Salmo trutta (river trout): 115164498
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Entry
115164498 CDS
T08542
Name
(RefSeq) tetratricopeptide repeat protein 28-like
KO
K24936
tetratricopeptide repeat protein 28
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115164498
Cilium and associated proteins [BR:
stru03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
115164498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_16
RPN7
TPR_17
TPR_14
TPR_11
TPR_NPHP3
TPR_9
TPR_19
PUB
TPR_6
AP4E_app_platf
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
115164498
NCBI-ProteinID:
XP_029572902
Ensembl:
ENSSTUG00000049548
LinkDB
All DBs
Position
27:17932333..18274353
Genome browser
AA seq
2453 aa
AA seq
DB search
MEKQATLKEKFSIFGSRTVGRAAQHEAEEEGGRCGLNKAEFMERVQQSNEACQRGDFQAA
VSLYGDALRADPQNCILYSNRSAALLKLGRYQASLDDAVKACLLNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTAAHHTASVVVLESALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSTGYM
QQDLEVSKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFENAVQCH
EQHLGIAKALTSKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEQPIEMRAY
AGLGHAARCMQDLERAKQYHQQQLAIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLSIAQELTDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLRLSPDLQDMESEGKVCHNLGYAHYCLGSYQDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGNFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVTGAIQFY
EQQLALAHQMKERRMEACAYASLGATYRLVQKYDKSLGYHTQELEVYQELGDVPGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPGVEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEAVLDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQDQE
KAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECSGKAQAYGELGALHSQLGNYEQAI
SCLERQLGIARDTQDRPLEGDASCGLGVVYQSMGEYETALRCHQSDLEIAEETGSPARQG
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGLRLAEQLSRREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHS
TDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPY
TPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGMPEGGPDLH
EGGGGGVASGSSLEQHIASAREALGVESYYSRGCSSSETESEAGDLLDQQFEELNNKLNS
VTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGCSSLPRRPSSLSKPPLRALYDL
LIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIR
GMGTISKSHSRRAGPASCGGVSMAAVVGNPRLPSSVMDRWLWGPMPSAEEEALMVSELLG
CQPLAGSFATKERVMSALTQAECAHFATHISWKLAALVLTPNPESVPGGAGGSFGSSYTI
PESLHLQDDGSDAESICDSPPLQEFLLTAADILDLRLPVKLVVLGSYQESSSKVTADGVV
GLTRAFLAAGAQCVLVSLWPVPVSASKVFVHAFYTALLNGTKASAALADAMKTVQSSKQY
SHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQYPERARDALRVLLHLVEKSLQRIQNG
QRNSMYTSQQSVENKVGGVPGWHALLTAVGFRLDSAGTGIPAAVFFPTADPGDRLQQCST
TLQSILGLPPPALQALCKLITASEAGEQLINRAVKNMVGMLHQVLVQLQTGEKEQDFSLL
PIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKQANRRTMHFALQSLLALFD
STELPKRLSLDSSSSLESLASAQSVSNPLPLGYPNPPFSPPCLDNLASDAISVYSLSSVA
STMSFASKSECDFLGHRQRGGATAHFSAHKHPHVPRSRSSPHGAAAAAGGGRGDDEEYEG
FSIISSEPLGSHCDSLPLPLGHGQRHLHRGGRGVVGGSSSGTGRGYQVSVSSRGSVSTPT
SPVKTSLVPSPNSPFQKVPGKVSSSDTGESDQSSTETDSTVKSQEEKTVPLDPQELAQKI
LEETQSHLRAVGSLQRAEGAAAGATARSSAFRSSETSAFSRPSSSASVRAQSSPRPKPPS
RSSSLQKISSGYNSPAASETSLKDSSHPSPTLDSHAQFKLKYPSSPYSGHISRSPSNVSP
SSGHQSPAGSAPSPALSYSSTGSACSSPADAPDLDRLRRGVIDEKVVAIHNLKTFWANAA
AQQQQQHLGPVRALRGAPGSLVSAKRDVLSLLNLSPRHCSPSDAQDSLELRELGLHSLDR
GSKNPSNGHNPRKMTPSPTISTSSSPGARSIRLPAGNGYKFLSPGRFFPSSKC
NT seq
7362 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaagcaactttaaaggaaaagttttcaatcttcggctcccggactgttggc
agagctgcacagcatgaagctgaagaggaagggggccgatgtggcctcaacaaggcagag
ttcatggagagagttcagcagagcaacgaggcctgccaacgtggtgactttcaggctgcc
gtgagtctctatggcgacgccctgcgagccgacccacagaactgcatcctctacagcaac
cgctctgcagcccttctcaaattgggacgctaccaggcttccctggacgacgctgtcaag
gcctgtctactcaaccccaagtggcctaaggcatacttccgacagggtgttgcccttcag
taccttggtcgccatgccgacgcgctggccgcctttgcctcggggctggcccaagacccc
aagagcctgcagctattggtgggcatggtggaggctgccatgaagtccccactacgagag
tcactggaacccacctaccagcagctgcagaagatgaaactggacaagagtccgttcgtg
gtggtgtcagtgattggtcaagagctgctgacagcggcccaccataccgcctccgtggtg
gtactggagtccgcattaaagatcggcacctgcagcctcaagctgcgcggctccgtcttc
tcagcgctcagcagtgcccactggtccctgggcaataccgagaagagcaccggatacatg
cagcaagacctggaggtctccaaaacactaggtgaccaaacaggtgaatgtcgtgcccat
ggtaacctgggctcagcattcttctccaaggggaactaccgcgaggccctgactaaccat
cgccaccagctggtcctggccatgaagctcaaggacagggaggcagcctctatggccctg
agcagcctgggtcatgtgtacacagccatcggggactaccctaatgccctggccagccac
aagcagtgtgtcctactggccaagcagtccaaggaccagctgtcggaggcacgagagctg
ggcaacatgggcgccgtctacatcgccatgggtgactttgaaaacgctgtccaatgtcac
gagcagcacctgggcatcgccaaggccctgaccagcaagagggaggaggcccgtgcctac
agcaacctgggcagtgcctatcactaccaccgtaactttgacaaggccatgtcctaccac
acccatgtgctggagctggcccaggagctggaggagcagcctatagagatgagggcgtac
gctggactggggcacgctgcacgctgcatgcaggacctggagagagccaagcagtaccac
caacagcagctggccatcgctgaaggcctgaaggacagggctgcagagggaagagcctcc
tccaacctgggcataatccaccagatgaaaggagactatgaaactgcactgaaactccac
aaaacccacctctccatcgcccaggagctcactgactatgctgctcagggccgggcctac
ggtaacatgggcaacgcctacaacgcattgggggcctttgaccaggccgtgcgctaccac
cgccaggagctacagatctccatggaggtcaacgaccgagcctcccaggcctccacccat
ggtaacctggccgtggcctaccaggctctgggggcccacgatcgcgccctgcagcactac
cagaaccacctcaatatcgcccgcgagctgcgagacgtccagagtgaggctcgcgccctg
ggcaacctggggaacttccactgctcccggggagagttcccccaagccgtgccctactac
gagcagtacctccgcttgtcccctgacctccaggacatggagagtgaggggaaagtctgc
cacaacctgggctacgcccactactgcctgggaagctaccaggacgctgtcaagtactat
gagcaggacctggctctggctaaggacctgcatgacaagctgagccaggccaaggcctac
tgtaaccttggactggccttcaaggctctgggtaacttcaccaaggcagaggagtgtcag
aagtacctgctctctctagcccagtctcttaataatgcacaagcccgcttcagagccctg
ggcaacctgggggacatctttgtctgcaagaaggatgtgaccggagctatccagttctat
gagcagcagctcgccctggctcaccagatgaaggagcgcaggatggaggcgtgtgcctac
gcttccctgggcgccacctacagactggtgcagaagtacgacaagtccctgggctaccac
acccaggagctggaggtgtaccaggagctgggcgatgttcccggggagtgtaaagcccac
ggacacctggcagctgtctacatggccctcgggaagtatgccatggccttcaagagctac
gaggagcagctagagctgggccgcagactgaaggacccgggcgtagaggcccaggtctac
ggcaacatgggcatcaccaagatgaacgtaggggtgatggaggaggctataggctacctg
gagcagcagttggccaccctgcagcagctgagtggcaacgaggccgtactggaccggggc
agggcctatggtaacctgggagactgttacgaagccttaggggactttgaggaggccatt
aaatactacgaccagtacctgtctgtggcccagagcctgaaccgcatgcaggaccaggag
aaggcttaccgaggtctgggcaatggacacagggcgatgggtaacctgcagcagtccctg
gtttgctttgagaagcggctggtggtggcccatgagttgggggagtgtagcgggaaggcc
caggcctacggggagctgggggcgctccacagccagctggggaactacgaacaggccatc
tcctgtcttgagcgccagctaggcatcgcccgcgacacccaggaccgcccactagagggc
gacgctagttgcggcctgggggtggtgtaccagtccatgggggagtacgagacagccctg
cgctgccaccagagtgacctggagatcgcagaggagacgggcagccccgcccgacagggc
cgtgcctatggcaacctgggcctcacctatgagtcactgggcaactatgagcgtgcggtg
gtgttccaggagcagcatctgagtgttgcagctcagaccaacgacctggcagccaagacc
ctggcctacggtagcctggggaggacacaccacgcactgcagaactactcacaggctgtc
atgtatctgcaggaaggcctacggctggcggagcagctgtctcggcgtgaggatgaggct
aagatccgccatcgtctggggctgtctctgtgggccagtgggaacctggaggaggcccag
caccagctctaccgagcgtctgcactgtttgagaccattcgtcacgaggcccagcacagc
accgactacaaactgtctctgtttgatctgcagacttcctcctatcaggcactccagagg
gtcctcgtcagcctaggccaccatgacgaggcgttggcggtggcagagcggggtcggaca
cgagcatttgctgacctgctggtggagaggcagacaggccagcaggactcagacccctac
accccagtcacagtggagcacatcctggacacggtgaacagccagagggccctggtgctc
tacttctccatggctgctgggtacctgtacagctggctgctggctccaggagcaggcatc
ctgaagttccatgaggtgtacctgggagagggcatgccagagggcgggccagacctccat
gagggtgggggagggggtgtggccagcggctcatctttggagcagcacattgccagtgct
cgggaggccctgggagtagagtcctactacagcaggggttgttccagcagtgagacagag
agtgaggcaggggacctgttggaccagcagtttgaagagctcaacaacaaactcaactct
gtgactgaccccactggcttcctccgcatggtgtccagaaacaacctcttcaacaggagc
tgccagagtatgaccagcctgttcagtaacacaatgtccccagccaaagatggctgctcc
tctctgccccgccgacccagcagcctcagcaaacctcctctccgtgccctctacgacctg
ctcatcgcaccaatggaagggggcctgatgcactccagtggtcccgtgggtagacacaga
cagctggtgttggtgttggagggggagttgtacctcatccccttcgccctgctgaagggc
agctcctctaatgagtacctgtatgaacgcttcagcctcatcgctgtgccctccatccgg
ggcatggggaccatctccaagagtcattctcggcgggcggggccggcttcctgcgggggc
gtgtccatggcggcggtggtggggaaccctcgtctgccgtcgtctgtgatggaccgctgg
ctgtgggggcccatgccctctgccgaggaggaggccctcatggtgtctgagctgctgggc
tgccagcccctggctggatcctttgccaccaaggagagggtgatgagtgccctcacccag
gccgagtgtgcccacttcgctacccacatctcatggaagctggctgccttggtgctcaca
cccaacccagagagcgtacccggcggggcagggggctcgtttgggagcagctacaccatc
ccagagagcctgcacctgcaggatgatgggagtgacgcggagagtatctgtgacagccca
cccctgcaggagttcctgctcaccgctgctgacatactggacctgaggctgcctgtcaaa
ctggtggtgctggggtcataccaggagtccagcagtaaggtgacagcagacggtgtggta
ggtctgaccagggccttcctggctgctggggcccagtgtgtcctggtgtctctgtggcct
gttcctgtgtcagcctccaaagtgttcgtacatgccttctacaccgctctgctcaacggg
accaaggccagcgctgccctcgcagacgccatgaagactgtccagagcagcaagcagtac
tcccacccctccaactgggcaggttacatgctgattggtaatgatgtcaagctaaacagc
ccctcgtccctgattggccaggctctagcagagatcctacagtatccagagagggcacgg
gatgctctgcgagtcttactgcacctggtggagaagtctctccagaggattcagaacggc
cagcgtaactccatgtacacgtcccagcagagtgtggagaacaaggttgggggcgtccca
ggctggcatgccctgctgactgctgtgggcttccgcctggactcggctggcaccggcatt
cctgctgctgtgttcttccccacagcagaccctggagacaggctgcagcagtgtagcacc
accctgcagtcaatacttggtctaccgcccccagctctccaagccctgtgtaaactcatc
actgcctctgaggcaggcgagcagctcatcaaccgggctgttaaaaatatggtgggaatg
ctccaccaggtgctggtccagctgcagacaggggagaaggagcaggacttctctctgctg
cccatccaggtgtccatcagtgtgcagctctggagactgccagggtgccatgaattcctg
gctgcactagggttcgacctgtgtgaggtggggcaggaggaggtggtactgaagacgggg
aagcaagccaaccgccgcaccatgcactttgccctccagtccctactggcactatttgac
tccacagagctgccaaagcgtctcagcctggacagctcgtcctccctggagtccctggcc
tcggcccagtctgtctccaaccccctaccgctgggctaccccaacccacccttctcccca
ccctgcctggacaatctggcctcagatgccatctccgtctacagcctgagctccgtggcc
tccaccatgagttttgcatccaagtcagagtgtgacttcctgggccatcgacagcgtggt
ggggccacagcacacttctctgcccacaaacacccacacgttccccgcagtcgctcctct
cctcacggggcggctgcagcagcaggagggggccggggagatgacgaggagtatgaaggc
ttctccatcatcagcagtgagcctctgggaagccactgtgactccctgcctctacctctg
ggtcacggtcagcgccacctccaccgcgggggcaggggtgttgttggggggtccagctca
ggcactgggcggggttaccaggtgtctgtgtcgtcacgaggcagtgtcagcacccccacc
tcccctgtcaagaccagcctggttcccagccccaactctcccttccagaaggtgccaggc
aaggtgagcagctcagacacaggtgagtcggaccagtccagcactgagacagacagcacc
gtcaaatcccaggaagagaagactgtccctctggatccccaagagctggcccagaagatc
ctggaggagacccagagccacctgcgggcagtggggagtctacagcgggctgagggggct
gcggctggagccacagcccgcagctctgccttccgctcctcagagaccagcgccttcagc
cgtcccagtagcagcgccagtgtccgcgcccagtcctccccacgacccaaacctccgtcc
cgctcttcctctctgcagaagatcagctctggttacaacagccctgcagcctcggagacc
tccctgaaggatagcagtcacccctcccccaccctggacagccatgcccagttcaagcta
aaataccctagctccccctatagtggtcacatctcccgctctcccagtaacgtgtccccc
agctctggccaccagtccccagctggcagtgccccatctccagctctctcctactcctcc
acgggctctgcctgctccagccctgccgatgccccagacctggaccgcctcagacgggga
gtaattgatgagaaggttgtggccatccacaacctgaagacattctgggccaatgcagcg
gcccagcaacaacagcaacatctgggtccagtccgtgctctccgtggagccccaggatcc
ctggtctctgccaagagagatgtgctgagccttctgaacctctccccacgacactgctcc
cccagcgacgcccaagacagcctggagctgcgggagctggggctgcactcgctggacagg
ggcagcaagaacccctccaacggacacaaccccagaaagatgaccccctcgcccactatt
tccactagcagcagccctggtgctcgctcgatcagactacctgctggcaatggatacaag
ttcctctcccctggcaggtttttcccctcctccaaatgctga
DBGET
integrated database retrieval system
