Salmo trutta (river trout): 115163701
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Entry
115163701 CDS
T08542
Name
(RefSeq) platelet-derived growth factor D isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04020
Calcium signaling pathway
stru04510
Focal adhesion
stru04518
Integrin signaling
stru04540
Gap junction
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115163701
04020 Calcium signaling pathway
115163701
09133 Signaling molecules and interaction
04518 Integrin signaling
115163701
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115163701
04540 Gap junction
115163701
09142 Cell motility
04810 Regulation of actin cytoskeleton
115163701
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
stru04052
]
115163701
Cytokines and neuropeptides [BR:
stru04052
]
Cytokines
Growth factors (RTK binding)
115163701
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUB
PDGF
AcfD_helical
Motif
Other DBs
NCBI-GeneID:
115163701
NCBI-ProteinID:
XP_029571664
LinkDB
All DBs
Position
26:35432664..35494041
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AA seq
391 aa
AA seq
DB search
MNGSGRVALALLLALLGGFTGGTQGQVVSAKVMRSSNVRQHDLFRKEEVVTVTATGGVIQ
SPRFPNAYPRNLQLSWKLLSPHNTRITLEFDSHFALEEPENEVCRYDFVEVEDISETSTI
VWGRWCGQRVPPRLTSKTNTLKVSFKSDDYFVAKPGFKLHFSLQEDLVCHDSPATRRGFM
SLLTYSLKDDSLPTASKTNWEAVTLMEDSLSVLAPAVTAVPLTAAALDQTIAAFNTVEQV
LRHLNPDSWRQDLDSLYRETAMYRPRAYQHSRQNKIDLDRLYDDVKRYSCTPRNYSVNLR
EELRATNAVFFPRCLLVQRCGGNCACGTDNWNSCTCSPAKTSDKLHEVLKYAPEVGGYSR
RQTVRVSWALEEVHLTHHERCDCVCPSRPPR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaacggctctgggcgcgtggcactggcgctgttgctcgcgctgctggggggctttacc
gggggcacacaaggccaggtagtgtccgccaaggtgatgcggtcttctaacgtgaggcaa
catgacttgttccggaaagaagaggtcgtcacggtaacggcaacgggcggagttatccag
agcccccgctttcctaacgcctaccccaggaacctgcagttgtcatggaaactactgtcg
ccccacaacacccgcatcaccctggagtttgactcccactttgcactggaggaaccagag
aacgaagtctgcagatatgactttgtggaggtggaggacatctcagagaccagtactatt
gtctgggggagatggtgtggtcagagagtcccccctcgtcttacctccaaaaccaacacc
ctcaaagtctccttcaagtcagacgactacttcgtggccaagcctggcttcaaactccac
ttctctctacaggaggacctagtctgccacgactctccagctaccagacgtggtttcatg
tccctgttgacctactctctaaaggatgattctcttcctacagcgtcgaagactaactgg
gaggctgtgaccctgatggaggacagtctgtcagtgttggctccagcggtgactgctgtt
cctctgacagcagcggcgttggaccagaccatagcagccttcaacacagtggagcaggtc
ctccgtcacctcaaccctgacagctggagacaggacctggacagcttgtacagagagaca
gccatgtacagaccccgggcctaccagcacagcagacagaacaagattgacctggaccgt
ctgtatgatgacgtgaagcgctacagctgtacacctcggaactactctgtcaacctgagg
gaggagctgagggccaccaacgccgtgttcttcccacgatgcctactggtgcagcgctgt
ggggggaactgtgcctgtgggacggacaactggaacagctgtacctgcagtccggccaag
accagtgacaaactacacgaggtgttgaagtatgctcctgaggtgggaggttattcacgg
cgtcagacagttcgggtcagctgggccctagaggaggtccacttgacgcaccacgagcgc
tgtgactgtgtttgtccctccagaccaccccgctga
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