Salmo trutta (river trout): 115163822
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Entry
115163822 CDS
T08542
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
stru
Salmo trutta (river trout)
Pathway
stru04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115163822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115163822
03036 Chromosome and associated proteins [BR:
stru03036
]
115163822
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
115163822
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
115163822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADD_ATRX
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
115163822
NCBI-ProteinID:
XP_029571884
LinkDB
All DBs
Position
3:921284..974439
Genome browser
AA seq
1586 aa
AA seq
DB search
MSKASAESTDQVMEEEVGQLPITDQMEEEAGSSTETETPSSSHTKRKPAVAAKQVGGNES
DTSDESGQEDGASDGMLVVQPPAGTDNKEDKSRGAMKLRVDLSRRKTGKMSKASAESTDQ
VMEEEVGQLPITDQKEEEEVDQLPITDQMEEDAGSSTETETPSSSHTKRKPAVAAKQVGG
NESDTSDESGQEDGASDGMLVVRPSAGTDKEDKSRGAMKLRVDLSRRKTDTTLQERIDCT
ACGQQVNHFQRHSVFEHPMLHVLLCKSCYKYYTSDDINKDEDGMDEQCRWCAEGGNLICC
DYCHNAFCKKCILRNLGRKELSMITDEDSKWSCYICSPQPLSDIASNCSNIMTKLESFWR
TGRKKEREEVKRHSKGKGHHHHGKAVVNGKEHSDGSGTLTFSYKTLKVPKELVKRTKKLI
ETTTGLNNTFIHFIQQAEVEQGAAGGGGSGTRHRHLKAFRSVLVDLKKAHAALEKDLESQ
FTSQDQGMQNGDAVSNTDGHDCHDQIDNGREAEEDKMADTEDGEEDGGVSEDTAMEGSPT
PTLQDHSETDIQAKDQTAVKMEEEEDGTEEEGDRDKDILSVGPFVPDELFQMVESLADST
GLTPGNDATELTAASQSENPVASSTRKSRDTQKEKAMPKVKNLILKLTPVPVVTTRTSRS
KSKVKDGGKEKESENGERSEGGGKAKERSKDEGKEVEGGGASEEDSRCSSRTKTTPLRKS
PEGKNKMSSFSQENSDSEGEEKSPSKLKRRTKGSSEKERVNEEEKERKESKASSTVTSDL
SKQNVDSDSDEVPDILVQTAAAERSSDEDVQQDADSNQGNKRVKKCLFKLSKKEEEVGEE
EEEVGEEEEEVGEEEVGEEDKEKADKKPAAKRKLKADNSEPDSDEDAKKKNKSSMASDKK
TSKKKQKVSGGSSNSDSDLEKEMKGLSKLGTGKRRSSRVKKEKEKENKGGDRKRSYELKR
KARGKGAKQQDSSSDDEEEEGGGSGEESGDQQKIKPIVEETVVAGRGTFHQSSGEEGNQD
ASQMADDDDDDPENRIAKKMLLAQIKANYSSGAEESSDEDGEEKEQSKGGEEEEEEEEEE
GADDDDDDEEEGDSGSDVDVKKSGGRRHRLLRHKLTLSEGESGEEKPASKGKKKETKRTR
RKVGSDDSADLDSEESASSSESGVSEEISEEEESESEEESEEGSSRRRTTRSSKKKKKKK
EERSYAQKKKRRRIKVQDSSSDEKSGSGEDGSGKEDGDTPKGQRKKIRKILKDDKLRTET
RDALKEEEERRRRIAEREQLREKLREVLVVEEASAVACPITTKLVLDEDEETKEPMVQVH
RNLVTKLKPHQVDGVQFMWDCCCESVKKTNKNSGSGCILAHCMGLGKTLQVVTLLHTLLL
CEKLDFSTALIVCPLNTVLNWLNEFEKWQYGFKDEESLEVHARTKKINIYITHTXELINQ
GRQKVMEATNALKFLPRESLEDTIGRVWKENPALTEAQVQAMALGRQASVEMELKRREAA
YRDVLNKQQTLMMYVQKVITNRKVREQQMAMANQAQLMSQMNGMLGAGGMSQMELLGLYQ
QLGALQGHPTHPSMGGKNPGPSKGNL
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggcctcagctgaatctacagaccaggtgatggaggaggaagtaggtcaactt
ccaattacagaccagatggaggaggaggctgggagctcaacagagactgagacaccctct
tcttctcacaccaagaggaagcctgctgtcgcagccaagcaagttggaggtaatgagtcg
gacacctcggacgagagtggacaggaagatggcgcctcagatgggatgttggttgtgcag
cctcctgctgggactgacaacaaggaggacaagagcagaggagccatgaagctccgagtg
gacctctcacggagaaagacaggtaaaatgagtaaggcctcagctgaatctacagaccag
gtgatggaggaggaagtaggtcaacttccaattacagaccagaaggaggaggaggaagta
gatcaacttccgattacagaccagatggaggaggatgctgggagctcaacagagactgag
acaccctcttcttctcacaccaagaggaagcctgctgtcgcagccaagcaagttggaggt
aatgagtcggacacctcggacgagagtggacaggaagatggcgcctcagatgggatgttg
gttgtgcggccttctgctgggactgacaaggaggacaagagcagaggagccatgaagctc
cgagtggacctctcacggagaaagacagataccactttgcaggagagaatagactgcacc
gcctgtggacagcaggtcaaccacttccagcgccactcggtgtttgagcaccccatgctc
catgtgctcctctgcaagtcgtgctataagtattacaccagcgatgacatcaataaagac
gaggacggcatggacgaacagtgcaggtggtgtgctgaaggcggcaacctgatctgctgt
gactactgccacaacgccttctgtaagaagtgcatcctgcgtaacctggggcgcaaggag
ctgtccatgatcaccgacgaggacagtaaatggtcctgctatatctgcagccctcagccc
ctctcagacatcgcctccaactgctccaacatcatgaccaaactggagagcttctggcgc
acgggacgcaagaaagagagggaggaggtgaaaaggcacagtaagggtaaaggtcaccac
caccatggtaaagctgtggtgaacggtaaggagcattcagacgggtcagggaccctcacc
ttctcctataagaccctgaaggtccccaaggagctggtgaagaggaccaagaagctgatt
gagacgactacagggctcaacaacaccttcatccatttcatccagcaggctgaggtggaa
cagggagcagcaggaggaggtggaagcgggaccagacacagacaccttaaggccttcagg
tctgttctggttgacctgaagaaggcccacgctgccctagagaaagacttggagtcacag
ttcacttcccaggaccaggggatgcagaacggggatgctgtttccaacaccgatggccat
gactgccacgatcagatagacaatgggcgagaggcagaagaggacaaaatggccgacact
gaggatggggaggaggatgggggtgtgtcagaggacacggcgatggagggaagccccacc
cccacgcttcaggaccactcagagacagacattcaggccaaagaccagacagcggtgaaa
atggaggaggaggaggatggaacggaggaagagggtgaccgggataaagacattttgtcc
gtcgggccatttgtccctgacgagctcttccagatggtcgagagtctagcggactccacg
gggttaacgccaggtaacgacgccacggaactcacagcggctagccaatcagagaacccc
gtcgctagctcaaccaggaagtcacgtgacacccagaaggagaaggccatgcccaaggtt
aagaacctcatcttgaagctgacgcctgttcccgtggttaccacacgcacctctaggtct
aagagcaaggttaaagatggagggaaggagaaggagagtgagaatggagagaggagtgag
ggtggagggaaggcgaaagaaagaagtaaggatgagggtaaggaggtggagggaggtggg
gcctccgaggaggacagccgatgctccagccgcacaaagaccacacccctcaggaagtca
ccggaggggaaaaacaagatgtcttccttctctcaggagaacagcgactcagaaggcgag
gagaagagccccagcaaactgaagaggagaaccaagggcagctccgagaaggaacgggtg
aacgaggaggagaaggagcggaaagagagcaaggcctcctccacggtgacctctgacctt
tctaaacagaacgtggactcagattctgacgaggttccagacatcctggtccagactgca
gcggcagaacgcagctcggacgaggatgtgcagcaggacgccgacagtaaccagggcaac
aagcgagtcaagaagtgcctgttcaaactcagcaagaaagaggaggaggtgggagaggag
gaggaggaggtgggagaggaggaggaggaggtgggagaggaggaggtgggagaggaggac
aaggagaaggcagacaagaagccggcggccaaacgcaaactgaaagccgacaactcagag
cctgactccgatgaagacgcaaagaagaaaaataagtcctccatggcttctgacaaaaag
acatccaagaagaagcagaaggtctcgggcggctcctctaactccgactctgacctggag
aaggagatgaagggactcagcaaactaggcacggggaaacggaggagcagccgcgtaaag
aaagaaaaagagaaggagaacaagggcggggatcggaagcggtcctatgagctgaaacgc
aaagccagaggtaaaggagccaagcagcaagattcatcgtctgatgacgaggaggaggag
ggaggagggtctggagaggagagtggagaccagcagaagattaaacccatcgtggaggag
acggtggtagcagggaggggaaccttccaccagtcctcaggagaagaaggtaaccaggat
gcttctcagatggctgatgatgatgatgatgatccagagaacagaattgccaagaagatg
ctgctggcccagatcaaggccaactactcttcaggagcggaggagagctctgacgaggac
ggagaagagaaggaacagagcaagggaggagaggaggaggaagaggaggaggaggaagag
ggggctgatgatgatgatgatgatgaggaggaaggggactctggctctgacgtggatgtg
aagaagagtggggggcgtcgccaccggctgctccgccacaaactgacgctgagcgaggga
gagtcaggagaggagaaaccagccagcaaagggaagaagaaggagaccaagaggaccaga
cggaaagtgggtagtgatgactcagcagacttggactctgaggagtcagctagcagcagt
gagtcaggcgttagtgaagagatcagtgaggaggaggagtcggagtcagaggaagagtcg
gaggagggcagcagtcgcaggaggaccacgcgctcctccaaaaaaaagaagaagaagaag
gaggagaggagctacgcccagaagaagaaacggcgccgcatcaaggtccaggactcttca
tccgacgagaagagcggttcaggagaggacggctcggggaaggaggatggagacactcct
aaaggacagaggaagaagatcagaaaaatcctgaaggacgacaagctgaggacggaaacg
agggatgccctaaaggaggaagaggagaggaggagacgtatcgctgagagggagcagctc
agggagaaactcagagaggtactcgtggtggaggaggcgtccgccgtggcttgtccaatc
acaaccaagctggtgttggatgaagatgaggagaccaaggagcccatggtgcaggtccac
cgcaatctggtcaccaagctcaaaccacaccaggtcgacggggtccagttcatgtgggac
tgctgttgtgaatcggtgaagaaaaccaacaagaactctggttctggatgtattctggct
cactgtatgggcctgggaaaaacactgcaggtggtgaccctactccacactctactactg
tgtgagaagttagacttctccacggctctgatcgtctgtcctctcaacacggtcctcaac
tggctcaacgagtttgagaagtggcagtacggcttcaaggatgaggagagtttagaggta
cacgcacggacaaaaaaaataaatatatatatcacacacacataggagttgatcaaccag
ggacgtcagaaggtgatggaggccaccaacgctctcaaattcctccccagagaatctcta
gaggacaccatcgggagagtgtggaaggagaacccagccctaacggaggcccaggtccag
gccatggctctggggagacaggccagtgtagagatggaactcaaacgaagagaagctgcc
tacagagacgtcctcaataagcaacagactctgatgatgtatgttcagaaggtgatcacc
aacaggaaggtgagagagcagcagatggccatggccaaccaggcccagctgatgagccag
atgaacggcatgctgggagctggagggatgagccagatggaactcttggggttgtaccaa
cagctgggagcgctacagggtcatcccacccacccctccatgggcggcaagaaccccggc
ccctctaagggcaacctgtaa
DBGET
integrated database retrieval system
