Salmo trutta (river trout): 115164206
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Entry
115164206 CDS
T08542
Name
(RefSeq) lipoxygenase homology domain-containing protein 1-like isoform X1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115164206
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115164206
Cilium and associated proteins [BR:
stru03037
]
Other cilia and associated proteins
Stereociliary proteins
115164206
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Other domain-containing proteins
Others
115164206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
DUF7755
Motif
Other DBs
NCBI-GeneID:
115164206
NCBI-ProteinID:
XP_029572316
Ensembl:
ENSSTUG00000021308
LinkDB
All DBs
Position
27:6892588..6940179
Genome browser
AA seq
2289 aa
AA seq
DB search
MIEATSKGTKKKKDNQENVMGSKDKKSKDDDKKSKKDKKEGEQPREQGDEEGDGKKKKKK
AKKGSGGDSDEDTKKGKGKKKKLVENYVEIYENELRNYEPDTMENYEDEYHKKKVYEVVT
ITGDERGAGTDANVFITLFGEYGITPKVHLASNTEKRSRTAFEKNKTDVFRIKTHNVGPL
KKIRIEHDNTGLNASWFLDRVVVTDITRPHMRFYFTCNNWLSKVEGDNLFVRDLLGSLDP
MDLPKYNKYVVSVFTADVKGSGTDADVFINIFGEFGDTGERRLDNKKDNFEKGTEDKFTL
EAPHLGKIRKITLGHNNKGSSAGWFVDKVLLDDMGNKSLYEFPINRWFAVDEDDGKIQRD
ILVGGSEPTGIVYHVQVVTGKVRGAGTNSNIHILMHGTKGLKNSGKIFLQGGKFERDLTD
IFNVEISALLSPLSRVTIGHDNGGVNAGWYCEKIVVFCPFTGIEQTFPCSKWLDEDEGDG
LIERELYEMVSLRQRKQKKHPWSLWIWTSDLPGAGTDASIYFQIYGEKGKSDEMRLDNKA
DNFEQGQLDKFMVELPDLGKLTKCRIWHEKRSPFAGWHLSKASLMKTLTKEKFKFPCERW
LDTNEDDNELVRELPATGELIAEPLPLIKYRVTVCTGKFGGSGTDATVFLNLIGDLGDTG
ERTLVNCKNNVNKFEKGNMDEFIIEAVSIVQVRRVRIGHNGRGGGCGWYLEKVMVREEGQ
AESQVVEFPCGRWLDRNEDDGQIVRELVPFSDGQRLYNVSYHVSVKTGSVSGGSSNSTVF
VKLYGEKGDTSKMMLVVSDNNLRNYFEVGRVDVFTVETFDIGQINRLLIGHNNEGMNAGW
FLDSVQIMVPASGSQYMFPSHRWLCKDEADGKTEVVIYPSEILDIKQLMNYEITVVTGDV
SFAGTNANVFIQLYGDKGKTEVVNLASRSNNYERATTEIFKIEASDVGKIFKVRIGHDEA
GIGSGWFLEKVYVKHLIMGMVPKAKKKDDKKKKKKKKEAEEEETEEVMQEIVQTYVFPCS
RWLSRGEEDGELVVELLPEDTDELEENTYEVCVFTGDMLGAGTDANVYINIYGENGDTGE
RLLRKSGNLNKFEAGQEDVFTITAIELGPLRKLRIRQDNAASYSSWYLDRVEIVDTKDET
TYYFPCNRWLAVDEDDGQIARELVPVDEAFMKRDDDEEGTGAATLGLEQKAMSTTLTLKI
KTGEKKHAGTDANVFAILYGEKDDTGIINLKACKTHKNKFERGMVDEFTVEAVDLGELEK
LRIGHDNSGGSPGWFLDWVEIDAPSQGQRLRFPCGRWLDNGEDDGAIVRDLYPNELQTEL
YVPFVPYEIKIYTSDVFGAGTDADVFIVIYGWKGLCTQQKHLCVNKRERRLFFERGAEDM
FIVELEDVGDVIEKIRIGHDNRGTNPGWHLDRVEIRRLLRKGKGSETTILPCERWLAKSE
DDGETVRELVPSDIITEKLLKEGKLKHTEMEVEDALETHTYKVSVRTGDMYGGGTDAKVF
LTIYGDLGDTGERTLSKSESNSNKFERGAVDKFSIEAVDLGQVFKIRIRHDNSEFMGADW
YLDQVEVVDMETEEVYMFLCERWLSKKKEDKRIERTFYIKDYEGERNVDPNKKSTQAKIG
LDRNANKKKKKKVVVEEGPVIPYHFTVSTAMDPDASTTARVYVIVMGPNDIETERLWLDL
PEGKKSFAAGTMENFQCYGTDVREIKRVELGHNGATPESCWLVDELSVAVPTKGIKYIFQ
CKCWLAKDRGDGLTGRLFNVLDANSINIVRKIIYVATVITGDTQDAGTDTNIFLSVFGAN
GSTEEMLLPKNEDRFERGQEDTFNLEIDDIAPLKKIRVRIDGSGSRPDWFLDRIVMHNLT
TEEVSVFTNENWLSKTKGPKRTKICELAAVVDEEEMVERTTYIIQVQTSDIGGAGTDANV
FLIVFGENGDTGTLALKEGGSRNKFERKSKDVFRFPDILSLGELSKIRVWHDNKGPAPGW
HLEYIDVKDETMDQNFRFPCGRWLAKNVDDGQIMTELACANNDILDFSDKTKYEIATTTA
NTDDADTKENVWIVLEGKRGRSKEFVLENSSKKKRFLCGATDTFEFSSKHVGEIAGICVG
HTTKDSKKVKGEAFWHVLEVVVTEKGLGNKYLFHCDAQIPLAAKRDKFLTFECFKTIESF
ASKVRSLVPVKYEIIVITGDVKRAGTDSNVYITIYGSNGDSGKRALKQKFRNLFERGQTD
CFILEMLDLGELLRVKVEHDGSSHNSGWYLECVEVTNTANSVTTIFLCGKWLDPQKADGQ
IQRVLYPKY
NT seq
6870 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggccaccagtaagggaaccaagaagaagaaagacaaccaggagaacgtcatg
ggttcaaaggacaaaaaatctaaagacgacgacaaaaaatccaaaaaggacaagaaagag
ggcgaacaacctcgcgaacagggagatgaagaaggggacggcaaaaagaagaagaaaaag
gccaagaaaggctcagggggggacagtgatgaggacaccaaaaaggggaaaggcaaaaaa
aagaagctggttgagaactacgtggagatctatgagaatgaactacggaactatgagcca
gataccatggagaactatgaggatgagtaccacaagaagaaagtgtatgaggtggtgacc
atcactggagatgagaggggggcaggcaccgatgccaacgtgtttatcactctcttcggg
gaatatggcatcactccgaaggtgcacctggctagcaacacggaaaagaggagtagaaca
gcctttgagaagaacaaaacagacgtctttaggatcaaaactcataacgttgggcctttg
aagaagatacggatagagcatgataacacaggtctgaatgccagctggttcttggacaga
gtggtggtgacagatattaccagacctcacatgaggttctacttcacctgtaataactgg
ctcagtaaggtggagggcgacaacctgtttgtcagggacctgctgggcagcctcgacccc
atggacttgcccaaatataataagtatgtagtgagcgtgttcacagcagatgtaaaaggc
agtggaacagatgcggatgtcttcatcaacatctttggagagtttggtgacaccggtgag
aggcggttggacaataagaaggataactttgagaaaggcacggaggacaagttcacttta
gaagctccccacctcggcaaaataaggaagattaccctgggtcacaacaacaaaggctct
tccgctggatggtttgtggacaaggtgctcctggatgacatgggaaacaagtctctgtat
gagttccccatcaaccgctggttcgccgtcgatgaggatgatgggaagattcagagggac
atcctagttggaggcagtgagcccacaggtattgtgtaccacgtccaggtggtgacaggg
aaggtccgaggagctggcaccaactccaacatccacatactgatgcacggcaccaagggc
ctgaagaacagcggcaagatcttcctgcaggggggtaagtttgagcgtgatctgacagac
atctttaacgtggagatatctgccctcctcagccccctcagccgagtcaccatcggacac
gacaatggaggagtcaacgctggctggtactgcgagaagatagtggtgttctgcccgttc
acagggatcgagcagaccttcccttgcagtaaatggctggatgaggatgaaggtgatgga
ctgatagagagagagctctacgagatggtctcactaaggcagaggaaacagaagaagcac
ccctggtctctgtggatctggacgtcagatttgcctggcgcaggaacagacgcatccatt
tacttccagatctatggggagaagggcaagtcagacgagatgagactggacaacaaagca
gacaactttgaacagggccagctggataagttcatggttgagctacctgacctggggaag
cttacaaaatgtcgcatctggcatgaaaagagaagcccttttgcagggtggcatttgagc
aaggcatctctgatgaaaacgttgacgaaggagaagtttaagttcccctgtgagcgctgg
ctggatactaacgaggatgacaacgagttagttagagagctgcctgccactggagaactg
attgctgaacccctgcccttgataaagtaccgtgtgaccgtgtgcacggggaagtttggc
ggcagcgggacggacgccactgtcttcctcaatctgattggtgacctgggagacacaggc
gaacgtacgctggtcaactgcaaaaacaacgtcaacaagtttgagaaaggcaacatggat
gagttcattattgaggcggtgtcaatcgtgcaggtgcggcgagtgcgtatcgggcacaac
gggcggggcggaggttgtggctggtacttggagaaagtgatggtcagggaagagggacag
gctgagtctcaggttgtagagttcccctgcggcaggtggctagatcggaatgaggatgac
ggacagattgttcgggagttggtgccattttcagacggacagcgtctctacaatgtgagc
tatcacgtgtcggtgaagacaggcagcgtcagtggaggcagctcgaactccacggttttt
gtgaagctgtatggggagaagggagacaccagtaagatgatgctggtggtctctgacaac
aacctgcgcaactactttgaggtgggccgggtggatgtgttcactgtggagacatttgac
attggacagatcaaccgtctgttgattggccacaacaacgaggggatgaatgctggttgg
ttcctggacagtgtccagatcatggtgccggccagtgggagtcagtacatgttccccagc
caccgttggctctgtaaggacgaggcggacggcaagaccgaggtggtgatctaccctagc
gagatcctggacattaaacaattgatgaactatgagataacagtggtgacaggtgatgtg
agctttgctggaaccaacgcgaacgttttcatccagctctacggtgataagggcaagacc
gaggtcgtcaatctggccagcaggtccaacaactatgagagagcaaccactgagatattc
aagatagaagccagcgacgtaggaaagatcttcaaggtgcgtatcggccatgacgaggcg
gggatcggctccggctggttcctggagaaggtatacgtcaaacacctaatcatgggcatg
gtgcccaaggcgaagaaaaaggatgacaagaagaagaagaagaaaaagaaggaggcggag
gaggaggagacagaggaggtgatgcaggagatagtgcagacgtatgtgttcccatgctcc
cgctggctgagccggggggaggaggacggggagctggtggtggaactgctgcctgaggat
acagacgagctggaagagaacacctatgaagtgtgtgtcttcaccggggacatgctgggg
gctgggactgacgccaatgtctacatcaatatttatggggagaacggggacacaggggag
cgcctcctcaggaagtcaggcaacctcaacaaatttgaggcagggcaggaggatgtgttc
accataacagccattgagctgggccccctgaggaagctacgcattcgtcaggacaacgca
gcgtcttactcctcttggtacctggatcgcgtggagatagtggacaccaaggatgaaacc
acgtactacttcccatgtaaccgttggctggcggtggatgaggatgatggacagatcgcc
agggagctggtgcccgtggatgaggccttcatgaagagggacgatgatgaggaggggaca
ggtgcagccaccctggggcttgagcagaaagctatgtccacaactctaaccctgaaaata
aagacaggagagaagaaacatgctggaacggatgccaatgtttttgctatcctttatgga
gaaaaagatgatacagggataatcaacctgaaggcgtgtaagacccataagaacaagttt
gagcggggcatggtggatgaattcactgtggaggctgtggacctgggagagctggaaaag
ctacgcatcggccacgacaactcaggtggctctcctggttggtttctggactgggtggag
atcgacgccccctctcagggccagagactccgtttcccatgtggccgttggctagataac
ggagaggatgatggggccatagtgagagatctgtaccccaacgagctccagactgaactc
tacgtgccatttgtcccctatgagatcaagatatacacaagtgatgtgtttggtgctggg
acagatgcagacgtgtttatagttatttatggctggaagggcctctgcacccagcagaaa
cacctgtgtgtcaacaagagagagagaagactgttcttcgagagaggagctgaggatatg
tttatcgtggagttggaggatgtgggtgatgtcattgagaagatccgtattggccacgac
aacaggggcaccaaccccggctggcaccttgacagagtggagatcagacgcctactcagg
aagggaaagggttcggagacgaccatcttaccgtgtgagcgctggttggccaagtcagag
gacgatggggagacggtgagagagctcgttccctctgatattatcacagagaaactgctg
aaggaaggaaaactgaaacacacagagatggaggtggaggatgcccttgaaactcacacc
tataaggtgtctgtgagaacaggtgacatgtacggaggagggaccgacgccaaagtgttc
ctcaccatctacggagacctgggagacacgggggaacgcacactcagcaagtctgagagc
aacagcaacaagtttgaaagaggggcggtggataagttctccatcgaggcggtggatctt
ggccaggtgtttaagatccgtatccgccacgacaactccgaatttatgggggcagactgg
tacctggatcaggtagaggtggtggacatggaaacagaggaggtatacatgttcctgtgt
gagcgttggctttccaagaagaaggaggacaagcgcatcgagagaaccttctacatcaag
gattatgagggtgagaggaacgttgatccaaacaagaagagcacccaggccaagataggg
ctggacaggaatgcaaacaagaagaagaagaaaaaggtggtcgtagaggagggtccagtc
atcccctaccacttcactgtatctactgctatggaccctgacgccagcaccacagccagg
gtttatgtcatcgtcatgggacccaatgacattgagacggagcgtctgtggctggacctg
cctgaggggaagaagagcttcgctgctgggaccatggagaacttccagtgttacggaact
gacgtgagagagatcaagagggtggagctgggtcataatggggcaaccccagagagctgc
tggttggtggacgagctgtcggttgctgtgccgaccaaaggcatcaagtacatcttccag
tgtaagtgctggttggccaaggacagaggcgacggtctcaccggcagactgttcaacgta
ctagatgccaacagtatcaatatcgtccggaagatcatctatgtggccacggtcatcaca
ggcgacacccaggatgcagggacggacaccaacatcttcctgtctgtgtttggagccaat
gggagcacagaggagatgctgctgcccaagaatgaggacaggtttgagagaggtcaagag
gacacgtttaacctggagatagatgacatcgctcctctgaagaagatcagggttcgcatc
gacggctctgggagtcgccctgactggttcctcgacaggatcgtgatgcataacctgact
acagaggaggtgtctgtgtttaccaatgagaactggctgtcgaagaccaaagggcccaaa
aggactaagatctgtgagctggcagcggtggtggatgaggaggagatggtggagaggacc
acctacatcatccaggtccagaccagcgacatcggaggcgcgggcactgatgccaacgtg
ttcctgatagtgtttggggagaacggagacactggtacgctggcactaaaggagggcggt
agcagaaacaagtttgagcggaagtcaaaagacgtgttccgcttcccagacatcctcagc
ctgggagagctttccaagatccgcgtatggcacgacaacaagggtcctgctccgggttgg
cacctggagtacattgatgtgaaagatgagaccatggaccagaatttccgtttcccatgt
ggccgctggctggccaagaatgtggacgacgggcagatcatgacagagctggcctgtgcc
aacaacgacatcctagacttcagtgacaagaccaaatatgaaattgccactacaacagct
aacactgatgacgcagacaccaaggagaatgtgtggatcgtgctggaaggaaagagggga
cgttcaaaggagtttgtgctggagaatagttcaaagaaaaagagattcctttgtggagcc
accgacacatttgagttttcctccaagcatgtgggtgagatagctggcatctgtgtgggg
cacacaactaaagacagcaagaaggtgaagggtgaggccttctggcacgtcctggaagtt
gtggtgacagagaagggacttggaaacaagtatttattccactgtgatgcccagatccct
ctagcagccaaacgggacaagtttctgaccttcgaatgctttaagaccattgagagcttt
gccagcaaagtccgcagcctcgtgcccgtcaaatacgagataatcgtcatcaccggcgac
gtcaaaagggccggaactgactctaacgtttacatcaccatatatggctccaatggggat
tctggaaagcgtgccttaaagcagaagttccgaaacctttttgagcggggacaaacagat
tgttttattttggagatgttggatttaggggagctgctgagggtcaaagtggagcatgat
ggctcaagccacaactctggttggtacctggagtgtgtagaggttaccaacacagccaac
tcggtgaccactatcttcctgtgtgggaagtggttggaccctcagaaggcagatgggcag
atacaaagagtgctctaccccaaatactga
DBGET
integrated database retrieval system
