Salmo trutta (river trout): 115163351
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Entry
115163351 CDS
T08542
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115163351
Membrane trafficking [BR:
stru04131
]
Protein recycling
Others
EARP complex
115163351
Endosome - Golgi transport
Tethering complex
GARP complex
115163351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
Syndetin_C
GrpE
FBF1
PsaD
NBD94
Sec8_N
Motif
Other DBs
NCBI-GeneID:
115163351
NCBI-ProteinID:
XP_029571007
Ensembl:
ENSSTUG00000036001
LinkDB
All DBs
Position
26:complement(19874034..19908426)
Genome browser
AA seq
830 aa
AA seq
DB search
MMEEEELEFAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRCLDDNIRTVVRGQTNVGQDGRQALEEAQVAIGQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKVAQSELGTQILADFEEAFPAQGSKRAGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYMVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITRTELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFSGCTLTDGPGVKKPETPLESTNPFLEDEIGEDGSEMEEDLDRPKKHKAPDNPFHGIIS
KCFEPHLYVYIESQDKNLGEMIDRFVSDFRAQGPPKAGTEDGGAVLPSCADLFVYYKKCM
VQCSQLSTGEPMIAFTTIFQKYLREYAWKILSGNLPKTSSNSGGLTIKSLLQEKEGSEAA
KFTVEELCLICSILSTAEYCLATTQQLEEKLKEKVDKTLVERINLTGEMDTFSNVISNSI
QLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLASTRKY
FTQFCIKFTNSFIPKFINHLFRCKTISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKAP
ASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADGNPETFQKTLDMKGLKRSE
QSSMLELFRQRLPTPPSGTDGGPSLSFSTPTPEQENSRIRKLEKLIKKRL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaagaattggaatttgcggaggatttggaggctattttgcaccttact
ccagaggtgcagttggccatcgagcaggttttccccagtcaagacccattggacagagca
gattttaatgctgtggaatacatcaatacattgtttcctactgagcagtcactggctaat
atagatgatgtggtcaacaagatccgtctgaagattcggtgtctggatgacaacatcagg
acggtggtgagaggccagaccaatgtgggccaggatggcagacaggcacttgaggaggct
caggtagccattggccagctctttggcaaaatcaaagacattaaggacaaggctgagaaa
tctgagcaaatggtcaaggagataacgcgggacatcaaacagctggaccatgctaagcgt
cacctgaccacctccatcaccaccctcaaccacctgcacatgctggccgggggcgtggac
tctctagaggcaatgacgaggaagaggcagtatggagaggtggctaacctgctacagggt
gtagtcaacgtcctggagcacttccacaaatacatgggcatccctcaaatcagacagctc
tcagagagggtgaaagtggcccaaagcgagctggggactcagatccttgcagactttgaa
gaggccttccccgctcaggggtcaaagagagcagggggacccagtaacgttctgagggat
gcctgtctcgtggccaacgtcttggacccccgcatcaaacaggagatcatcaagaagttc
atcagacagcacctctctgagtacatggtgctcttccaggagaaccaggatgtagcttgg
ctggataagatcgaccggcgctacgcctggattaagcgtcagctggtggactatgaggag
aagtacggacgcatgttccctgaagagtggtgtatgactgaacgcatcgctgtggagttc
tgccacatcaccaggacagagctggccaaagtgatgcggacgcgggccaaagagattgag
gtcaagctgcttctgtttgccattcagaggaccaccaacttcgaggggctgctcgccaag
cgcttctctgggtgcaccctcaccgacgggcccggggtgaagaagccagagacaccactg
gagtccaccaaccctttcctggaggacgagattggagaggatgggtcagagatggaggag
gatctggataggcccaagaagcacaaggctcctgacaaccccttccatggcatcatttcc
aagtgcttcgagcctcacctctatgtctacatcgagtctcaggacaagaacctgggggag
atgattgaccgttttgtgtcagacttccgggcgcagggcccccccaaggctggcacggag
gacggtggagcggtgctgcccagctgtgctgacctgtttgtctactataagaagtgcatg
gtgcagtgctctcagctcagcacaggggaacctatgatcgccttcaccaccatcttccag
aagtacctcagagagtatgcctggaagatactgtctggaaacctgcccaagactagcagt
aacagtggaggactgaccatcaagagtctactgcaggagaaggagggttcggaggctgct
aagttcactgtagaggagctgtgtctcatctgtagcatcctcagtactgcagagtactgt
ctggccacaacacagcagttggaggagaagctgaaggagaaggtggataagaccctggtg
gagagaatcaacctgactggagagatggacaccttcagcaatgtgatctccaacagtatc
cagttgcttgttcaggacctggacgctgcctgtgaccctgctctcactgccatgagcaag
atgccatggcagagcgtagagcatgtaggtgaccagagtccctacgtgacgtcagtcatc
atgcacatcaaacagaacgtccccatcatcagagataacctggcctccacacgaaaatac
ttcacccagttctgcatcaagttcaccaactctttcattcctaaattcatcaaccacttg
ttcaggtgtaagactatcagcatggtgggggctgaacagctcctcctggacacccactcc
ctgaagacggtgttgttggatctgccctctatagggtctcaggtggtccgcaaggcccca
gccagctacaccaagatagtcgtgaaggggatgacccgcgctgagatgatcctcaaggtg
gtcatggccccccatgaaccgtctgtggtgtttgtggataactacatcaagctcctcgct
gacgggaacccagagaccttccagaaaactctggatatgaaggggttgaagcgcagtgag
cagagcagcatgttggagctcttcagacagaggttacccactccaccctcagggaccgac
ggaggcccctctctctccttcagcacccccacccccgagcaggagaactcgcgcatacgc
aaactggagaagctcatcaagaagagactctga
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