Salmo trutta (river trout): 115163357
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Entry
115163357 CDS
T08542
Name
(RefSeq) lissencephaly-1 homolog A-like
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru00565
Ether lipid metabolism
stru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
115163357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115163357
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115163357
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115163357
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115163357
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Nup160
LisH
eIF2A
Nucleoporin_N
Pox_A_type_inc
ARMC9_LisH
DUF2570
LisH_2
DUF6813
Motif
Other DBs
NCBI-GeneID:
115163357
NCBI-ProteinID:
XP_029571019
Ensembl:
ENSSTUG00000045127
LinkDB
All DBs
Position
26:20034837..20098474
Genome browser
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDVNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPIAQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGILVHPGGKFILSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKNAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggttttgtcacaacggcaacgagacgaactaaatcgagcgatagctgattaccttcgt
tcaaatggatatgaagaggcatattcaactttcaagaaggaggcagaattagacgtgaat
gaagaattggataagaagtatgccggccttttggaaaagaaatggacctcagtcatcaga
ttacaaaagaaggtgatggaactggagtcgaagctgaacgaggccaaggaggagatcacc
ctaggtgggcccatagcccagaagcgtgaccccaaagagtggatccctcgcccgccggag
aagtacgcgctgagcggccaccgctcccctgtcacacgcgtcatcttccacccagtcttc
agcgtcatggtgtctgcctccgaggacgccacaataaaggtgtgggactatgagacagga
gactttgagcggacgctgaagggtcacactgactctgtccaggacatctcctttgaccag
actggcaagctgctggcctcctgctctgcagacatgaccatcaaactgtgggacttccag
ggctttgagtgcatcagaaccatgcatggacacgatcacaatgtttcgtccgtagccatc
atgcccaatggagatcatatagtatctgcctcaagggacaaaaccattaaaatgtgggag
gtggccactggctactgtgtgaagacgttcacgggccacagggagtgggtgaggatggtc
cggcccaaccaggacggcaccctgatcgccagctgctccaatgaccagactgtgcgcgtg
tgggtggtggcgtccaaagagtgcaaggccgagttgcgggagcacgaacacgtggtggag
tgcatctcctgggcccctgagagcgctcatcccaccatcttggaagccaccggctcagag
tctaagaagagtggtaagccgggcccgttcctgctgtctggctccagagacaagactatc
aagatgtgggacgtcagcattgggatgtgccttatgacactggttggccatgataactgg
gtgcgcgggatccttgtccaccccggaggcaagttcatattgagctgtgctgacgacaag
accttaaggatctgggactacaaaaacaagcgctgcatgaagactctgagtgcccatgaa
cactttgttacgtctctggatttccacaagaatgcgccgtatgttgtcaccgggagcgta
gatcaaacagtaaaagtgtgggagtgtcgctga
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integrated database retrieval system