Salmo trutta (river trout): 115163561
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Entry
115163561 CDS
T08542
Name
(RefSeq) tsukushin-like isoform X1
KO
K08130
tsukushi
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
stru00535
]
115163561
Proteoglycans [BR:
stru00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
115163561
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_EndoS
LRR_RPS2
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
115163561
NCBI-ProteinID:
XP_029571415
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Position
26:complement(27038676..27047531)
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AA seq
354 aa
AA seq
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MVKNMMAFLLCVSLWMLLAVHCQAGAVKNCHPSCHCEVETFGLFDSFSLTRVDCRGVGTS
PIPIPLDTAHLDLSSNSMSLLTDTMLSGPGYTTLVSLDLSNNRISMVSPKALSRLRYLES
LDLSHNSLEGLDEGCFSGLPLAEVDLSHNHFREFDLDMFITKGHGEPINVDLSHNRLTVV
SRSSSRSPLLHVQSLTLAANQLRVVPKLKGIPLRDLSLDGNIISRIEEAAFEDLKDLVHL
SLSALPELSDIQPNSFRGLQSLQVLDLSNNAKLKTLSPAVFSGLVSLQELNLSNSGVTSL
PNNMLSHLPSIKSITLGQNIHCWRAQKQGQFHRQLGQEQKHDEVLTCDVKGIVS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagaacatgatggcgttcctcctgtgtgttagtctgtggatgctcctggctgtt
cactgccaggctggagctgtgaagaactgtcacccaagctgccactgtgaggtggagact
tttggcttgttcgacagcttcagcctgaccagggtggattgcaggggagtgggcaccagc
cccatccccatccccctggacactgcccacctggacttgtcctccaactccatgtccctg
ctgaccgacactatgctctctggacctggctataccaccttggtcagcctggacctcagc
aacaaccgcatctccatggtcagccccaaggccctgtccaggctgcgctatctggaatct
ctggacctcagccacaactccctggagggcctggatgagggctgcttctctggccttcct
ctggccgaggtggacctcagccacaaccacttccgggagtttgacctggacatgttcatc
actaaaggtcacggagagccaatcaacgtggatctgtcccacaaccggctgacggtggtc
tccaggagttcctctaggagccccttgctacatgtccagagcctgactctagcagccaat
cagctgagggtcgtgcccaagctaaaaggcatcccgttgagggacctaagcctggatggg
aacattatctcgcgcattgaggaggcggcctttgaggaccttaaggacctggttcaccta
tccctcagtgcgcttcctgagctctctgacatccagcctaacagtttcagaggccttcag
agccttcaggtcttggacctgtccaacaacgccaagctaaagacactgagcccagctgtg
ttcagtggacttgtgtctctacaggagcttaatctgtccaactctggagtaacgtcattg
ccaaataacatgctaagtcacttgccaagcatcaagagtattaccctgggccagaatatc
cattgttggagggctcaaaagcagggccagtttcacaggcagcttggacaggaacagaaa
cacgacgaggtgctaacctgtgatgttaaaggcattgtgtcgtga
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