Salmo trutta (river trout): 115163782
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Entry
115163782 CDS
T08542
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115163782 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115163782 (dhx36)
03012 Translation factors [BR:
stru03012
]
115163782 (dhx36)
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115163782 (dhx36)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115163782 (dhx36)
Translation factors [BR:
stru03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115163782 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
NB-ARC
ATPase
AAA_16
NPHP3_N
DUF7428
Motif
Other DBs
NCBI-GeneID:
115163782
NCBI-ProteinID:
XP_029571806
Ensembl:
ENSSTUG00000008219
UniProt:
A0A673X9X6
LinkDB
All DBs
Position
26:40717461..40772695
Genome browser
AA seq
1064 aa
AA seq
DB search
MSYGGYGGRGGRRGGRRGGRGFGRDGSRERWDRLAGSSGGGHPRSTESESREDRGERGGR
GGGPNRPPPHLKGREIGLWYAKWGGLKRKENERKSRAVVQMDESREQHITNLLNTVQRGP
TCPGPAREAHPSTSEHWRSAPSAPDRGGHCYFDGDEPSQDVLKIDLKQEKKKEDEERPVQ
NTTLTSQRYFPQDVLKAEPKEEREEKERRGKDKDLEYLFQEVVRENALDQQLKRDLERKK
ADSKYLDMLKFREKLPSFGKKEELVELIRSSQVLVVSGETGCGKTTQVTQFILDDYIERG
MGSVCRVVCTQPRRISAISVAERVAAERAESVGDGNSCGYQIRLQSRLPRKQGSVLYCTT
GIILQWLRSSPLLSTISHLVLDEIHERNLHSDVLLIIVKDLLRVRQDLKVILMSATLNAE
KFSKYFNNCPMIHIPGMTFPVQEFLLEDVLEMIRYRPQRKEQRPRWKRGFMQGQNSRPEK
DQKEAEYKESWPCYARTLRDKYSDRTIDVLEMMDDDDKIDLELIVQLIRHIVLSQEEGAI
LVFLPGWDNISGLNDLLMAQQMFKSDRFVIIPLHSLMPTVTQTSVFKRPPPGVRKIVIAT
NIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMTAEWVSLANAKQRRGRAGRVCPGKC
YHLYNGLRASLLDAYQLPEIMRTPLEELCLQIKILKLGPIAEFLRKALDPPTEEAVTLAI
THLMDLNALDRSEALTPLGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPF
FIPMGKEKMADFRRRTLSRDSKSDHLTIIYAFTGWEEAKRRGYKFEREFCWDNFLSANTL
QMLHNMKGQFAEHLLGAGFISTKNHKDPDSNINSENEKLIKAVIVAGLYPKVAMIKPSGS
KKRPVRVYTKTDGKVCIHPKSVNAEETQFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLF
FGGDVTIQMDQDQETIAVDDWIVFQSPARIAHLVKNLKKELDSLLEEKIRSPAPVDWSNR
QSKDCAVITAIIDLITTQERPNINARNTAPRGRHQYYNDDGDEY
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggaggttatgggggcagaggcggtcgacgaggtggccgaagaggaggtcga
ggattcggacgggatgggagccgggagaggtgggatcgcctagctgggtcgagtggtggt
ggacacccgcggagcaccgaatcggagtcgagggaggaccggggagaacgaggagggaga
ggtgggggaccaaaccgtccacccccacatctaaagggccgggagatcggactgtggtac
gccaaatggggaggcttgaagaggaaagaaaatgagagaaaatcgcgggccgtggttcag
atggatgagtccagggaacagcatatcactaatctgctgaacactgtccagagaggaccg
acatgcccgggcccagccagggaggcccacccctccacatctgagcactggcgttcagcc
ccgtcagcaccggacagaggcggccactgttactttgatggtgatgagccctctcaggat
gtcctgaaaattgatctcaaacaagagaagaagaaggaggatgaggagaggccagtacag
aacactacactcacatcacaacgttacttcccacaggatgtccttaaagctgaacccaaa
gaagagagggaggagaaggagaggagagggaaggataaagacctggagtacttgtttcag
gaggtggtcagggagaatgccctggaccagcagttaaagagagatctagagaggaagaag
gcggactctaaatacctagacatgctgaaattcagggaaaagcttccatcctttggaaag
aaagaggagttggtggagttgatcaggtccagccaggtgctggtggtcagtggagagaca
gggtgcggtaagaccacccaggtgacccagtttatcctggatgactacatagagaggggc
atgggttcagtctgcagggtggtctgcacccagccacgtcgcatcagtgccatatctgta
gcggagcgggtggctgcggagagggccgagagtgtgggggacgggaattcatgtggttat
cagatccgcctgcagagtcggttaccacggaaacagggctcggtgctgtattgtacaacg
ggtattattctacagtggctccgctcatcccctctgttgtccaccattagccacctggtt
ttggatgagattcatgagaggaaccttcactctgatgttctgctcatcatcgttaaagac
ctgctccgagtccgacaggacctcaaggtcatcctcatgagtgccacgctcaacgctgag
aagttctccaaatacttcaataactgtcctatgatccacatcccggggatgaccttccca
gtgcaagagttcctactggaggatgtattggagatgattaggtaccgtccccagaggaag
gagcagaggcccaggtggaagagaggtttcatgcagggtcagaactccagaccggagaag
gaccagaaagaggccgagtacaaggagagctggccctgctacgcccgcacattacgagac
aagtactctgacagaaccatagatgtgttggagatgatggacgatgatgataagattgac
cttgagctcatcgtgcagctgatcagacatatcgtgctaagccaggaagaaggagccatc
ttggtgttcctgccaggttgggacaacatcagtgggctcaacgacctactcatggctcag
cagatgttcaaatcagatcggtttgtgatcattcctctgcactccctgatgcctactgtc
acccagacctcggtgttcaaaaggccccctccaggagtcaggaagattgtcattgccacc
aatatcgctgagaccagtattaccatagatgatgtggtgtttgtgatagatgggggaaag
attaaggagactcactttgacactcagaacaacatcagcactatgactgcagagtgggtc
agcctggccaatgccaaacagagaagaggacgcgccggcagggtgtgtccagggaagtgt
tatcacctgtataatggcctgagggccagtcttctggatgcctaccagctacctgagatc
atgcgcacgccactggaggaactgtgtctgcagatcaagatcctcaagctgggtccaata
gcagagttcctgaggaaagctctggaccctcccacagaggaggctgtcactctggccatc
acacacctgatggaccttaatgctctggaccgctcagaggctctgaccccgttagggttc
cacctggccaggctgcctgtagagcctcacatcgggaagctgattctgtttggagctctg
ctgggctgtctggaccctgtcctcactatcgccgcctctctcagcttcaaggaccccttc
ttcataccaatgggtaaggagaagatggcagactttaggagaagaactctgtccagagac
tcaaagagtgaccacctcaccatcatctatgccttcacaggctgggaggaagctaagcga
cgtggctacaagtttgaacgagagttctgctgggacaacttcttgtcagccaatacactc
cagatgctgcacaacatgaagggtcagtttgctgagcacctgcttggggctggcttcatc
agcaccaagaaccacaaagaccctgactctaacatcaactcagagaatgagaagctgatc
aaggcagtgatagtggcaggtctctaccccaaagtggccatgatcaaacccagcggcagc
aagaaaagaccggtgagggtgtatactaaaactgacgggaaggtgtgtattcaccccaag
tcagtgaatgctgaggagacccagtttaactacacatggctcatctatcacctcaagatg
aggaccagcagtatcttcctgtacgactgtacggaggtgtctccgttctccctgctgttc
tttggaggtgacgtcaccatccagatggatcaggaccaggagaccatcgctgtggatgac
tggatcgtcttccagtcccccgcacgcatcgctcacctcgtcaagaatctgaagaaggag
ctggactctctattggaagagaagatccgaagccccgcccctgtggactggagcaaccgc
caatccaaagactgtgctgtcatcacagccatcatagacctcatcaccacccaggagagg
cccaacattaacgcgaggaacactgcccctagaggacgtcaccagtattacaacgatgat
ggtgacgagtactag
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integrated database retrieval system
