Salmo trutta (river trout): 115163869
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Entry
115163869 CDS
T08542
Name
(RefSeq) nectin-1-like
KO
K06081
poliovirus receptor-related protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03266
Virion - Herpesvirus
stru04514
Cell adhesion molecules
stru04520
Adherens junction
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
115163869
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115163869
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115163869
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115163869
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115163869
04090 CD molecules [BR:
stru04090
]
115163869
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
Nectin family
115163869
CD molecules [BR:
stru04090
]
Proteins
115163869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
I-set
ig
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
115163869
NCBI-ProteinID:
XP_029571942
Ensembl:
ENSSTUG00000006397
UniProt:
A0A673WYJ3
LinkDB
All DBs
Position
26:48098262..48254439
Genome browser
AA seq
497 aa
AA seq
DB search
MLLSVWIVLLAVNVQAGDGQSVQMDSIKSGFVGSQVELRCIFVNSNPPVKISQVTWQKFL
NGTKQNVAIANPSLGVSVLPPFKERVTFKQAAVRHRTPSLEDTTIMFSNLRLSDEAAYIC
EYTTFPAGNRENMVNLTVFARPLTRMTLTTPTIVARPQKRKMTVATCLSANGKPPSVIKW
DTRLKGEATFQETQNANGTVTVRSNYVVVPSRETHKQKLTCIVTYNNERITDSVVLNVQY
EPEVKIDGFDGNWYLDRQDVSLTCNADANPPVTVYQWKVVNGSLPSTVKILNNSLIFKGA
VTYELAGTYVCAATNGIGTRTGLVQVNVTEFPNNPPPGGREIPQEQHNAGAVIGGIVGGV
VLLAAAATLLFVFLRRRQRTFKGDYSTKKQVFGNGYSKAGGLPAHPPIPNNLQYPDDSDD
EKKPAQIAVTGGFEASERDFDGDAEDLKRPYFTVDEGESRDYDERTLAFQYDPESEIADD
MVSQTDGSVISKKEWYV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgagtgtttggattgtcctcctggctgtcaacgtacaagctggagatggacag
agtgtccagatggactccattaagtcaggcttcgtgggctcccaggtggagctacgttgt
atcttcgttaactccaaccccccggtcaagatctctcaggtgacatggcagaagttcctg
aacggcaccaaacagaacgtggccatcgccaacccgtcgctgggcgtctccgtgctcccg
cccttcaaggagagggtgaccttcaagcaggcggcggtccgccaccgcaccccgtctctg
gaggacaccaccatcatgttctccaacctgaggctgtctgatgaggctgcatatatctgc
gagtacaccaccttccctgctgggaaccgagagaacatggtcaacctcaccgtgtttgct
cggcctctgacccgaatgacgttgaccacgcccaccatcgtggcccgcccccagaagcgg
aagatgaccgtggcgacctgcctctcggccaatgggaagcctccgagcgtgatcaagtgg
gacacgaggctgaagggcgaagccacgttccaagagacgcagaatgccaacggcacggtg
accgttaggagtaactatgtggtcgtgccgagcagagagacacacaaacagaaactcacc
tgcatcgtaacctacaacaacgagaggattacagacagtgtcgtgctcaacgtgcaatat
gaaccggaggtgaagatcgacggcttcgatggtaactggtacctggaccgtcaggacgtc
agcctcacctgcaacgctgacgctaaccctcctgttaccgtctaccagtggaaagtggtg
aatggatctcttcccagcactgtgaagattcttaacaactctctgatcttcaagggtgcg
gtgacctatgagctagctgggacgtatgtgtgtgctgccaccaatgggatcgggactcgt
actggtctggtccaggttaatgttactgaattccctaacaacccgccacctgggggccgt
gagatcccgcaggagcagcacaatgcgggtgccgtcatcgggggcatcgtgggcggggtc
gtcctgttagcggcggccgccaccctgctctttgtcttcctgcgccgccgccagcgcacc
ttcaagggcgactacagcaccaagaaacaggtgtttgggaacggctacagcaaggccggg
ggcctgccagcccaccctcccatccccaacaacctgcagtacccagacgactcggatgac
gagaagaagcctgcacagatcgctgtgaccggagggttcgaggcgagcgagcgcgatttt
gacggagacgcggaggacttgaagaggccctatttcacagtggacgaaggagagagcaga
gattacgacgaacggactctcgccttccagtacgaccccgagtcggagatagccgacgat
atggtgtcccaaaccgatggctctgtcatttcaaagaaagagtggtatgtgtag
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