KEGG   Salmo trutta (river trout): 115164040
Entry
115164040         CDS       T08542                                 
Name
(RefSeq) whirlin-like
  KO
K21879  whirlin
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:stru03037]
    115164040
Cilium and associated proteins [BR:stru03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   115164040
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 115164040
NCBI-ProteinID: XP_029572030
LinkDB
Position
27:4629947..4733053
AA seq 893 aa
MNPHDLSCYASPGACPGKDGFSTTADGTAPQAFIQGEAFGEIRQVTLRRRKSNEGLGFSI
RGGSEHDVGIYVSLVEPGSFAENEGLRVGDQIVTVNDMLFDRLSHMEAVKVLKGCKKLTM
SVCSVGRIPGGFITNHIYTWVDPQGRSVSPPSDLEQEQHSTLGQQDSQRRGHTQERAEKT
ITLNLNDGLSLGLMIRGGAEYGLGIYITGVDPGSAADHAGLKVGGQLLEVNGRSFVAIPH
DEAVRILKTCRHLLVRVRDVGRLPHARTVVDQTKWISSPSPPSPPPVAESTASPATTRPS
SARATPVLGKPVCRGVWPPGSQVSLEEQAFLLLTDPERQTMGYYLQEYQEGHIGLEPLAM
ALFELFNTHAKLSLLSEVRSLVAPQDLELYDGLVLHREREALKAWHGEKGTLHPTSRCVH
TEPLASHSHYNPTTLCSAKHECSHGDSVEHDPGVRTSVLPDITLKEVRSTAESPPSFKPS
LPSGHTQTRNPKERDPSKRPSSSHSQSGLIFTAPTRLHQECHHKSLKAFSSSNHQTSTSP
SSGLHHTCPNPGHQNSPNPGTNHSANPSSGHQTSINSLHHTCQNSLHISTPTSDHHPHQA
CPSSGHHTCPGSLHHNPLWFPSAPPTQESTIKHPIFRSCSHEKPATSPKTASPCLSPCPS
PGLSPCLSPCPSPCPSLTVLKPPPCSPDRPCSPCSPSLSQGGQCVMAGIHRLTAEVRPQP
QQRGATLSQLSDSGQTLSEDSGVDIAEAGGLSKDSSPRPSKNQATQQSQVAQGPAALASK
QQPGSPVPTPTLVHVVKNANTLGIAIEGGANTRLPLPRIVTIQKGGSAHGCGQLKVGQVI
LEVNGVSLRGREHQDAACIIAEAFKSKERDHIDFLVTEFNATLLQGLLQGRIH
NT seq 2682 nt   +upstreamnt  +downstreamnt
atgaaccctcatgatctctcttgttatgcatcaccaggagcgtgtcccggcaaggatggt
ttcagcaccactgctgatgggaccgctccccaggctttcatccagggggaggcttttgga
gagatccgccaagtgacactgagacgcagaaagagcaatgagggtttagggttcagcatc
cggggaggctccgagcacgatgtgggaatatatgtgtcgctagtagaacccggatctttc
gctgagaacgagggattgagggtcggtgatcagatagtgactgttaacgacatgctgttt
gacagactctcacacatggaggcagtcaaggtcctgaagggctgtaagaagctgaccatg
tcagtgtgttctgtgggccgtatccctggcggttttatcaccaaccacatctacacctgg
gtggaccctcagggccgcagtgtctcccctccctccgacttggagcaggagcagcacagc
accctgggacagcaggacagccagagacgtggacacacacaggagagggctgagaagaca
atcaccctaaacctgaacgatggtctctctctaggcctgatgatcagaggaggggcagag
tacggcctgggcatatacattactggagtggacccaggctcagccgcagaccacgctgga
ctcaaggtgggcggccagctgctggaggtgaatgggcggagcttcgtggccatcccccat
gatgaggcggtgaggatcctgaagacgtgtcgccacctgctggttagggtgagagacgtt
ggccgcctgccccatgcccgcaccgtggtggaccagaccaaatggatcagcagccctagc
ccccccagcccaccgcccgtggcagagagcaccgccagcccagctactacacggccatct
tcagcgcgggctacacctgtattaggaaagccagtgtgtcgaggtgtgtggcccccaggt
tcacaggtatctctagaggagcaggcctttctgctgctgacagacccagagaggcagacc
atgggttactacctgcaggagtaccaggagggacacatcggtctggaacccctggctatg
gccctgtttgaactcttcaacacccacgccaagttatccttgctgtctgaggtgcgtagc
ctggtggctccccaggacctggagctgtatgatggtctggtgctgcaccgtgagagggag
gctctgaaggcctggcatggagaaaaaggaacgttgcatccaaccagccgctgtgtacac
acagagcccttagccagccacagccactacaaccccaccactctctgctctgccaagcat
gagtgctctcatggtgacagtgtagagcatgatccaggggtacgcactagtgtcctacct
gacattacattgaaagaggtgcggtctacagctgaatctcctccgtccttcaagccatca
cttccctccggccatacccagacgagaaaccccaaggagagggacccttccaagcgcccc
tcatccagtcactcccagtctggcctgatctttactgcccccaccaggctacaccaggaa
tgccaccacaaatccctcaaagccttcagctcctccaaccaccaaacctccacctcccct
agttctggcctccatcacacctgtcccaaccctggccaccaaaacagccccaaccctggc
accaaccacagtgccaatccaagctctggtcatcagacatccataaactctcttcaccac
acctgccaaaactccctccacatctccacccccacctctgaccaccacccccaccaagcc
tgccctagctctggccaccatacctgccccggctcccttcaccacaaccccttgtggttc
ccctctgctcctccaacccaggagtcgaccatcaagcaccccatcttcagatcctgttcc
catgagaagcctgctacctcccctaagactgcctccccttgtctctccccgtgtccctcc
cctggtctctccccatgtctgtccccctgtccctcgccctgtccctctctcactgtcctg
aagccgcccccatgtagcccagacagaccctgctctccttgttctccctccctcagccag
ggaggtcagtgtgtcatggcaggcatacacagactgactgctgaggtcaggccccagccc
cagcagagaggcgccacattgtcccagctgtcagacagtggtcagactctgagtgaggac
agtggggtggacattgctgaggcaggagggctgagtaaagacagcagtcctcggcccagt
aagaaccaggccacacagcagtcccaagtggcccagggacctgcagcactggcatccaaa
cagcagcctggctctccagtgcccacccctaccctggtacatgtggtaaagaatgccaat
actctgggtatcgctatagagggaggggcaaacacacgcctgccgctgccacgcatcgtc
accatacagaaggggggctcggcacacggttgtgggcagctgaaggtgggtcaggtgatt
ctggaagtgaacggtgtctccctgaggggccgtgagcaccaggacgctgcttgcatcatc
gctgaggccttcaagtccaaagagagggaccacattgacttcctggtcacagagttcaac
gcaaccctcctgcagggccttttgcagggtcgtattcattag

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