Salmo trutta (river trout): 115164421
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Entry
115164421 CDS
T08542
Name
(RefSeq) serine/arginine-rich splicing factor 9-like
KO
K21123
serine/arginine-rich splicing factor 9
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115164421
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115164421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115164421
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
SR proteins
115164421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
115164421
NCBI-ProteinID:
XP_029572730
Ensembl:
ENSSTUG00000050880
LinkDB
All DBs
Position
27:complement(15645336..15658100)
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AA seq
258 aa
AA seq
DB search
MADGRIYVGNLPADVQERDIEDIFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVY
GRNGYGFGDCKLRVEHPRSASSKFNGSMGGSGRGSGEGGPGGPKGRFGPPTRRSEFRVIV
TGLPPTGSWQDLKDHMREAGDVCFTDVQRDGEGVVEFLRREDMEYAMRRLDRTEFRSHQG
ETSSIRVHGEMGASRGRSRSRSRSRGRYSPAYQGRGSPPPRYQSPPARRLSRHSPPPRRP
SAAHRSPSSRSPPPRHYR
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggcaggatctacgtgggtaaccttccagctgatgtgcaagagagggacatt
gaggatatattcttcaaatatggcaaaatcagagacattgagttgaagaacaatagaggc
actattccctttgcctttgtgcgctttgaagatccacgggatgccgaggatgcagtctat
gggaggaatggttatggatttggagactgcaagcttcgcgttgagcaccctcgctctgcc
tcctctaaattcaacggttctatgggtggtagtggtcgagggagtggggaaggaggtccc
ggtggtcctaaagggaggtttgggcctcctactcggagatcagagttcagagttattgtg
actggcctgcctccgactggaagctggcaagacttgaaagatcacatgagggaggctgga
gatgtttgtttcacagatgttcagcgggatggggaaggggtggtggagttcctgcgcaga
gaggacatggagtatgccatgcggcgcctggacaggacagagttcagatcacaccagggg
gagacttcatctatcagagtccatggagagatgggagccagcagaggacgctcgaggtcc
cgttccagatccaggggacggtactcacccgcttatcaaggtcgcggctctccaccccct
cgttatcagtcgccccctgctcgcagattgtctcgccatagcccccctccacgtcgcccc
tctgcagcacaccgtagcccatcaagccgcagcccaccccctcgtcactaccgatag
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