Salmo trutta (river trout): 115164583
Help
Entry
115164583 CDS
T08542
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1-like isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115164583
Membrane trafficking [BR:
stru04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115164583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
115164583
NCBI-ProteinID:
XP_029573078
Ensembl:
ENSSTUG00000027743
LinkDB
All DBs
Position
27:21085145..21110080
Genome browser
AA seq
1494 aa
AA seq
DB search
MKPDIHTLAHHLKQERLYVASEKQLIQRLNGDVLKTAERLYRAAWITKQQRINLDRLILT
SAEASPAECCQHAKVLEDTQFLDGYKTLGFQESIYGEFLGRVRENPRLVASCLVAGERLN
QEHTQGVIYTVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSIL
FKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPSKVTERFTPAQQERLFGEKGSE
GYRQKVAAAVEANEAKLVTLVNKFIGYLKQNTYCFPHNLRWIVSQMYKTLSCVERLEVGE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADGDGDPR
RKNSLAKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTVAYMTHSQLLCLVDFVR
SVMAGDHLREEEHILLETLMANVPQSRTVKSNSLELTPSNTPQLSPTTTPANKKNRNLGQ
QLATSWDSTTTTLSAHIPLVTPFASRSRSRTELAQQGEAEASSMESLQEVMPEEVLVISL
GSSPQTIPGMMSENEVLTVQQTDGAQGYTPADDTKHHCKPDKTLRFSLCSDNLEGISEGP
SNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEHATTQDNLDDKLRKFEIRDMM
GLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAVENMLGSLLCLPGSGSVLL
DPYGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGVGSTSDDTEVREVSSRP
STPGLSVVSATSEDIPNKTEDLRSECSSDFGGKDSVTSPDGEESSHGAHHSLASPPSQAD
SLLAMFDPLSSGEDSSTGTIVRPKVHYARPLHPPPDPPIPETCALGQDPRYSLFTPHCLA
QAELEHTKQRHSYTDRLVRSRSSDIVCPGRRPTSDPGLNRRAAAEERDHVGAFLMGPFSS
PSKDSLKGEVEERKDSDEEKSDRNRPWWKKRFQSAIPKAPIAALRKRDKQEKDNMGHERV
PQDDPLSRNSQAQAAEDILDKYRNIKRTSPSEGATAAAYDATGQCLSRSATPTHTRMLNE
FERVNVLYTELCGEECVHNSPRDEALQNMSTDDLPDSASQTAQQHDSNKFSFSDAKKKLR
LALCSAESVAFPLMAPATTRNGLPDHTDFEDNEIVCFLKVQLAEAINLQDKNQMAQIQET
TRCVSRFDARTCKKLLAAIAEDYRKRAPYIAYLTRCRQGLQTSHAHLERLLQRVLRDKEV
ANRYFTTVCVRLLLEHMEAKSLDFIKAFQGCTASDDKTAAVEDFLRYLYGAMAHDAIWQY
ASEDQLQDAQMAIERSVMNRIFKLAFYPNQDGDILRDQLLQEHIARLSKVVTANHKALQI
PEVYAREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVP
VLVFVLIKANPPCLLSTIQYINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagacatccacactctggcccatcacctgaagcaggagcggctgtatgtggcc
tcagagaagcagctgattcagcgactcaatggggacgtgctgaagactgctgagaggctg
taccgtgctgcctggatcaccaagcagcagaggatcaacctcgaccggctcatcctcacc
agtgctgaggcttccccggccgaatgctgccagcatgccaaagtgctggaggacacacag
ttcctggatggttacaagactctgggcttccaagagagcatctatggggagttcctgggc
cgggtgcgggagaatccccggctggtggcctcctgcctggtggctggggagaggctgaac
caggagcacacacagggggtcatttacactgtcttcacctcactctatggcaactgtatc
atgcaggaggatgagagctacctgttgcaggtcctgcgatacttggtggagtttgagctg
aaggagagcgacaaccctcggcggctgctgcggcgaggcacgtgcgccttcagcatcctc
ttcaagctcttctctgaggggctgtattccgccaagctcttcctaaccgccaccctccac
gagcccatcatgcagctgctggtggaggacgaggaccacctggagacggacccctccaag
gtgacagagcgcttcacgccggcgcagcaggagcgcctgtttggggagaagggctcggag
ggctataggcagaaggtggcggctgctgtggaggccaatgaggccaagctggtgaccctg
gtaaacaagttcatcggctacctgaagcagaacacctactgcttcccccacaacctgcgc
tggattgtgtctcagatgtacaagacgctgtcgtgtgtggagaggctggaggtgggagag
gtgcggaccatgtgcacggacctgctgctcacctgcttcatctgcccagccatagtcaat
cctgagcagtatggcataatctcagatgcccctatcaacgaggtggctcgcttcaacctc
atgcaggtagggcagcttcttcaacagttggcaatggctgacggtgatggagaccccagg
aggaaaaacagtttggccaagttcgataagagctgcgtagctgccttcctggatgtggta
atcggagggagagctgtggagacgccgcccatgtcctccatgaacctacttgaaggcctc
agcaggactgtggcgtacatgacacacagtcagctgctctgcctggtggactttgtacgg
agtgtgatggcaggggaccacctccgggaggaggagcacatactcctggagaccctaatg
gccaacgtgccccagtcccgcacagtgaagagcaacagtctggagctcaccccctccaac
accccccagctttccccaaccaccacccccgccaacaagaagaacaggaacttaggacaa
cagttagcaacgtcctgggactccacaaccaccaccctgtctgcacacattccattagtt
accccttttgcctcccgcagtcgcagccgtactgagctggcccagcagggggaagcagag
gccagctccatggagtccctgcaggaggtgatgccagaagaggtgctggtgatctcacta
ggaagcagcccgcagaccatccccggcatgatgtcagagaatgaggttttgaccgtgcag
cagactgatggagcacaagggtacactcctgcagacgacaccaagcaccattgcaaacca
gacaaaaccctgcgtttctccctctgcagtgacaacctggagggtatctcagagggtccg
tccaaccggtctaactctgtgtcgtctctggacctggagggagagtctgtgtcagagctg
ggagctgggccatcggggagcaatggggtggaggctctacaactgctggagcatgaacat
gccaccactcaggacaacctggatgacaaactgaggaagtttgagatccgagatatgatg
ggcttgacagatgaccgggatatctctgagactgtgagtgagacctggagcacagacgtg
ctgggcagcgactttgaccccaacatggacgaagatagactgcaggaaatagctggggcg
gctgtagagaacatgctgggcagcctgctgtgtctaccaggctccggttcagtgctgcta
gacccatatggatccaccatctccgagaccaccagcgaggcctggagtgtggaggtcctg
cccagtgactcagaagccccagacctgaagcaggaggagcgtctacaggagctagagagc
tgctcaggggtgggcagcacctctgatgacacagaggtcagagaggtcagctctcggccc
agcaccccagggctcagtgtcgtctcagcgacatcagaagacatccccaacaagacagag
gacctgcggtcagagtgcagctcggactttggggggaaggactctgttaccagtccagat
ggggaggagtcatcccacggagcacatcacagtttggcctctccgccctctcaggctgac
tccttactggccatgtttgatcccctctcctccggcgaagattcctccactggtaccatt
gtgaggcccaaggtgcattacgccaggccccttcatcctccccctgaccctcccatccca
gagacctgtgccctgggacaagatccccgctactccctgttcacgccccactgcctggcc
caagccgagctggagcacaccaagcagcgccactcctacacagacaggctggtacgcagc
cgcagctctgacattgtgtgcccaggccgccgacccaccagcgacccgggcctgaaccgc
agggctgcagccgaagagcgggaccatgtcggggccttccttatggggccgttctcgtct
cctagcaaggactccctgaaaggagaggttgaggagagaaaggacagtgatgaggagaag
tctgatcgcaacagaccgtggtggaagaaacgctttcagtcagccattcccaaagctccg
atagcagccttacggaaaagggacaagcaggagaaagacaatatgggccatgaacgtgtc
ccacaagatgaccctctgtccaggaactcccaggcccaggcagcagaagacatccttgac
aagtacaggaacatcaagaggaccagtcccagtgaaggagccactgctgcagcctacgac
gccacaggtcagtgtctttctcgctcagctacacccactcacacacgcatgttaaatgaa
tttgagcgtgtgaatgtgttgtacacagagttgtgtggagaggagtgtgtgcacaactcc
cccagagacgaagctctgcagaacatgtccacagacgacctgccagactcagccagccag
acagcccagcaacacgactccaacaagttctcattcagtgatgcaaagaagaagttgaga
ctggccttgtgttcagcagagtctgtggctttccctctcatggctcctgccaccacgcgc
aatgggctgcctgaccacacagactttgaagacaacgagatcgtgtgcttcctgaaggtc
cagctggcggaggccatcaacctgcaggataagaaccagatggcccagatccaggagacc
acgcgctgcgtcagccgcttcgacgcacgcacctgcaagaagctgctggctgccattgct
gaggattacaggaagcgggcaccctacatagcgtatctgacgcggtgtcggcagggcctg
cagacatcccatgcccacctggagaggctgctgcagagggtgctgagggacaaggaggtg
gctaaccgctacttcaccacagtctgtgttcgcctcctactggaacacatggaggctaag
tccctggacttcatcaaagccttccaggggtgcacagcgtcagatgacaagacggctgcg
gtggaggacttcctgcgctacctgtacggcgccatggcccatgatgccatctggcagtac
gccagcgaggatcagctgcaggatgcccagatggccatcgagcgcagcgtcatgaaccgc
atcttcaagctggccttctaccccaaccaggacggggacatcctgagagaccagcttctt
caggaacacatagcacgtctctcaaaagtggtgacagcgaatcacaaagctcttcaaatc
ccagaggtgtatgcgagggaggctccctggccgtctgcccagtcagagatccggaccatc
agtgcctacaagacccctcgggacaaagtgcagtgtattttacgcatgtgttccaccatc
atgaatcttctgagtctggccaacgaggactctgtccccggagctgacgattttgtccct
gtgctcgtctttgtcctgataaaggcaaacccgccttgcctgctgtccactattcagtac
atcaataatttctacgccagccggctgagtggggaggagtgctattggtggatgcagttc
accgcggcagtggaattcattaagaccattgacgatcgcaagtga
DBGET
integrated database retrieval system
