Salmo trutta (river trout): 115163419
Help
Entry
115163419 CDS
T08542
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A-like isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115163419
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115163419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
115163419
NCBI-ProteinID:
XP_029571125
Ensembl:
ENSSTUG00000048716
UniProt:
A0A674EP56
LinkDB
All DBs
Position
26:complement(21763776..21784162)
Genome browser
AA seq
582 aa
AA seq
DB search
MFSKMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPNGFGVKLENLQMSPPSSKI
NGNDSKPVFLTLTNGHSKGKLSGDEGSEDGDDFDTPPILKELQSLNTEEAAEQREEVDRI
LAEDPWRAARMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYV
RKQREVLRQFNQAVQGSDSNMTDKGSQDQVLFFFPEFNPPGQGMGQQGEEVGSEPSCKKM
RRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLV
TEVRVYNWFANRRKEEAFRQKLAMDAYPIPTHSMNPLLSHSHSSPHHHSSQISASPPSKM
QVRYSQQGPGEVSSSTTISHHGSMATSQSVLQQVSPGSLDPSHSLLSPDAKMMSASGGGL
PPVSTLTNIHNSHHTHQQTQNLIMPLSGVMTIAQSLNTSQSQSVPVINSVAGSLAALQPV
QFSQQLHSPHQHGLMQQSPSHMNQQPFMATVTHSHSQYLPLMYPHKQEPPQYSHQSRFPS
AMVVTDANSLSTLSSMSSSKQDSTVNKMVQLGGLSWCPLQAW
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgttctctaaaatggtgtccaagttgacatctctccaacaggagctcttgagcgccttg
ttagattccggagttaccaaagatgttctgatccaagcgttggacgatatggatcctagc
ccgaatggctttggagttaaattggagaatctacagatgtctccgccaagttctaaaatc
aacggaaatgattcgaagccggtatttcttacgttgaccaatgggcacagtaagggcaaa
ctgtcgggagatgaggggtccgaggacggggacgatttcgataccccacctatactgaaa
gaactccagtcacttaacaccgaggaagcagcggaacagagggaagaagttgaccgaata
ttagctgaggacccctggcgtgccgctcgcatgatcaaaggctacatgcaacagcacaac
ataccacaacgtgaggtggtggatgtaaccgggctaaatcagtctcacctctcacagcac
ctcaacaaaggcacgcccatgaaaactcagaagcgagcggcgctctacacctggtatgtc
aggaaacagcgggaagttctcagacaattcaaccaggcagtgcaaggttctgacagcaat
atgaccgacaaaggcagtcaggatcaggtgctgtttttcttcccagagttcaaccctcct
ggtcagggtatggggcagcaaggggaggaggtgggctctgaaccctcctgcaagaaaatg
agacggaaccgttttaaatgggggcctgcatcccaacagatcctctaccaggcctatgaa
agacagaagaaccccagcaaagaggagcgggaggcgctggtggaggagtgcaacagggct
gagtgtcttcagagaggggtgtctccgtctaaagcgcatgggctgggctctaacctggtc
actgaggtacgggtctataactggtttgccaaccgtcgtaaggaggaggccttccgtcag
aagctggcgatggacgcctaccccattcccacccacagcatgaaccctctcctgtctcac
agccacagctccccacaccaccacagctcccagatcagcgcatccccccctagtaagatg
caagtgcggtacagccaacagggacccggtgaggtcagctcctcgacgaccatcagtcac
cacggcagcatggcgaccagccagtcggtgttacagcaggtgtctccgggcagcttggac
cccagccacagtctgctgtcacctgacgccaagatgatgtctgcgtcaggtggaggcctg
ccacctgtgagcacgctgaccaacatccacaactcccaccacacacaccagcagacacag
aacctcatcatgcctctctctggagtcatgaccatcgcacagagtctgaacacgtcgcag
tcccagtcagtgccggtgatcaacagcgtggcggggagccttgcagcgctgcagccggtg
cagttctcccagcagctccacagtccccaccagcatggcctgatgcagcagtcccccagc
cacatgaaccagcagcccttcatggccaccgtgactcattcacacagtcagtacctgcct
cttatgtaccctcataagcaggagccaccgcagtattcccaccagtcacggtttccctca
gccatggttgtgacagacgccaacagcctcagtactcttagctccatgtcatccagcaaa
caggattctaccgtaaacaagatggtgcaactggggggtctctcctggtgtcctcttcaa
gcctggtga
DBGET
integrated database retrieval system
