Salmo trutta (river trout): 115163632
Help
Entry
115163632 CDS
T08542
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00061
Fatty acid biosynthesis
stru00071
Fatty acid degradation
stru01100
Metabolic pathways
stru01212
Fatty acid metabolism
stru03320
PPAR signaling pathway
stru04146
Peroxisome
stru04216
Ferroptosis
stru04920
Adipocytokine signaling pathway
Module
stru_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
115163632
00071 Fatty acid degradation
115163632
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115163632
09143 Cell growth and death
04216 Ferroptosis
115163632
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115163632
03320 PPAR signaling pathway
115163632
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
stru01004
]
115163632
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115163632
Enzymes [BR:
stru01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
115163632
Lipid biosynthesis proteins [BR:
stru01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115163632
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of breast milk
115163632
Exosomal proteins of breast cancer cells
115163632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
KANSL3_1st
Motif
Other DBs
NCBI-GeneID:
115163632
NCBI-ProteinID:
XP_029571532
Ensembl:
ENSSTUG00000016868
UniProt:
A0A673Z0J0
LinkDB
All DBs
Position
26:complement(30082033..30129964)
Genome browser
AA seq
717 aa
AA seq
DB search
MKLKEDLNPVLLLLFQVTVWLYSVLAFLPSYLFSSVSESDAGLGSEQDRAQRLKAQSVTG
RPAGPYRAMGATKRLVSSLHPGLDTLDKVFEDASRRFPDRDCLGTREVVMEEDERQSNGK
VFKKVILGQYRWRSYAETHKAAARFGSGLAALGQRAHNNIAIFCETRAEWVIAAHACFMQ
NFPLVTLYSTLGGPAITHGLNETEVSHIITSRELLETRLKFILLEVPRLQHIIVVDDTPT
KWPGYPRGISVHNMATVQELGTKPENVSRGRKQPMPSDIAVIMYTSGSTGVPKGVMISHS
NIIAGITGMAERIPNLGENDTYIGYLPLAHVLELSAELVCVAHGCRIGYSSPQTLADQST
KIKKGSKGDTSVLQPTLMAAVPEIMDRIYKNVMTKVEEMSSAQRTLFTLAYNYKLEQLSQ
GRSTPLCDNLVFKKVRSLLGGKTRVLLSGGAPLSAATQRFMNVCFCCPVGQGYGLTETCG
AGTISEMWDYSTGRVGGPLICSEIKLKDWVEGGYHSTDTPNPQGEILIGGPNVTMGYYKN
EAKNQDFFVDDNGQRWFCTGDIGEVHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAMLKN
CPLIDNICAYANSEEMYVIGFVVPNQKHLLSLAEQYCIRGSWEELCNNAAMEGVVLQVIT
EAALSAQLERFEIPRKIRLSPDPWTPETGLVTDAFKLKRQQLKSKYQDDIERMYGGK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaagaggatctgaacccagtgctgctgctactcttccaggtgacggtgtgg
ctgtactctgtcctagccttcctcccctcctacctcttcagctctgtgtcagaatcagac
gcaggcctcggctcagaacaggaccgggctcagagactcaaggcccagtctgtgacgggt
cgccccgcggggccctacagggccatgggcgccaccaagaggctggtgtcgtccctgcac
cccgggctagacacactggataaggtgtttgaggatgcatccagaaggttccctgacaga
gactgcctgggcaccagagaggtggtcatggaggaggatgagagacagagcaacggaaag
gtcttcaagaaggtgatcctggggcagtaccgctggcggtcctatgctgagacccacaag
gcagcagcacgctttggcagtggtcttgcagcgctgggccagagggcccacaacaacatt
gccatcttctgtgagaccagggccgagtgggtaatagccgcacatgcgtgcttcatgcaa
aacttccccttggtcactctgtactctaccctggggggtccggccataactcacggtctg
aacgagacagaggtcagtcacatcataaccagcagagagctactggagaccagactcaag
ttcatcctgctggaggtgcccaggctgcagcacatcattgtggtggatgacacacccacc
aagtggcctggttacccacgaggcatcagtgtccacaacatggccaccgttcaggagctg
gggaccaagcctgagaatgtgtctcgtgggcgtaaacagcccatgccctctgacatcgct
gtcatcatgtacaccagcggctccactggcgtacccaagggcgtcatgatctcccatagc
aacatcattgctggcatcactggcatggcagaaaggatacccaacctgggtgagaatgac
acctacatcgggtaccttcccctggcccatgtgttggagctgagtgcagagctggtgtgt
gtggctcacggctgcaggatcggctactcctccccccagacgctagcggaccagtcaaca
aagattaaaaaaggcagtaaaggagacaccagtgttctgcagcctactctaatggcagct
gtaccggagataatggatcgtatctataagaatgtgatgaccaaggtggaggagatgagc
agtgctcagaggactctgttcactctggcctacaactacaagctggagcagctctcccag
ggacgcagcacgccactgtgtgacaacctggtgtttaagaaggttcggtccctcctgggg
gggaagaccagggtgctgctgtcgggcggggcgcccctctctgcagccacccagcgcttt
atgaacgtgtgcttctgttgccccgtgggccagggctacggcctcactgagacctgcgga
gctggcaccatcagcgagatgtgggactacagcacagggcgagttggaggacctctcatt
tgttctgaaattaagctcaaggattgggtggagggtggctaccacagcacagacacgccc
aacccacaaggtgagatcctgattggcgggcccaacgttaccatgggttactacaagaat
gaggccaagaaccaggacttctttgtggacgacaacggccagcgctggttctgtacggga
gacataggagaggtccatcctgatggatgcctcaagatcattgatcgtaagaaggacctg
gttaagctccaggcaggagagtatgtgtctctggggaaggtggaggccatgctgaagaac
tgcccccttatagacaacatctgtgcctacgccaacagtgaagagatgtacgtgattggc
tttgtggtgcccaatcagaagcatctgctgtcgctagcggagcagtattgtatccggggc
tcgtgggaggagctgtgtaacaacgctgccatggagggggtggtcctgcaggtcatcact
gaggctgccctatcagcccagctggagcggtttgagatcccccgtaagatccgtctgagc
cccgacccctggacccccgagacgggcctggtgaccgacgccttcaagctcaaacgccag
cagctgaagagtaagtaccaggatgacatcgagagaatgtatggcgggaagtag
DBGET
integrated database retrieval system
