Salmo trutta (river trout): 115164361
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Entry
115164361 CDS
T08542
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115164361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stru03009
]
115164361
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
115164361
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
115164361
NCBI-ProteinID:
XP_029572620
Ensembl:
ENSSTUG00000038723
LinkDB
All DBs
Position
27:complement(13968780..13972612)
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AA seq
309 aa
AA seq
DB search
MFSFNMFDHPIPRAFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERRYKAPEEPTEEEGDPSTWTDMDMRFRAFTGSGNRLDGK
KKGIEPSPVPIDPSDIKRGIPNYEYKVGRITFIRNSRPQPRKTIEDEDSEFIAFSGEGQS
LRKKGGRKP
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttcaacatgtttgatcacccgatcccacgggctttccaaaaccgcttctcc
actcaataccgctgctactctgtgtccatgctggcgggtcccaacgaccggtcggatgtg
gagaaaggaggaaaaattataatgccaccatcagcacttgatcaactaagcagacttaac
atcacctaccccatgttgttcaaactgaccaacaagaactcagacagaatgacacactgt
ggtgtcttggagtttgtagcagatgagggtatttgttacctgccacactggatgatgcag
aatctcctgctggaggaagggggcctggtccaggtggagagcgttaacctcatggtggca
acatactccaagttccagcctcagagcccagacttcctggatatcactaaccccaaagca
gtgttggaaaatgccttgagaaactttgcctgcttaaccacaggagatgttattgcaatt
aactacaatgaaaagatctatgaactgcgagtgatggagactaagccagacaaggcagta
tctatcattgaatgtgatatgaatgtggactttgatgctccgctgggttacaaagaacca
gagagacgttacaaagcaccagaggagcccacagaagaggaaggagaccccagcacttgg
actgacatggacatgagattcagagccttcactggttcaggcaatcgtctggatggcaaa
aagaaaggcattgagcctagccccgtccccatcgatcccagtgacattaaaagagggatt
cctaactacgagtacaaggtcggaaggatcaccttcatcagaaactccaggcctcagccc
aggaaaacaatagaggatgaggattcagaattcatcgccttttctggtgagggacagtca
ctacgcaagaaaggtggcagaaagccttga
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