Salmo trutta (river trout): 115164616
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Entry
115164616 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115164616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115164616
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115164616
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115164616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-rbx1
WWE_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_Vps41
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
PHD_NSD
zf-UDP
Motif
Other DBs
NCBI-GeneID:
115164616
NCBI-ProteinID:
XP_029573154
Ensembl:
ENSSTUG00000037905
LinkDB
All DBs
Position
27:23153767..23210826
Genome browser
AA seq
650 aa
AA seq
DB search
MARPGSGVLVSVNGLGYPPQNLARVVVWEWLNEHGRWRPYNVTTCHHIENVLKGDARGTV
VLGQVDAQLAPYVIDLQSMHQFRQDTGTMRPVHRNFYEPSSAPGKGVVWEWENDSGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMVQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCSCQQCILVNSTRAASNAILASQHRKLYGGATGPSGATGTL
TVVRQSNTFAGTTLWSPTSSAGTNNIQHNNISAGGGQAKAEQVQSLLSSANFPCSPTLPS
LPPAHGHSHAHAHSHSHHAIINGQNNLNRPGTQRISMGTARGAIPPGVPPLPVKNLTVSG
PVHPAIAGMTGILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGVNGIRRKTKKKHLR
RGKNPEDVVRRYTEKVKVAPDEDCTICRERLVMSSGYEGVKGIKPEVVGKLGKCGHMYHL
LCLVAMYNNGNKDGSLQCPTCKAIYGEKTGTQPPGKMEYHVIPHCLPGYPEAKTIRIVYD
IPAGLQTTEHPNPGKKFSARGFPRHCYLPDNNKGRRVLKLLIMAWDRRLIFTIGTSSTTG
EPDTVVWNEIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVGQDNLKD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcacggccaggctctggggtgctggtgtcggtcaacgggctggggtacccccctcag
aacctggcccgggtggtggtgtgggagtggctgaatgaacatgggcgctggcggccctac
aacgtgacaacttgccaccacatagagaacgtactgaagggggatgcgcgggggactgtg
gtccttggacaggtggatgcccagcttgccccttacgtcatagacctgcagtccatgcac
cagttcagacaggacacaggcaccatgaggccggtccacaggaacttctatgagccgtca
tcggccccggggaagggtgtggtgtgggagtgggagaacgacagcggctcctggacgccc
tacgacatggagatctgtgtgaccatccagaacgcctatgagaagcagcacccctggctg
gacctgacctctctgggcttctgctacctcattgacttcaacagcatggtccagaccaac
cggcagagccagaggaaacgccgcctgcgccgacgcatggacctggcctaccctctcatc
atgggctccatccccaagtcccagtcttggcccgtgggagccagctccggccagccctgc
tcctgccagcagtgcatcctggtcaacagcacgcgggctgcctccaatgccatcctggcc
tctcagcaccgtaagctgtatgggggggctacggggccttcaggggctacaggcacgctc
accgtggtacggcagagtaacaccttcgctggaaccaccctctggtcccccacctctagt
gccgggaccaataatatacaacataacaacataagcgcaggaggaggccaagccaaagct
gaacaggtgcagtctctcctgtctagtgccaacttcccatgttccccgacgctgccatcc
cttccgcctgcacatggccactcccacgcccacgcacactcccacagtcaccatgccatc
atcaatgggcagaacaacctgaaccggccgggcacccagcgcatttccatgggcactgcc
agaggagccatcccaccaggggtccctcccctccctgttaagaacctgactgtctctgga
ccagttcacccagcaattgcaggtatgacaggtatcctgatgtgtgcggctggcctgcct
gtgtgtctgaccagggcccctaaacccattctgcacccgccgcccataaacaagagtgac
atgaagcctgtgcctggggtcaacggcatccgccgcaagaccaagaagaagcacctcagg
agagggaaaaacccagaggatgtggtgcggagatacacagagaaagtgaaagtagcccct
gatgaggactgcaccatctgcagggagaggctggtgatgtcatcaggctacgagggtgtc
aagggcataaagccagaggtggtgggcaaacttggcaagtgtgggcacatgtaccatctg
ttgtgcctggttgccatgtacaacaatggcaacaaggatggcagtctgcagtgccccact
tgtaaagctatctatggggagaagacaggcacacagccccctgggaagatggagtaccat
gtcatcccccactgcctgccaggctacccagaggccaagaccatccgcatcgtctatgac
attcctgctggcctacagaccacagagcatcccaacccagggaagaagttcagcgctagg
gggttcccccggcactgctacctcccagacaataacaaaggcaggagggtcctgaagctc
ctgatcatggcgtgggaccgccgcctcatcttcaccatcggcacgtccagcaccacggga
gaaccagacaccgtggtgtggaatgagatacaccacaagacagagtttggctccaacctg
acgggacacggctacccagaccccaactacctggacaacgttctgacagagctgtcagcc
caaggggtgggacaggacaacctgaaggactga
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