Salmo trutta (river trout): 115164639
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Entry
115164639 CDS
T08542
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
stru
Salmo trutta (river trout)
Pathway
stru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115164639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115164639
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115164639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
115164639
NCBI-ProteinID:
XP_029573190
Ensembl:
ENSSTUG00000040169
LinkDB
All DBs
Position
27:23674475..23701603
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AA seq
373 aa
AA seq
DB search
MEMERSQSSLSSTDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRS
RGFGFVTFVDQAGVDSVSAVTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKAYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVDKVCEIHFHEINNKMVE
CKKAQPKEVMSPMGSARGRSRVMPYGMDAFMLGIGMLGRGQHCFTQTQTHDCPFAIGYPG
FQAATYASRSYTGITPGYTYQFPEFHLERTPLLTSSHPPELTAIPLSAYGPMAAAAAAVA
RGSTPSRSGGFLGTSSPGPMADLYAAANQESAVSSYLSAASPSPSTGFGHSLGVRHSPYH
GPLIATAFTNGYH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaaaggagccagagcagcctgtcatccacggactcccctcacgatccctgc
aaaatgttcataggcggtctcagctggcagacgacacaagagggattgaaagagtacttt
tgcaagtatggcgaggtgaaagagtgcatggtgatgcgggatccagttactaagcgctcg
aggggttttggatttgtcacttttgttgaccaggccggtgtggattcagtttcggcagta
accaggcatgagttggattcaaaaacaattgatccgaaagttgcgttcccgcgtagagcc
cagcccaagctagtgactcggaccaagaagatctttgttggaggtctgtccgtgaacacg
accatcgaggatgttaaggcgtatttcgaccagttcggaaaggttgacgatgccatgctc
atgtttgacaagaccaccaacagacacagaggatttggctttgtcacgtttgagaatgag
gacgtggtagataaagtgtgtgagatccacttccatgagataaataacaaaatggtggag
tgtaagaaggctcagcccaaggaagtgatgtcacccatgggctcggccagggggcgctct
cgggtgatgccctatggcatggacgctttcatgctgggtatcggcatgctgggcaggggg
cagcactgtttcactcaaacacagacccatgactgtcctttcgccataggttacccaggg
ttccaggcagctacgtatgctagtcgaagttacactggcatcacccctggatatacctat
caattccctgaattccatttagagaggaccccccttctgacatcatcccacccccctgag
ctcacagccattcctctgtcggcatacggaccaatggcagcagcggcagcagcagtagct
agaggctccaccccctctcgttcaggagggttcctgggaaccagcagccctggcccaatg
gcagacttgtatgcagcagccaatcaggagtctgctgtcagcagctacctcagcgctgca
agcccctccccaagcactgggtttggccacagtctgggggtaagacacagcccttatcac
ggccctctgattgctacggctttcactaacggctaccactga
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integrated database retrieval system
