtgtgactgtggtggctacagacggaggg aggccttccctgtcctccacagctctggtccatgtggtactgcaagatattaacgacaat gaacctgtgttcggtagcaacttctacaatgtatccatcaaggagaacacggccgctggg tcctgcatcctacaggtgacagcgacagacgcagacggcggctccttcggcctcatcagc tactctctggggtcaggcatcaacagtgctgtcccctcccagttctctgtagggaaggag acaggacagatctgtaccaacgtggctctggacagggaccagggaccaaccagctacgac tttactgtcacagccgtggacgggggcggtctgaactccatggcctatgtcagggttgac ctgctggacatcaacgacaacagaccagtcttctaccctgtgagctacgccgtcagcctc agctcccagagtgcacctggcacctctgtcgtcaaggttacggcccttgaccccgacact ggggagaacgggagggtcacgtaccgaaccgtccccgggggcaactcccccttcttcacc ctcaacaaagacacaggtgtgatctccctgtcccggtcgctgcatggcaaggccaacacg gtgatccccatggtggtttcagcccaggacggagggggtctggtagcactggtcaacgcc cgggtcaacatcagtgtggtggcaggcctggtggcgccccctgtgttcgaacacagccag tacagcttcactgtgtctgaagatgtattgcgagggactgaggttggcatcgtacaggcc atcagtaagaacggcgttcccagtaaggacatcttgtacagcatctcctctggagaccct gctggctacttcaccgtggacccagagagcggagccctgcggaccagccttcccctggac cacgaggcccagccttctctaaccctggagctccaggctcgtagcggcagcccccctgcc ttcggtcagacccacgtccatatcaccatccaggacatcaacgacaacacccctgtcttc ctgccctcctcttctgagtctctcctcctcccggagcacacagggatggggaccatggtc taccgcgtccaggcccaagaccgggactccggtatcaatggccaggtgacctttgacctt tcctccaccgcgacctcaagcggaggtcaaagaaccttttccatggagcgcagcacgggg gagatccggctggttggcgagatgtcgtacgacgtaacgccacgctatgacctgacggtg acagctaaagatggtggtgctccccagctgagctctaccatgatgcttgtggtgcacgtc caggcggagaatgaccaaggtcccgtgttcgacaccctgacctatcgcgtggagctgagg gagaacacgccgctcagcacacgcttcctacaggtgcgagctctgagccaggacactacg ggtttaggctcctcctctccactggcgttccacctgagacctgacggagacgcagcaggg tttggcatcgcagcagacagcggctggctgtttgtgaagagcgccctggacagagaggtg aaggacatgtacatgttgatggttctggccacggcgggccacgggcagctaaagaagacg ggcagtgccacggtgagagtgtcggtgaccgatgagaacgacaactctccccgtctgatc caggcgagggctttcctggccgtgagagagaaccttccagtgggttcaggtttcgggcgg gtgttggctacagaccgcgacacgggcctcaacggcaggctcagttacagactcctacac ccagacagacacttccagatcaactcacacacaggtgagatcagtacccgtgtaggtctg gacagggaacaacagagtagttaccaggtgttgttggtggttcaggatggaggtactccc ccgcgcagcgctacagggacagcctttatcaccgtcctggatgagaacgacaacactccc tccttcagacacagccagcctggcagaggactgaccatgcaggtgatggagggtcaggcg tcaggtctactgctggggaaagtacaggccaatgaccctgatgagggagagaacggcact gtgttctactccatgtcaggtcccagagcagagcgtttctctctgaaccctactacaggt gaactgcgttcctcctctcctctgagtcgctctgacagagctgagtacagcttcactgtg accgccactgaccgaggccagccatctcacagctctacctgtacactacatatacaggtc cagagtgcgagcagagttccttccaaagccaactccctctccatgtccttcaactccgtc gaggaggccaaaccaggctctatgattggctctgtgaggtcacatgatgtctttgagctc ccagaggccggtcaggtgacctacacggtggtgggcgggtcagaccgagacggaacgttc atggtggaccgtcagacaggtgacgtgtacctggcgagggagctggattacgagcgctcc gcccgctacacactacagatagaggtggacgacttctccatgacgttacccagcagccac ctggtgcagttggacatcgaggtggaggacagcaacgaccatgcaccccgcttcccggag gaccccgttaccatggtgatacctgagaacatggagcctggggcgtccatctacaccttc caggcctcggaccaggacggatcagggcccaacagcctgctgacctactccatcctgcac cagtaccctgacctcactgacctcctggcccttgacccttccactggcgtcctgaccctg gcgcaggaactggaccatgaggtcacttcctcccttatcctggtcgtccaggcaacagac tccgccctgaacgccagccaacggcgctggggctcggtgacggtgagggtgtttgtgaca gatgagaatgacaatgctccagtgttcagctcgccatctgcggttagcgtcatggaggac caggctgtgggcttcgtggttctctacgttgtggcgcgagatgccgaccagggggagaac ggacgggtcagctacttcatcgagactggcaacgctggagggacgttcagcctcaaccct aatactggttccctctctatcctgaagcccattgaccgggaggagcaggtcctgttgaac ctgaccattgtagcccaggaccacggggtaccagcgctctcatccagccagctgctgtct gtccaggtcatcgatgtgaacgaccaggtgccctggttccaggagaaccagtaccaagcc cagattacagagaaccagcctgcaggaaccactgttctggtggtgtcggcctccgacatg gaccaaggtaccaacggccaggtgacatatggaggcatctctgacgagggttttagcatc cactcagctacaggtgttgtaaccaccactaaagccctggacagagaggcacaggaacaa tacacactgacagtgtatgcccgagacggtggcgtgcctcctaactttgcccgggcgtca gtgaagatccaggtgttggatgagaatgacaacgccccagcgttcagtagactgtactac agtctggaggtgcctgagaacatggagcctgttgagcttttcaccctcagagctattgac ctggacactggggacagcggagagatgacctacaagatcacaacgggcgacccctcaggt gacttccatgtggacaggaagtcaggtgttctctccaccttcagaccactggacagggaa cgtagggccaggtacagtctgacagtgacagcccttgacgggggctctccagccctgagc agcacagccacagtagaggtcactctcctggacgtcaacgaccacagcccccagttcacc agccccagctacaccgctgacctccctgaggatgtttctattggctccctggtgctggag gtctctgctactgacctggaccaagggtctaacagccaggtgctgtacttcctgtcgcgc ggctcccagggcatgttcatcattgaccagcacacggggcaggtcatcaccgctgctccg ctcgaccgggaacgaaccacgtcgtacactttcgatgtctgcgccatagactcgtcccac gccagtcctcgcaactccaccgccacggtcaccgtgtatgtacaggacgtgaatgacaac gctccattcttcatccaggaccccctggtcctcaacatctcagccaccagtgtctcctcc catcgcgtcctggccacaatgcgggcagaggaccgtgattttggggccaacggctcactg ttctaccgcttcgccagccctgtccgaggcttcaccatcaactctctgaccggggacatc caggctacagagaagctgcagacactgacccagggccagaggactctgatcgtagaggct atggaccagggcagcccagcccagtcctctctaggggtggtggtcatctacatcagagaa cagacctacagggggatccgcttctcacgccacgctagagacgtcagcctgcaggagaac gccgccaaaggtaccgccgtggtgcagactcaggcccagtaccctgatggatcccgtagt ggcatcagttacagcatcttcagcggcaacaccctacactcctttggaatcagctcctcc actggtgagatctgggtacagagctccatggggctggactatgaggagacccctagactc cgcctagtggtgaaggctgaaactgcatcctccagttccttcatggcggtcaacctgatc cttcaggacgtcaatgacaacctgccacgcttccagctgcagaactatgtagcctacata cgagaggcacagggatataatttccctatcatacaggtggtggctgatgacctggaccag ggccagaatggtcaggtgacctacagcctgaggtcgtcgtctctcagcggcctgttcaag attgacccgctgaccggaagcatcaccaccgccgctatcatggaccgagagatctggaca caaaccaagctggttgttacggcaacggaccgcggcacaccacgattggccggctcggcg accctcacggtgataatcgtggacctcaatgacaatagtcctacaatccccttgccgcgc gagatcagagtgccagagaacactctgattggctcggtaataacccaggtgactggaaac gacgttgactcaggcccaaccctgtcctacaccctccacctggacccgtcctcccagggc gtgtttgggatccatcgctacgggggcggggtgtctctgaccgcccctctggactacgag gagaggacctggtacacgctgactgtcagggcaactgactccaaacaccagactgaagct aacctcaccatactggtggaggatgtgaatgataacgctcctactttcacacatgatctt taccaggtgattctggcagagcactccccagctggcagtgcagttgtcactgtgacagcc acggaccgagactctggagagaacggccgcgtcacgtacagagtgaggtcatcaacccgg gacatcttctacatcgaccccagcaatggtaccctgttcatcacccagcaggcagagttt gactctgagaacccttctatcctggtggtaatagagtccagagacatgggaacaccagcc ctctcctccactgctactgtacaggtccaggtgactgacgtcaacgacaacgcgcccgtc ttccaccaatcagagtacagagccacggtgtcggaggacggccttccgggcgccaccatc ctgaccctggaggcggctgacggcgacgcatcacgcgacaactgcggcttcgacttcact atagccagcggaaacgcaggcaatgccttccagatcgagagcagcgtacgcttcttggaa ggacggggcttccagacagtaggcagcctggtattgaccggtgaggggctggactttgag gcggtgtccagttacaacctgaccgtggtcgtgtcagaccgcggcgtgccccagaggagc tcggctgtctctgcgctgatcagtgtgacggacactaacgacaaccctccggcgttcagc agggcagagtacagtgtggtgctgagtgaaggagcagccacagggactgaggtcctcagc ctgtctgcaacagacccagactccctggccgtagggaaggtgcagtacctgatcagctct ggggatgagacgggtatgttccaggtagaccgctggactggagccctgaggctgcagaga ccactggacagcgagagacaggcatcccatgtgatcattgtgcaggcgtcagatggacag ggtcactatgcgctggctccagtcactgtggaggtgaaggacattaatgacaacagacct tacttccctctgcccatcctcaccgccagcgtcagagagaaccagcctcacaacaccctt gtcaccatgctgcacgccatcgaccaggacacgggagtcttcggacagctgaggtactac atgttggacaagactggagaggggaaagacgccttcctggtcaaccagacgtcaggcgag gtccggactcgctccacctttgactttgagaaggtcaacttgttcaaatttgtagctctg gccatggatgcagggaactactctgccacggtgaccatccaggtgtacgtgataggggag gatgagtacgaccctgtgttctccgacttagagttctccttcctggttcctgagggggcg aagaagggccagagcatcggtcaggtgacagccagagacgaggacgagggagtggacggg attgttctgtactccctagctgacccctcgccctacttccaggtcaatgcatcgacgggt gtggtttccctgaagatggacagccacgtccgacacctgagtagggccaagagggaggtc cgtgtgatgactcttgacctgacggcccacagccctctggagacgtcccgcgtggccacc gcccgtctcaccgttgacgtgactaacacatccttcggcctagtgtcagacatgaacctg ctgctggtcagtgtgatcgctgtgtccctgggagccatcctcatcctcatcttcatcgcc atggctctgttctgtgtgagactgagacgtcagaggaaggagcagcagagtcgctgcaga cctccagcctctcccggccacggcaccatgctacacaaactagaggagactaaagtcacc ggcactgaccggagcgaccgcatctaccatcaggccttaccagggtacgtttccgaccaa acagggagtggtgggggagggccatacccccgcgggggctccctggacccatcccactcc agcgggcgtggctcagcggaggcggcggaggacgatgagatccggatgatcaacgagtac ccccgtgtctcctccatctcttcgtccatgcaggaacacatctcagcccgcgggccagac tctggtatccagcaggacgctgaccagctgtctgacgtctcgtgtgagcccaacattgac gccaaccagtggttcaaggccaagaagctggccagtctcagtgggactcttctggctggc caggtgcctgtctacagggaggatggaggaggttatctgggggtagggagggggctgaac atctcccaccctaaagactatgccttcccagtggatggtaaacccgctgtggatggctcc ctcacagccatagtggccagtgacgaggagctgaggggcagttataactgggactacctg ctgaactggtgcccacagttccagccactagcaagcgtcttcacggagatagcgaggtta aaggatgagacggccactcctaaccctcgcagacctctccagcacaaagccaagatggac cccaaaccccctcgcattgaccccccgccgctaatcacctccatagcccaccctggggcg aagacagtcccggtcaagcctgctcctgtcaagccctctgtggggaggtcctccttcccc cacctggcctctctacggaggtcccccatcagtcacgagggctccccctcctcagtagcc atgtcccccagcttctccccctccctgtcccccctggccgcccgctccccggccatcata cccttcggggtcacccagggcccctcagcctccatgatcagcaccactgaacacagcatg gagcacagtgaagaggccgagatgaggatatag

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