KEGG   Salmo trutta (river trout): 115163647
Entry
115163647         CDS       T08542                                 
Name
(RefSeq) coatomer subunit beta'-like isoform X1
  KO
K17302  coatomer subunit beta'
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:stru04131]
    115163647
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115163647
Membrane trafficking [BR:stru04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    115163647
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   115163647
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SPT8 PEP5_VPS11_N Beta-prop_HPS5 Beta-prop_LRRK2 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_Vps41
Other DBs
NCBI-GeneID: 115163647
NCBI-ProteinID: XP_029571551
Ensembl: ENSSTUG00000018264
LinkDB
Position
26:31316946..31337457
AA seq 1506 aa
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMVASLYNGSVCVWNHETQTLVKTFEVCDLPV
RVAKFVARKHWVIAGADDMQIRVFNYNTLERAHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWDRKWVCGQVFEGHTHYVMQIVINPKDNNQFASASLDRAIKVWQLGSSAPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHTQNVSCVSFHPE
LPIILTGSEDGTVRVWHSSTYRLENTLNYGMERVWCVCGQRGANSVALGYDEGSIIIKLG
REEPAMSMDSNGKIMWAKHSEVQQANLKAMGEADIQDGERLSLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWGHDSSEYATRESTSMVKIFKNFKE
NKSFKPDFGAEGIHGGFLLGVRSVSGLAFYDWENTELVRRIEIQPKHVFWSESGELVCIA
TEESFFVLRYLAEKVATAQETKEGVTEDGIEDAFEVLGEIQEVVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVTYSLLVSVLEYQTAVMR
RDFGMADRVLPTIPKEMRTRVAHFLEKQGFIQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELATTKCQFVLAQECLHHAQDHGGLLLLATASGNASMVGKLAEGAE
RDGKTNVAFLTYFLQGKLDKCLELLIKTNRLPEAAFLARTYLPSHVSRVVKLWKESLGKV
NQKAADALADPTDYSNLFPGLQEAFLAEDYLKETNVRLRPAAEYPLITSNENRNVLGESA
DYVPKVVPAEPEVAGSMDETPVLEAVVETPVMAAVVEAAAPEAPVVEESIVMEEVEPVAA
AVVEFTPAVEESIPVTVVEPTMAAVEESIELAEEEPIIVEVEAPKPKEATSVEDTITKIE
VLVTIENDTEAPLLVPEVAQSTPEEEVIATPEEPVVEGPATMKSIATAAPVTESVIELIV
TEAPVAEEAPVPIATEPEPVTIEAEVEAEAPFAAAVLEVIATEPMVTEEVTEQAPVTIEV
AVAAEAPITEAVAEPIAASEKAPVIVEENEPTPAPLIDLAPALDLAPAIDLAPVPLIDLA
PAIDLAPAIDLAPAPLIDLAPAPLIDLAPAIDLAPAPLIDLSPAPLIDLAPAIDLVPAPL
IDLAPAPLIDLAPALDLAPAIDLSPAPLIDLAPAIDLAPAIDLAPAPLIDLAPAIDLAPA
PLIDLAPAIDLAPAIDLAPVPLIDLAPAIDLAPAIDLAPAIDPATNPAVEDEAAAAPAVE
PLPALTQVVPPGAEPAPAAPLAALLDGKGVDEAAPLAALLDGKGLDEAAPLAALLEGKGV
DEAAPLVALLEGKGVDEAAPLAALLEGKGVDEAAPLVALLEGKGVEEAAPLVALLEGKGV
EEAAPLVALLEGKGVEEAAPVAVATASMDLLDLNDEGLDDLDLDMFDLDDDIDTTDVNLD
DDFLDD
NT seq 4521 nt   +upstreamnt  +downstreamnt
atgcctctccggttggacatcaagcggaagctgaccgctcggtcggaccgtgtgaagagt
gtggacctgcacccaactgaaccatggatggttgccagcctgtataatggcagtgtctgt
gtctggaaccatgagacacagaccctggtgaagacattcgaggtgtgtgacctgcctgtg
agagtggctaagtttgtggcgaggaagcactgggtcattgctggagcagatgacatgcag
atccgtgtgtttaactacaacactctggagagagctcacatgtttgaggcccactctgac
tacatccgctgcatcgcagtccacccaacacaaccttacatccttaccagcagtgatgac
atgctgatcaagctttgggactgggacaggaagtgggtgtgtggtcaggtgtttgagggc
cacacccactatgtcatgcagatcgtcatcaaccctaaagacaacaaccagttcgccagc
gcctccctggacagggccattaaggtgtggcagctgggatcttccgcccctaacttcact
ctggagggccatgagaaaggagtcaactgtatcgactactacagcggaggggacaagccc
tatcttatatcaggagctgacgaccgcctggtcaagatctgggactaccagaataagacg
tgtgtgcagactctagagggccatacccagaatgtgtcctgtgtcagctttcaccctgag
ctgccaatcatcctcacaggctccgaggacggcacagtgagagtctggcattccagcacg
taccgcctggaaaacacactgaactatgggatggaacgtgtgtggtgtgtgtgtggccag
cgaggcgccaacagtgtggcgctgggatatgatgaaggcagcatcatcatcaagttgggc
cgtgaggaaccagccatgtctatggactctaacggtaagatcatgtgggccaagcactct
gaggtgcagcaggccaacctgaaggccatgggagaggctgatatacaggacggagagagg
ctgtccctggccgtcaaagacatgggcagctgtgaaatctatccccagaccatccagcac
aaccccaacggcaggtttgtggtggtgtgtggggatggagagtacatcatctacactgca
atggccctgaggaacaagagcttcggttcagcacaggagtttgtctggggccacgactcc
tcagagtatgctactcgggagagcaccagtatggtcaaaatcttcaagaacttcaaggaa
aataagtcttttaaaccagactttggggcagaaggtatccatggtgggttcttgctgggc
gtgaggtcagtgagtggtctggccttctacgattgggagaacacagaactggtccgccgc
attgagatccagcctaaacacgtcttctggtcagagtctggggagctggtgtgtatcgcc
acggaggagtctttctttgtgctgcgctacctggctgagaaagtggcaacagcacaggag
accaaggagggagtcaccgaggatgggatagaggacgccttcgaggtgttgggtgagatt
caggaggtggtgaagacaggtctgtgggtgggagactgtttcatctacaccagctcagtc
aacagactcaattactacgtaggaggagagattgtcaccatcgcccacctggacagaact
atgtacctgttgggctacatccctaaggatgaccgtctgtatctgggtgataaggagctg
aacatcgttacttactctctgctggtgtcggtgctggagtaccagactgctgtaatgagg
agggactttgggatggccgacagggtcctacccaccatccctaaagagatgaggaccagg
gtcgcccactttttagagaaacagggtttcattcagcaggccctggctgtgtccacagac
ccagaacacaggtttgagttggctctgcagctaggagaactgaagatcgcctaccagctg
gctgtggaggcagagtcggagcagaagtggaagcagttggcagagctggccaccactaag
tgccagtttgtcctggcccaggagtgtctgcaccatgcccaggaccatggggggctactg
ctgctggccacagcctcgggtaacgccagcatggtgggcaagctggcagagggggcagag
agagacggcaagaccaacgtggctttcctcacctatttcctccaggggaaactggacaaa
tgtctggagctcctcattaaaaccaaccggctgccagaggctgcattcctggcccgaaca
tacctgcccagccatgtgtctagagtggtgaagctgtggaaggagagcctggggaaggtg
aaccagaaggcagctgatgcgttggccgaccctacagactacagcaacctgttccccggc
ctacaggaggccttcctggccgaagactacctcaaggagaccaacgtcaggctgagaccc
gccgcagagtaccctctcatcacctccaatgagaataggaatgtcctgggggaatctgca
gactatgtgccaaaagtagtgcctgctgaaccagaggttgctgggagcatggatgaaacc
cctgtattggaagcagtggtagaaacccctgtaatggcagcagtggtggaggctgcagct
ccagaagctccagtagtggaagagtccattgtcatggaagaggtagaacctgttgcagct
gcagtagtggagtttaccccagcagtagaagaatctatcccagtgacagtagtggaacca
actatggctgcagtggaagaatccattgagctggcagaggaggaacccattattgttgaa
gtggaagctcccaagccaaaggaggcaacatcagtggaagataccatcactaagatagag
gttcttgtcaccatagaaaatgacacagaagcacccctcttggtgccagaggtagcacag
tccaccccagaggaagaagtcatagcaacaccagaggagcctgttgtggaaggacctgca
acaatgaagtccatagcaacagctgcacctgttacagagtcggtcatagaactcattgta
acagaagcaccagttgccgaggaagcgccagtgcctatagcaacagaaccagaacctgtt
accatagaagcggaggtggaagctgaagcaccttttgccgcagcagtactagaagtcata
gcaacagaacccatggttacagaggaagtaacagaacaagcacctgttaccatagaagtg
gcagtggcagcagaagcacccattactgaggcagtagcagaacccatagcagcatctgaa
aaagccccagtcattgtagaagagaatgaacctaccccagcaccactcatagacctagcc
ccagccttagacctagccccagccatagacctagccccagtaccactcatagacctagcc
ccagccatagacctagccccagccatagacctagccccagcaccactcatagacctagcc
ccagcaccactcatagacctagccccagccatagacctagccccagcaccactcatagac
ctatccccagcaccactcatagacctagccccagccatagacctagtcccagcaccactc
atagacctagccccagcaccactcatagacctagccccagccttagacctagccccagcc
atagacctatccccagcaccactcatagacctagccccagccatagacctagccccagcc
atagacctagccccagcaccactcatagacctagccccagccatagacctagccccagca
ccactcatagacctagccccagccatagacctagccccagccatagacctagccccagta
ccactcatagacctagccccagccatagacctagccccagccatagacctagccccagcc
atagatccagctacaaacccagctgtagaggacgaggctgcagcagccccagcagtagag
cccctaccagccctcacccaggtggttccaccaggcgcagagccagcccctgcagcccct
ctagctgccctcttagacggtaaaggtgtggatgaggcagcccctctagctgccctctta
gacggtaaaggtttggatgaggcagcccctctagctgccctcttagagggtaaaggtgtg
gatgaggcagcccctctagttgccctcttagagggtaaaggtgtggatgaggcagcccct
ctagctgccctcttagagggtaaaggtgtggatgaggcagcccctctagttgccctctta
gagggtaaaggtgtggaggaggcagcccctctagttgccctcttagagggaaaaggtgtg
gaggaggcagcccctctagttgccctcttagagggaaaaggtgtggaggaggcagcgcct
gtagcagtagcaacagcatccatggacctgctggacctgaatgatgagggccttgacgac
ctggacctggacatgtttgatctggatgatgacatcgacaccacagacgtcaatctggac
gatgacttcttagacgactga

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