Salmo trutta (river trout): 115163621
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Entry
115163621 CDS
T08542
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115163621
03012 Translation factors [BR:
stru03012
]
115163621
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115163621
mRNA cycle factors
Stress granule specific factors
115163621
Translation factors [BR:
stru03012
]
Eukaryotic type
Initiation factors
eIF-4
115163621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
Motif
Other DBs
NCBI-GeneID:
115163621
NCBI-ProteinID:
XP_029571508
Ensembl:
ENSSTUG00000014484
LinkDB
All DBs
Position
26:complement(29841391..29922378)
Genome browser
AA seq
1738 aa
AA seq
DB search
MNKAPQLITGPPSATHPAPSPGLQQATFPPGQPPSVVFATPPPQMNPAPQHRQFAPGPRA
LHQQGGFRSLQPYYSRPSLPSNAPRVPPSSTPRPVAPTHVYQPGQQMMMIPSQQIPFSNQ
QGPAYFIPGQYRSTYVATPQQYPVPPGTPGFYPGTSPAEYGTYAGAYYPAQQQYTSSVPA
APVIMNPPPQQQQPPPQQQIHPKRERKQVQIIIRDPNQGGKDITEEIMSGGTRSGTTPTP
PQVSDDSSESSISGSEGPAVAQADGENVTPVVVRPDDRGKPAATLITGPPAPSKTPELVK
TSPAPTEVKLPDTNSKSPSLSQDLPTPPSVTTTLHTTTPQPSTSPIADMDAPAPAAAPAP
SAPEVPAYPAPLPEPRPTPAAEEHPSPAKEEREEVKEKEEEVAEARQEVTTSSKPEPSLA
PVTTPSSSSTNGISATQPPPAKEEEPAALSINMPTPQAAEPPLESPIAQPEELRLPNGLP
LPSPQDPEKMSAESSECDVSPIAEPEVAQLQSEAPMPKPTPAPVVQATPAPVVQATPAPV
VQATPAPVAQATPALAETATTTVVTAPRVEDEMDSPPPQSTTPAGESSMQAAVSVPKKKR
KMKDLNKKEAVGDLLDAFKEEQVVGSPPEPEQATPTSASDAKEPRPAATPAVEEVDETWE
EKEDKLDAENIEPKPEDLKYQYKEELCRPIDPEEKKRYDRDFLLGFQFISAAMSKPEGLP
QISDVVLDKANKAPLRQLDPSRLPGMNMGPDFTPSFANLGRPGMGGGGGGGGGHRGGPPS
GMGGGGPRRSQQGQRKEPRRIINISSSLTEDVKLNKAEKAWKPAVKKAASGQAAPEEESD
DSEQAKTQELFKRVRSILNKLTPQMFQQLMKQVTELTIDTEERLKGVIDLIFEKAISEPN
FSVAYANMCRCLIGLKVPTTDKPGVTVNFRKLLLNRCQKEFEKDKDDDVIFEKKQKELDA
AATEEKDRLKAELEEAKDKARRRSLGNIKFIGELFKLKMLTEAIMHDCIVKLLKNHDEES
LECLCRLLSTIGKDLDFEKAKPRMDQYFAQMDKIIKEKKTSSRIRFMLQDVLDLRRNTWV
PRRGEQGPKTIDQIHKDAELEEHREVLKVQQQLLNQNTRGGGGGRGGGGRDQGSRGGQHP
QTGQRSQPQDEGWNTVPISTKSRPIDTSRLSKITKPGALDFNNQLLAPQLGGKGMWGSWG
KGSSGGTTGAKPAGEATPESGGRPATSTLNRFSALQPQQPSSSGPSHDSDRRVPQRNSSS
RDRGSDRFERHDRGSNDRFDRRDDRRDDRDRNRPPVTKRSFSRETEEHSREREHRGPADP
VRRVASMTDDRGSRDRGSRDRGSRDRARSKDNVKREAALTPPPAQNKPALSEEMLGKKST
AIIEEYLHINDMKEALQCVVEMNSTPLLFVFVRSGLESTLERSPIARERMGLLLHQLYKA
GTLPKEQYYRGLQEILEVAEDMAIDVPHIWLYLAELITPMLHEGGIPMGQLFKEISKPLV
PQGTAGVLLVQILTLLCKGMSHKKAGAMWREAGLSWKDFLPEDEDVNKFVTEKNVEFTLG
GGEDDETEKSSKKELSSEELTKQLDRLIQDKADNQRIYDWVEANLDETQMSSNMFVRAVM
TSICQSAIICESPYKLDAKVITRSAKLLHKYLKDEQKELQALYALQALMVEMEQPANLLR
MFFDTLYDEDVIKEEAFYKWESSKDPAEMQGKGVALKSVTAFFTWLREAEDEESDNNS
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaccacagcttataacaggacccccctctgccacccaccctgccccctcc
cccggactccaacaggccaccttccctcctggacaacccccctctgttgtctttgccacc
ccacctccacaaatgaacccagcgccacagcaccgacaatttgcccccgggccccgtgct
ttacaccaacagggaggattcaggtcactgcagccgtactacagccggcccagtctgccc
agcaatgccccccgggtgccccccagcagcacgccaaggcctgtggcgcccacacacgtc
taccagccgggccaacagatgatgatgatcccctcacagcagatccccttctccaaccaa
cagggccctgcctacttcatacccggacagtaccggtcaacgtacgtggccacccctcag
cagtacccggtcccaccgggcactccaggcttctacccaggcaccagcccagctgaatat
ggtacatatgcaggggcatactacccggcccaacagcagtacacgtcctcagtgccggct
gctccggtcatcatgaaccctcccccccagcagcagcaaccacctccacagcaacagatc
caccccaaaagggagcgcaaacaggtacagatcataatacgagaccctaaccagggtggt
aaagacatcactgaggagattatgtcagggggcacccgcagtggcaccacccccacaccc
ccacaggtgagcgacgactcttcagagtcgtctatatctggatcagagggtccagccgtt
gcccaggccgacggggagaacgtgacacctgtcgtggtcagaccagatgaccgagggaaa
cctgcagccactctcataactggccccccagccccgtctaaaacccctgaactggtcaag
acttctcctgctccaacagaggtcaaactcccagacacaaacagtaaatccccttcctta
tcccaggacctacctacacccccgtcggtaactaccacccttcacactactaccccccaa
ccctcaactagtcccattgcagacatggacgctccagccccagccgctgctccagcccca
tctgcccctgaagtgcccgcttaccctgcacccctgcctgaaccccgccccactcctgca
gctgaggagcatccctcacctgccaaggaggagcgggaggaagtgaaggagaaagaagag
gaggtggcggaggctaggcaggaggtgactacatcatccaaacctgagccttcccttgct
ccagtgaccacccctagcagcagcagcactaacggtatctctgccacccagccaccccca
gccaaggaggaagagccagcagccctgtccatcaacatgcccaccccccaggcagcagaa
ccccccctggagtctcccatcgcccagccagaggagctcagactgcccaatggcctgccg
ctccccagcccccaggaccctgagaagatgtctgcggagtcgtcggagtgtgacgtcagt
cccattgctgagcctgaggtggcccagttacagagcgaggcacccatgcctaaaccgacg
cccgcccccgttgtccaggcgacgccagcccccgttgtccaggcgacgccagcccccgtt
gtccaggcgacgcccgcccccgttgcccaggcgacgcccgccctagctgagactgctact
actacagttgtaactgctccccgtgtggaagacgagatggactccccaccaccccagagc
accaccccagccggggagagttctatgcaagctgctgtttctgtgccaaagaaaaagagg
aagatgaaggatctgaacaagaaggaggctgttggagacctcctggatgcctttaaggag
gagcaggtagtggggagccctcctgagccagagcaggccacacccacttctgcctctgac
gctaaggagccccgcccagccgccacccctgcagttgaagaggtggatgagacgtgggag
gagaaggaggacaaactggatgcagagaatatcgaacccaagcccgaggatctgaagtac
cagtacaaagaggaactatgtaggcctatagacccagaggagaagaagaggtatgaccgg
gacttcctgctgggcttccagttcatcagtgccgccatgtccaagcctgagggcctgcct
cagatcagtgacgtggtgctggacaaggcgaataaggcccctctccgccagctggacccc
agccgtttgccagggatgaacatgggccccgacttcacaccctcgtttgccaacctgggc
aggcctggaatgggaggaggaggtggtggtggaggtggccacagaggaggaccaccctct
ggtatgggtggtggaggaccacgtcgctcccagcagggccagcgtaaggagcccaggagg
atcatcaacatctcttcgtctctgacggaagacgtgaagctcaacaaggctgagaaggcc
tggaagcccgctgtcaagaaggctgccagtgggcaagctgctcctgaggaggagagtgac
gactcggaacaggccaagacccaggagctgttcaagagggtccgtagtatcctgaataag
ctgacccctcagatgtttcaacagctgatgaagcaggtcacagagctgaccatcgataca
gaggagagactgaagggagtgatagatctgatctttgagaaggccatctctgaacccaac
ttctccgtggcctacgccaacatgtgccgctgccttattgggctcaaagtccccaccaca
gacaagccgggagtcactgtgaatttccgcaagctgcttctgaaccgctgtcagaaggag
tttgagaaggacaaggacgatgatgtcatctttgagaagaagcagaaagagctggacgct
gcagccacggaggagaaggatcgcctgaaggcagagctggaggaggccaaagacaaggcg
cggcggcggtcgctaggcaacatcaagttcattggtgagctgttcaagctgaagatgctg
acggaggccatcatgcacgactgcatcgtcaagctgctgaagaaccacgatgaggagtca
ctagagtgcctctgtagactcttgtcaactatagggaaggacctggactttgaaaaggcg
aagcctcgtatggaccagtactttgcccagatggacaagatcatcaaggagaagaagaca
tcgtccagaatccgcttcatgctgcaggacgtactggacctcaggaggaacacgtgggtc
cctaggagaggagagcagggccccaagaccatagaccagatccacaaggatgctgagctg
gaggagcacagggaggttctcaaggtgcagcagcaactcctcaaccagaacacccgagga
ggaggtggaggacgtggtggtggaggaagagatcagggaagccgcgggggccaacacccc
cagacgggccaaaggagtcagccccaggacgagggctggaacacagttcccatctccacc
aagagcagacccatcgacaccagccgactcagcaagatcactaagcccggggctttggac
ttcaacaaccagctgctggctccccagctcgggggtaagggcatgtggggcagctggggc
aagggcagcagtggaggcaccaccggagccaaacccgctggtgaagccaccccagagtca
ggaggccgcccagccaccagcaccctcaacaggttctcagcattgcagccacagcagccc
tcctcctcagggccctcacatgactcggacagaagagttcctcagaggaacagctcgagc
cgggaccgtggcagcgacagattcgagcgacatgaccgtggcagcaacgaccgcttcgac
aggcgggacgaccggcgagacgaccgggacaggaaccggcccccggtcaccaagcggagc
tttagcagggagacggaggagcacagcagagagagggagcaccgcggccctgctgatcct
gtacgccgcgtagccagcatgaccgacgaccggggcagcagagaccggggcagcagagac
cggggcagcagagaccgggccaggagcaaagacaatgtgaagagggaagctgctctgacc
ccccctcctgcccagaacaaacctgccttgagtgaagaaatgctgggaaagaagtccaca
gctatcatagaggagtacctacacatcaacgacatgaaggaggcgctgcagtgtgtagtg
gagatgaacagcaccccgctgctctttgtgtttgtacggagcggtctagagtccactctg
gagcgcagccccatcgccagagaacgcatgggcctgctgctgcaccagctgtacaaggca
ggcaccctgcccaaagagcagtactacagagggcttcaagagatactggaggtggcggag
gacatggccatagacgtcccccacatctggctctacctggctgagctcatcacccctatg
cttcacgaaggaggcatccccatgggacagctcttcaaggagatatccaagcccctggtt
cctcaggggacggctggagttctgctggtacagatcctcaccttactctgcaaaggaatg
agccataaaaaggcaggcgccatgtggagggaggcgggacttagctggaaagactttctg
cctgaggacgaggacgtcaacaagtttgtgacagaaaagaacgtggagttcaccctggga
ggaggagaagatgatgagacagagaagagcagtaagaaggagctgagctcagaggagctg
accaaacagctggacagactcatacaggacaaggctgacaaccagaggatctatgattgg
gtggaggctaacctggacgagacacagatgtcctccaacatgtttgtcagagcagtcatg
acatccatctgccagtcggccatcatctgtgagagcccttacaagttggatgcgaaggtg
atcactcggagtgccaagctgctccacaagtacctgaaggatgagcagaaggagctgcag
gctctctacgccttgcaggccctcatggtggagatggagcagcctgccaacctgctgcgg
atgttctttgacacgctgtacgatgaggatgtgatcaaagaggaggccttctacaagtgg
gagtccagcaaggaccccgctgagatgcagggcaagggtgtggccctgaagtccgtcacc
gccttcttcacctggctccgtgaggccgaggacgaggagtctgacaacaacagctag
DBGET
integrated database retrieval system
