Salmo trutta (river trout): 115163449
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Entry
115163449 CDS
T08542
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog isoform X1
KO
K15174
RNA polymerase II-associated factor 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115163449
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
115163449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
115163449
NCBI-ProteinID:
XP_029571180
Ensembl:
ENSSTUG00000023519
LinkDB
All DBs
Position
26:22943025..22948109
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AA seq
540 aa
AA seq
DB search
MAPTIQTQAQRDSEGHRSRSSSHRTVPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQHR
FVQYKATSLEKQHKHELLTEPDLGVTIDLINPDTYRVDPSILLDPADEKLLEEDITAPSS
SKRSQQHAKVVPWMRKTEYISTEFNRYGVSNEKVEVKIGVSVKQQFTEEEIYKDRDSQIA
AIEKTFEDAQKPIAQHYSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDMSAPQG
VEMMSQAMIRGMMDEEGNQFVAYFLPNEETIRKRKRDVDEELDYMPDDLYDYKIAREYNW
NVKNKASKGYEENYFFIFRDGDGVYYNELETRVRLSKRRAKAGAQSTTNAVLVCKHRDMN
DKELEAQDARKAQLENHEPEDEEEDMDLGKLQDSGDEKEKGSESEADNSDSDSDREDEDG
KRSGAENDDEEGVKRRRKASGSGSESGEEEVKLADEVEIFGSDDDSDNDDNEPKNGAARS
SGEEGSGSEEEEKESHRERSRSGSASPAHSSGSDHSEGGHAQSGSGSEQASDSSDGSDSE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctccaactatacagacacaagcccagcgagactcagagggtcacaggtctaggagt
tcatcacacagaactgttccagagaggtccggcgtggtctgtcgggtaaagtactgcaat
agcctgcctgacatcccatttgatcccaaattcatcacatatccatttgaccagcacagg
tttgtgcagtacaaggctacatcgttagagaagcaacacaaacatgagctgctgactgag
cctgaccttggcgtcaccatcgacctcattaacccagacacctaccgcgtcgaccccagc
attcttctggatccagctgatgagaagttattggaagaagacatcacagctccatccagc
tcgaaaagatctcagcagcacgccaaggtagtcccgtggatgaggaagactgagtacatc
tctacagagttcaacagatatggtgtctccaatgagaaagtggaagtcaagatcggtgtg
tctgtcaaacagcagttcacagaggaggagatatacaaggatagggacagccagattgct
gctattgaaaagacctttgaggatgcacagaaaccgattgcccagcactacagtaaaccc
agagtcactcctgtggaggtgatgcctgtgttccctgacttcaagatgtggatcaacccg
tgtgctcaggtaatcttcgactctgatcctgctcctaaagacatgtcagcaccccagggt
gtggagatgatgtcacaggccatgattagaggtatgatggatgaggaaggaaaccagttt
gtggcctacttcctgcccaatgaggaaacgattcgcaagcgcaagagagacgtggatgag
gagctggactacatgcctgatgatctgtatgactataagatagccagggagtacaattgg
aacgtgaagaacaaagccagcaagggctatgaggagaactacttctttatcttcagagac
ggagatggagtctactacaacgagctggagaccagagtgaggctgagtaagaggagagct
aaggctggagcccagtctactacaaacgctgtgctggtgtgtaagcacagagacatgaac
gacaaggagctggaagcacaggacgcgcgtaaggctcagctggagaaccatgaaccagag
gacgaagaagaggacatggacttgggtaaactgcaggactctggtgatgagaaggagaaa
ggcagcgagagtgaggcagacaactctgacagtgactctgacagggaggatgaggatgga
aagcggagtggagctgagaatgatgacgaggagggagtgaaacggaggaggaaggccagt
ggtagcggcagtgagagtggcgaggaggaggtcaagctggcggatgaggtggagatcttc
ggtagcgatgacgacagtgataacgatgataacgagcccaagaatggagcagcccggagc
agtggggaggagggcagtgggagcgaggaggaggagaaggagagccatagggagaggagt
aggagtggcagcgcgtctccggcccacagtagcgggagtgaccactcagagggtggccat
gcccagagcgggagtggcagtgagcaggcctcagattctagcgatggcagtgacagtgaa
taa
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