Salmo trutta (river trout): 115164174
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Entry
115164174 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180-like isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115164174
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115164174
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115164174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
Nop53
RING_XB3-XBAT31
zf-RING_6
zf-ANAPC11
CDC45
Motif
Other DBs
NCBI-GeneID:
115164174
NCBI-ProteinID:
XP_029572271
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All DBs
Position
27:5402946..5414017
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AA seq
387 aa
AA seq
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MEAPEGQARLQRGLPSPGQPHASYQRSSTTLRSPRQASVSISPTLLRPSIRIRTSTLSPR
RLSQRMDITETRCGMYTVREPGAFWVEPGIGIGRLSPRRRTRTRLFSHSSLELEEEEEEE
EEGEEEEEEDEEGGEAGVSGVMGVVTQTLTPAVPLSPAPAAMDRRMTKRERNRMKSLRKR
QRRRERWRQSQLLENRQSSTGNPSSSSEEEEDVSARDREGFICAVCLDVYFSPYMCHPCN
HIFCEPCLRTLAKNSPTNTPCPLCRTTITHVFFQTGEHELNHTARTFFPKEYLSRKQTFQ
KATCAKWPLPSCRKLFRIFGGFQRQASPIARRQFPHGGYRLDAMDFEDNSRGWRFDIDMV
IIYIYSVNWVIGFIIFCFLCYFFFPSF
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggaggccccagagggtcaggcgagactgcagagaggactaccctcacctggacaaccc
catgccagttaccaacgatctagcaccaccctcaggtctccacgccaagcctccgtctcc
atctctcccaccctactccgcccatccatccgaatcagaacctccactctgtcaccaagg
agactgtcgcaaaggatggacatcacagaaacgcgatgtggcatgtacacggttagagag
ccaggtgcattctgggtagagccagggattgggattggccgattgtccccgagaagaagg
actcggacacgcctcttctcccacagcagcttagagctggaagaggaagaggaggaggaa
gaagagggagaagaagaggaagaggaagatgaggagggaggagaggcaggggttagtggt
gtgatgggggtggtgactcagacgctgactccggctgtgcccttgtcccctgctccagca
gcgatggataggaggatgactaaaagagagaggaacaggatgaagagtctgaggaagagg
cagaggaggagagagagatggagacagagccagctgctggagaatagacagagttcgaca
gggaacccatcgagcagcagtgaggaggaggaggatgtgagtgccagggacagagagggc
ttcatctgcgctgtgtgtctggatgtttacttcagcccctacatgtgccacccctgtaac
cacatcttctgtgagccctgcctccgtaccctggctaagaacagcccgaccaacacccct
tgcccactctgcaggaccaccatcactcacgtcttcttccagacgggtgagcacgagttg
aaccacacagcacggacgttcttcccaaaggaatacctctcccggaaacagactttccag
aaggcaacctgtgcaaaatggccgctcccaagctgcaggaaacttttccgtatttttgga
ggtttccagaggcaagctagtccaatagcaaggcgtcagtttccccacggggggtaccgt
ctagacgccatggactttgaggacaattctcgcggctggcgctttgacatcgacatggtc
attatctatatctattctgtcaactgggtcatcggcttcatcatcttctgctttctctgc
tacttctttttcccttctttctaa
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