Salmo trutta (river trout): 115164308
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Entry
115164308 CDS
T08542
Name
(RefSeq) armadillo repeat protein deleted in velo-cardio-facial syndrome-like isoform X1
KO
K28154
splicing regulator ARVCF
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115164308
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115164308
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
Arm_2
Cnd1
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
115164308
NCBI-ProteinID:
XP_029572509
Ensembl:
ENSSTUG00000027951
LinkDB
All DBs
Position
27:complement(11506822..11748975)
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AA seq
1094 aa
AA seq
DB search
MEDYEVCSAASILASVKEQEARFERLTRALEEERRNVSLQLERSNITADRLGGTGPNANL
PPNSQPLAWQQVVMQEQSPSNQTSLAMMQEPQEMVEETVTIEEDPGTPTSHVSVVTSDDG
TTRRTETKDMSTNLKVTKVIKTITRHTYLPVTIIETLVVPEGSISPQSKPSTPAPTSSPT
PSQTDTVTKMVKTVTTRTVRQVPLGPDGLPLPEGSSPLGSYTDSIDRRYLKNGERYITTP
QATSTLTRSYNNYNDSYTDTLPPDAGGSQYGGRHYGLHDGYGIGDVTDNYGSLSRGVNFR
PPRYPYAMANSYRTENSYGTLPIRKDDYGHVAQPQVPMGSSSVDLNRSQPERFQPEPYGL
EDDRRSLGPEEEEPYDLDPDYSTASRRQGTLPGTNRGRTVREPLRDGPRVRGYEDPIEAE
LVDERHPYIHGMYAAPLAQPERGSMASLDRLAGRRSPSIDSIRKDPRWRDPDLQEVIAML
GHPIDPVKSNAAAYLQHLCYENDKIKKDVRQLKGIPVLAGLLDHPKAEVHRKACGALRNI
SYGKDHDNKVAIKNCDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHGLQ
TMTNEVIIPHSGWEHEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECEGLV
DALLHALQSAVGKKDMDNKSVENCVCIMRNLSYHVHKEIPGAEKFTDPSALQAPGSVGPQ
RKKKDDAGCFGGKKAKEEWFNQGRKNGENDKSYDTLDLPKRTEPTKGFELLYQPEVVRLY
LSLLTESQNYNTLEAAAGALQNLSAGQWTWSNYIRATVRKEKGLPILVELLRSDADKVVR
AVAIALRNLSIDRRNKDLIGSYAMRDLVSNLPSGQQRPAKNLEEDTVVAILNTIHEIVTD
SSENARSLIQAQAVEKLVAINKTSQSPRENKAASHVLQTVWSYKDLRNALTKEGWNKSHF
QPTASGAPKAAKNGKPGYDDTTLPLMEKNQGQSVTAGETGDPPGLAYCGELSTKKNGSGD
MIPMDELGPDGYSTIDQRDKDCKYKSSGDGSVDLTEREPLKNDTNTKHYVRSNRPAVNLV
DACDVKPQPVDSWV
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggaggactatgaggtgtgctcggccgccagtatcctggcttcggtgaaagagcaggag
gcgcgtttcgagcgtctgacccgggcgctggaggaggagcgacgcaacgtctccctgcag
ctggagcgttccaacataacagccgacaggctgggtgggactgggcctaatgctaacctg
ccacccaacagccaacccctggcctggcagcaggtggtgatgcaggagcagagccccagt
aaccagacgtctctggccatgatgcaggagccccaggagatggtggaggagacggtcacc
attgaggaggaccctggcacgcccacctcccacgtgtccgtggtcacctccgacgacggc
accacgcgacgcacagaaaccaaggatatgtcaactaacctgaaggtgaccaaggtgatc
aaaaccatcacccgccacacttacctgccagtgaccatcatcgagaccctggtggttccg
gaaggttccatctcaccgcagtccaaacccagcaccccggcgcccacctcttctcccacc
ccatcacagacagacacagtgacgaagatggtgaagacggtgaccacgcggacggttcga
caggtgcccctgggccccgacggcctgcccctgcccgagggctcctccccgctgggcagc
tacacagactccatcgaccggcgctacctgaagaacggcgagcgctacatcaccacgccg
caggccacctccacgctcacgcgctcctacaacaactacaacgactcctacaccgacacg
ctcccccccgacgccggcgggagccagtacggcgggcgccactatggcctccacgacggc
tacgggattggagacgtgacagacaactacggcagcctgtcgcgtggcgtcaacttccgg
ccgccccgctatccctacgccatggctaacagctatcggacggagaacagctacgggacc
ttacccattcggaaggatgactacggccacgtggcccagcctcaggtgcccatgggcagc
agcagtgtggacctgaaccggtcccagccagaacgcttccagccagagccctacggactg
gaggacgaccgccgcagcctgggccccgaggaggaggagccctatgacctggaccctgac
tactccaccgccagccgacgccaaggcacgctgccgggcaccaaccgtggcaggaccgtg
agagagccgctccgcgacgggccacgtgtcagggggtatgaggaccccatcgaggcagag
ctggttgacgagcgacacccctacatccatggcatgtacgcggcccccctggcccagccc
gagagagggagcatggccagcctggaccgcctggctggccgccgctcgccctccatagac
agcatccgcaaggacccgcgctggcgtgaccccgacctgcaagaggtcatcgccatgctg
ggccaccccatcgacccggtcaagtccaacgccgccgcctacctgcagcacctgtgctac
gagaacgacaagatcaagaaggatgtgcgccagctgaaggggatccctgtgctggcaggg
ttgctggaccaccccaaggctgaggtccaccgcaaggcctgcggagccctgaggaacatc
tcctacggcaaagaccacgacaacaaggtggccatcaagaactgcgacggtatcccagcc
cttatccgcctgctgaggaagaccaacgacatggaggtccgtgagctcatcacagggacc
ctgtggaacctgtcttcctatgagcctctgaagatggtgattataaaccacgggctgcag
actatgaccaacgaggtcatcatcccccactcaggctgggagcacgagcccaacgaggac
tccaagccccgcgacgcagagtggaccaccgtcttcaagaacacctccggttgtctgagg
aacgtgagttcggacggggccgaggcgaggcgcaggctgagggagtgtgaggggctggtg
gacgctctgctccacgccctgcagtcagctgtgggtaaaaaagacatggacaacaagtct
gtggagaactgtgtgtgtatcatgaggaacctgtcctaccacgttcacaaggagatccca
ggggccgagaagttcaccgacccatcagcgctgcaggccccgggctctgtgggccctcag
aggaagaagaaggacgacgcaggctgcttcggagggaagaaggccaaagaggagtggttt
aatcaaggcaggaaaaacggcgagaatgacaaaagctacgacacgctggatctccccaaa
cgcacagaacccacaaaaggttttgagctgctgtaccagccagaggtagtgaggctgtac
ctgtctctgctcactgagagccagaactacaacactctggaagctgcagcaggggccctg
cagaacctcagcgccggacagtggacctggtccaactacatacgagccactgtgaggaag
gagaagggtcttcccatcctggtggagctgctgcgttctgatgctgacaaggtggtccga
gccgtggccatcgccctgcgtaacctctccatcgaccgccgcaacaaagacctgatcggg
agctatgccatgagggatctggtgagtaacctgcccagcggtcagcagcggccagccaag
aacctggaggaagacacagtggtggccatcctcaacaccatccacgagatcgtgacggac
agctccgagaacgcacgctccctcatccaggcccaggccgtcgagaaactggtggccatc
aacaagacaagccaatcaccacgtgagaacaaggctgcctcccacgtgctgcagacggtg
tggagctacaaggacctgagaaacgccctgaccaaggaaggatggaacaagagccacttc
cagcctacagcgagcggcgcccctaaagcagccaagaacggcaagccaggctacgacgac
actaccctacccctgatggagaagaaccaaggtcagtctgtgacggcaggcgagactggg
gatcctccgggcctggcctactgtggtgaactgagcaccaagaaaaatggaagtggtgat
atgatacctatggacgagcttggtccagatggctactccaccatcgaccagagagacaag
gactgcaagtacaagagtagtggagacgggtcagtggacctgacagaacgggagccattg
aagaatgacacaaatacgaaacactatgtcaggagtaacaggcctgcagtcaatctggtg
gatgcttgtgacgttaaacctcagcctgttgactcctgggtctaa
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integrated database retrieval system
