Salmo trutta (river trout): 115163438
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Entry
115163438 CDS
T08542
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03030
DNA replication
stru03420
Nucleotide excision repair
stru03430
Mismatch repair
stru03440
Homologous recombination
stru03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115163438
03420 Nucleotide excision repair
115163438
03430 Mismatch repair
115163438
03440 Homologous recombination
115163438
03460 Fanconi anemia pathway
115163438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115163438
03032 DNA replication proteins [BR:
stru03032
]
115163438
03400 DNA repair and recombination proteins [BR:
stru03400
]
115163438
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115163438
DNA replication proteins [BR:
stru03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
115163438
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
115163438
MMR (mismatch excision repair)
115163438
DSBR (double strand breaks repair)
HR (homologous recombination)
115163438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
115163438
NCBI-ProteinID:
XP_029571154
Ensembl:
ENSSTUG00000049208
UniProt:
A0A674ERV1
LinkDB
All DBs
Position
26:22311780..22360215
Genome browser
AA seq
607 aa
AA seq
DB search
MANMLTKGAIEALTKGSNDVQNTILQLVNIRKIDGGSGPARFRLMMSDGQHSMSSFMLST
QLNPMAEDNRLAPNCICQLKRTVTNVLKDGRRVVVILDMEVVKSADEVAGKIGEPQPYVE
GQSKAPQSAPNPSVHPLPPQNGIDGSMNKGPSREFGGKKGMPPSAMPSTPGGSAKVVPIA
SLNPYQSKWTIRARVTNKSGIRTWSNSRGDGKLFSMEIVDESGEIRVTAFTQEVDKFYSI
IETGKVFYISKGSLKIANKQYSSLKNDYEMTLNGESTIIPCEDTQDVPMVQCNFVSIADL
QAREKDTILDVIGVCKSVSDVTRLNTKNNREVSKRTLNLMDQSGKLVEVTLWGEEAENFD
GSGQPILAIKGAKLSDYGGRSLSASFSSTVMVNPDIPEAYKLRGWYDKEGHSMDGQSLTE
ARTGGGGGNTNWKTLADIKTEHLGHGDKADYFSCIATIVYIRKENCLYQACPSQDCNKKV
VDQQNGMFRCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAYLGQL
KDSNEAAFEEIFQQANFHTFVFRNRVKLETYNDESRIKATVMEVKPVDHKEYSKRLIMNI
RKMASAQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggctaacatgctgacaaagggagcgatagaggccctaaccaaaggctctaatgatgta
caaaacaccatacttcaattagtgaacatccggaaaattgatggaggcagtggaccagcc
cgctttcgtctgatgatgagtgatggacagcactcaatgtcctcgttcatgctctccacc
cagctcaacccaatggctgaggacaaccgactagccccaaactgtatctgtcagctgaag
aggaccgtgactaatgtcttaaaggatggacggcgtgtggtggtcatattggacatggag
gtggtgaagtctgctgatgaggtagctggaaagatcggagagccccagccttacgtggaa
ggtcagagtaaagccccacagtcagcccccaatccctcagtccaccccctgccgccccag
aatggaattgatggctccatgaacaaaggtcccagcagagagtttggggggaagaagggc
atgcctccgtctgccatgcccagcactcctgggggatccgccaaagtcgtgcccattgcc
agcctcaacccctaccagtcaaagtggaccatccgagcccgtgtcaccaacaagagcggc
atccgcacatggagcaactctcgtggggacggcaagctgttctctatggagattgtggat
gagagtggagagatcagagtgactgcctttacccaggaggtggacaaattctacagcatc
atcgagactggcaaggtgttctacatctccaagggatccctgaagatcgccaacaagcag
tactcatccctgaagaatgactatgagatgaccctgaatggagagtccaccatcatcccc
tgcgaagacacccaggacgtacccatggtgcagtgcaactttgtctccatcgccgacctg
caggcccgagaaaaggacaccattttggatgtgattggcgtgtgcaagagcgtgtccgac
gtgacccgcctcaacaccaagaacaaccgtgaggtctccaagaggacgctcaacctgatg
gaccagtctggtaaactggtggaggtcaccctgtggggagaggaggcagagaactttgat
ggctctgggcagcccatcctggccatcaaaggggccaagctgtcggactatgggggcaga
tctctatctgcttcgttcagcagcaccgtcatggtcaaccccgacatccctgaggcatac
aagctgcggggctggtatgacaaggagggtcattctatggatggccagtctctgacggag
gcaaggacaggtggaggaggagggaacaccaactggaagaccctggctgacatcaagacg
gagcaccttggacacggagacaaggcagactacttcagctgcatcgccaccatagtgtac
atccgtaaggagaactgtctgtaccaggcatgccctagtcaggactgcaataagaaggtg
gtggaccagcagaacggcatgttccgctgtgagaagtgtgacaaagagttccccaacttc
aagtaccgactcatcctctctgccaacatagcagactacggggacaaccagtgggtgacc
tgcttccaggagagtgctgaagccatcttgggacagaacgctgcttacctagggcagctc
aaggactcgaatgaagctgccttcgaggagatctttcagcaggccaacttccacacgttt
gttttccgtaacagagtgaagctggagacctacaatgacgagtcccggatcaaggccacg
gtgatggaggtgaaacctgtggaccacaaggagtacagcaagagactgatcatgaacatc
aggaagatggcttccgcccaataa
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