Salmo trutta (river trout): 115164040
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Entry
115164040 CDS
T08542
Name
(RefSeq) whirlin-like
KO
K21879
whirlin
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115164040
Cilium and associated proteins [BR:
stru03037
]
Primary cilia and associated proteins
USH complex and associated proteins
115164040
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GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
115164040
NCBI-ProteinID:
XP_029572030
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Position
27:4629947..4733053
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AA seq
893 aa
AA seq
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MNPHDLSCYASPGACPGKDGFSTTADGTAPQAFIQGEAFGEIRQVTLRRRKSNEGLGFSI
RGGSEHDVGIYVSLVEPGSFAENEGLRVGDQIVTVNDMLFDRLSHMEAVKVLKGCKKLTM
SVCSVGRIPGGFITNHIYTWVDPQGRSVSPPSDLEQEQHSTLGQQDSQRRGHTQERAEKT
ITLNLNDGLSLGLMIRGGAEYGLGIYITGVDPGSAADHAGLKVGGQLLEVNGRSFVAIPH
DEAVRILKTCRHLLVRVRDVGRLPHARTVVDQTKWISSPSPPSPPPVAESTASPATTRPS
SARATPVLGKPVCRGVWPPGSQVSLEEQAFLLLTDPERQTMGYYLQEYQEGHIGLEPLAM
ALFELFNTHAKLSLLSEVRSLVAPQDLELYDGLVLHREREALKAWHGEKGTLHPTSRCVH
TEPLASHSHYNPTTLCSAKHECSHGDSVEHDPGVRTSVLPDITLKEVRSTAESPPSFKPS
LPSGHTQTRNPKERDPSKRPSSSHSQSGLIFTAPTRLHQECHHKSLKAFSSSNHQTSTSP
SSGLHHTCPNPGHQNSPNPGTNHSANPSSGHQTSINSLHHTCQNSLHISTPTSDHHPHQA
CPSSGHHTCPGSLHHNPLWFPSAPPTQESTIKHPIFRSCSHEKPATSPKTASPCLSPCPS
PGLSPCLSPCPSPCPSLTVLKPPPCSPDRPCSPCSPSLSQGGQCVMAGIHRLTAEVRPQP
QQRGATLSQLSDSGQTLSEDSGVDIAEAGGLSKDSSPRPSKNQATQQSQVAQGPAALASK
QQPGSPVPTPTLVHVVKNANTLGIAIEGGANTRLPLPRIVTIQKGGSAHGCGQLKVGQVI
LEVNGVSLRGREHQDAACIIAEAFKSKERDHIDFLVTEFNATLLQGLLQGRIH
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctcatgatctctcttgttatgcatcaccaggagcgtgtcccggcaaggatggt
ttcagcaccactgctgatgggaccgctccccaggctttcatccagggggaggcttttgga
gagatccgccaagtgacactgagacgcagaaagagcaatgagggtttagggttcagcatc
cggggaggctccgagcacgatgtgggaatatatgtgtcgctagtagaacccggatctttc
gctgagaacgagggattgagggtcggtgatcagatagtgactgttaacgacatgctgttt
gacagactctcacacatggaggcagtcaaggtcctgaagggctgtaagaagctgaccatg
tcagtgtgttctgtgggccgtatccctggcggttttatcaccaaccacatctacacctgg
gtggaccctcagggccgcagtgtctcccctccctccgacttggagcaggagcagcacagc
accctgggacagcaggacagccagagacgtggacacacacaggagagggctgagaagaca
atcaccctaaacctgaacgatggtctctctctaggcctgatgatcagaggaggggcagag
tacggcctgggcatatacattactggagtggacccaggctcagccgcagaccacgctgga
ctcaaggtgggcggccagctgctggaggtgaatgggcggagcttcgtggccatcccccat
gatgaggcggtgaggatcctgaagacgtgtcgccacctgctggttagggtgagagacgtt
ggccgcctgccccatgcccgcaccgtggtggaccagaccaaatggatcagcagccctagc
ccccccagcccaccgcccgtggcagagagcaccgccagcccagctactacacggccatct
tcagcgcgggctacacctgtattaggaaagccagtgtgtcgaggtgtgtggcccccaggt
tcacaggtatctctagaggagcaggcctttctgctgctgacagacccagagaggcagacc
atgggttactacctgcaggagtaccaggagggacacatcggtctggaacccctggctatg
gccctgtttgaactcttcaacacccacgccaagttatccttgctgtctgaggtgcgtagc
ctggtggctccccaggacctggagctgtatgatggtctggtgctgcaccgtgagagggag
gctctgaaggcctggcatggagaaaaaggaacgttgcatccaaccagccgctgtgtacac
acagagcccttagccagccacagccactacaaccccaccactctctgctctgccaagcat
gagtgctctcatggtgacagtgtagagcatgatccaggggtacgcactagtgtcctacct
gacattacattgaaagaggtgcggtctacagctgaatctcctccgtccttcaagccatca
cttccctccggccatacccagacgagaaaccccaaggagagggacccttccaagcgcccc
tcatccagtcactcccagtctggcctgatctttactgcccccaccaggctacaccaggaa
tgccaccacaaatccctcaaagccttcagctcctccaaccaccaaacctccacctcccct
agttctggcctccatcacacctgtcccaaccctggccaccaaaacagccccaaccctggc
accaaccacagtgccaatccaagctctggtcatcagacatccataaactctcttcaccac
acctgccaaaactccctccacatctccacccccacctctgaccaccacccccaccaagcc
tgccctagctctggccaccatacctgccccggctcccttcaccacaaccccttgtggttc
ccctctgctcctccaacccaggagtcgaccatcaagcaccccatcttcagatcctgttcc
catgagaagcctgctacctcccctaagactgcctccccttgtctctccccgtgtccctcc
cctggtctctccccatgtctgtccccctgtccctcgccctgtccctctctcactgtcctg
aagccgcccccatgtagcccagacagaccctgctctccttgttctccctccctcagccag
ggaggtcagtgtgtcatggcaggcatacacagactgactgctgaggtcaggccccagccc
cagcagagaggcgccacattgtcccagctgtcagacagtggtcagactctgagtgaggac
agtggggtggacattgctgaggcaggagggctgagtaaagacagcagtcctcggcccagt
aagaaccaggccacacagcagtcccaagtggcccagggacctgcagcactggcatccaaa
cagcagcctggctctccagtgcccacccctaccctggtacatgtggtaaagaatgccaat
actctgggtatcgctatagagggaggggcaaacacacgcctgccgctgccacgcatcgtc
accatacagaaggggggctcggcacacggttgtgggcagctgaaggtgggtcaggtgatt
ctggaagtgaacggtgtctccctgaggggccgtgagcaccaggacgctgcttgcatcatc
gctgaggccttcaagtccaaagagagggaccacattgacttcctggtcacagagttcaac
gcaaccctcctgcagggccttttgcagggtcgtattcattag
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