Salmo trutta (river trout): 115164721
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Entry
115164721 CDS
T08542
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115164721
04020 Calcium signaling pathway
115164721
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115164721
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115164721
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
CATSPERB_C
Motif
Other DBs
NCBI-GeneID:
115164721
NCBI-ProteinID:
XP_029573336
Ensembl:
ENSSTUG00000029587
LinkDB
All DBs
Position
27:25761540..25935148
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AA seq
1873 aa
AA seq
DB search
MSMKMYGLGPRNYFHSSFNCFDFGVIIGSIFEVIWAVVKPGASYGISVLRALRLLRIFKV
TKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGMFNFEEETPTTNFDT
FPAAILTVFQILTGEDWNAVMYHGIESHGGVRWGMFSSIYFIVLTLFGNYTLLNVFLAIA
VDNLANAQELTKDEEEQEVAITKKMALQMVKEVKEVSPMSAANISITALHSMLYTGQHGA
ERAKPASFVKQSRGALSRSSSVCSVNSLKEQQKSLKMMSVWEQRTTQLRRHNLRASSEAL
YSELDPEERLRMSSALHIRPDMKTHMDRPLVVKPHDGPGPMGHLKPQTPEETDNPGDPAG
PQPRRRHRDRERPIDEADENGDPGKEGRHHVHHSRSKYPNGTRGKEGKSEQSHSREGGRR
HHHQTSVDEGGGGGTGTGERVHRHHHSHRQAREGNSTVNSGRKDERRSRHKDGRSGERCY
RGENGANGERRRHKTHSYRGQSTLAGEEHSERERRKGHRDRYVESEGDSMATSTQHDPGD
QRWGTEITEDSDNQRNVRRTGWTAVHIPPVTITSPPGETTLIPMNSIDCETLPMNEEKKT
LEALTRDGPRPILPYSSMFVFGQTNMVRRLCHYIVSLRYFEMCILVVISMSSIALAAEDP
VQANAPRNNVLKYLDYVFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSGALV
AFAFSSFMGPPQGVPRGSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKN
VFNILIVYMLFMFIFAVIAVQLFKGKFFYCSDESKGLEKDCRGHFLDYDKDEVAAQPRVW
KKYEFHYDNVLWAFLTLFTVSTGEGWPDVLKHSVDATFEDQGPSPGYRIEISIFYVVYFV
VFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFAINAKPLTRYMPENVQSFQ
YRMWKFVVSPPFEYAIMIMIALNTVVLMMKFHGAPDFYEAMLKHFNIVFTALFSLECILK
IIAFGPLNYLKDAWNVFDFVTVLGSITDIVVTEINTTDRLLNLSFLRLFRAARLIKLLRQ
GYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNEDTSITHHNNFRTF
LQALMLLFRSATGEAWHEIMLSCLSHRACDERSGNLGKECGSDFAYFYFVSFIFLCSFLM
LNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKYLDMYQILLHMSPP
LGLGKICPPRVAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIKLASGMVAQRLSDAE
LKKELSQVWPSLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRAKRLKEQQQQQQ
QQNATGSQGKVGALFKPILPLTHKQEKVKEKAMTNVEPPCELLPQPQSQALPRPSSTLLN
NGGTLPGHDGTMKGSSSWVSEKSREVHRPRKKTPVQRGQSEDVPSLTIPQSVEMRKMDTS
CSTVPGPGSGLESQGRAVSMPRLNAELQRSKSRHSPGTLLAPVPDCSPMKRSASTHAPQR
PQEVNLHEHTLERPSTEERRHHHRHHHRCHHHRERDKKQRSLDRTPSTIGAPGDPAAEPS
SRDRVQDRGRSHERKNHSTARENQRYYSCDRYSSREHCHTTKSATTSCATSPSEVQEPSI
NKQGSGSVKGSPVMLTSGAITPSRGRRQLPQTPLTPRPVVTFKTANSSPVHFVSAQCGSG
LPTLSPGRLSRGLSEHNALLHSGTSHIPSPITRISSEPFLGYSHSDPQGQGRPYCNLRDE
LLSPYGARARSPRTARPQMRPGALHLPPPPQQRRAVPNGYHFTFGGNGNASLGSGSGARP
PRYYHEAEEDEWC
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaaaatgtatggactaggacctaggaactacttccattcctctttcaattgt
tttgattttggagtgattataggcagtatttttgaggtgatctgggcagttgtgaaacct
ggggcctcctacggcatcagcgtcctgcgagctctccgtctgctcaggattttcaaagtc
accaagtactggaactctctgaggaacctggtggtctctttactcaactccatgaagtcc
attatcagcctgctcttcctcctcttcctcttcatcgtggtgttcgccctactgggcatg
cagctctttgggggaatgtttaattttgaggaggagacaccaacaacaaacttcgacacc
tttccagcagccattctcacagttttccagattctgacaggagaggactggaatgcagtg
atgtatcatgggatagagtcccatgggggcgttcggtggggaatgttctcctctatctac
ttcatcgttctcaccctgtttggaaactacactctgctcaatgtcttcttggccattgct
gttgacaaccttgcaaacgcacaggagctcactaaggacgaggaggagcaggaggtggcc
atcactaagaagatggccctccagatggtcaaggaggtgaaggaggtcagccccatgtcg
gcagctaacatctctatcacagcgctacacagtatgctgtacacaggccaacatggagcg
gagagggcaaagccagcaagttttgtaaagcaaagtcgaggtgcactctctcgcagctcg
tccgtctgcagcgttaattcacttaaggagcagcagaagtctctgaagatgatgtcagtg
tgggagcagcgcaccactcagctgaggagacacaacctgcgggccagcagtgaggccctg
tacagcgagctggaccctgaggagaggctacgcatgtcctccgccctgcacatccgccct
gacatgaagacccacatggaccggcccctggtcgtgaagccccatgacggccccggcccc
atgggccacctcaagccccagacccctgaggagacggataaccctggggacccggccggc
ccccagccacgtaggcggcaccgggacagggagagacccatcgacgaggccgatgagaat
ggagatccaggcaaagagggtaggcaccatgtccatcacagtcgcagcaagtaccccaac
gggactcggggtaaggaggggaagagtgagcagtcgcatagccgagagggtggcaggagg
caccaccaccagacctcagtggacgagggaggtggagggggaactgggacgggagagaga
gtgcaccgccaccaccactcccacagacaggccagagagggtaacagcactgtcaacagc
ggacgcaaggatgagcgcaggtcacgccacaaagatggacgctcgggagagagatgctac
aggggagagaacggggccaatggggagaggaggagacacaagacccacagttacaggggc
cagtccacactggcgggagaggagcacagtgagagggagaggaggaagggccacagggac
agatatgttgagtctgagggcgactccatggccactagcacccagcatgatcctggagat
cagaggtggggcacagagataactgaggactcagacaaccagaggaacgtcagacggaca
ggatggacggccgtccacataccccctgtcaccatcacctccccgcctggggagaccacc
cttatccccatgaacagtatagactgtgagacattgcctatgaacgaggagaagaagacc
ctggaggcgttgactcgggacggacccagacccatcctcccctacagctccatgtttgtg
tttggccagaccaacatggtgcggcgtctgtgtcattacattgtgagcctgcggtacttt
gagatgtgtatcctggtagtgatatctatgagtagcattgcattggctgctgaggaccct
gtccaggccaatgctccacgcaacaatgtgctcaagtatctggactacgtctttacggga
gttttcacatttgagatggtgattaagatggttgacctgggccttctgctccatcctggt
tcttacttcagagatctctggaacattctggacttcattgtggtcagtggagcactggtg
gcatttgcattttcgagcttcatgggaccgccacaaggtgtgcccagagggtccaaagga
aaggacatcagcaccatcaagtccctcagagttctgcgagtcttacggcccctcaagacc
atcaagcgcctgccaaagctgaaggctgtgtttgactgtgtggtcaactccctgaagaac
gtcttcaacatcctcattgtctacatgctcttcatgttcatcttcgctgtcatcgctgtg
cagctgttcaagggaaagttcttttactgctccgatgagtccaagggactggaaaaggac
tgcagaggtcatttcctggactacgataaggatgaggtggccgcccagcctcgggtgtgg
aagaagtatgagttccactatgacaacgtgctgtgggccttcctcactctcttcactgtg
tccactggagagggctggcccgatgttctgaagcactctgtggacgctacctttgaggac
cagggtcccagtccaggctaccgtatagagatctccatcttctacgtggtctacttcgtg
gtctttccctttttcttcgttaacatctttgtggccttgatcatcattaccttccaggag
caaggagacaaggccatgtcagagtgcagcctggagaaaaacgagagggcctgcattgac
tttgccatcaacgccaagccactgacgcgttacatgccagagaacgtgcagtccttccag
taccggatgtggaagtttgtggtgtcacccccgtttgagtacgccattatgatcatgatc
gccctgaacaccgtggtgctcatgatgaagttccatggagctccagacttctacgaggcc
atgttgaagcacttcaacatcgtcttcactgccctcttctctctggagtgcattctgaag
atcatcgccttcggaccactgaactacctgaaggatgcctggaacgtgtttgactttgtg
accgtgctgggaagtataactgacatcgtggtcacagaaatcaatactacggaccggctt
ttgaacctgagttttctgaggctgttcagagcagctcgtctcatcaaactactgaggcaa
ggctacaccatccgtatcctgctgtggaccttcgtccagtcctttaaggccctgccctat
gtttgccttctgatagcaatgctgttcttcatctatgccatcatcggtatgcaggtgttt
ggaaacattgagctcaacgaggacacatccatcactcaccacaacaacttccgcaccttt
cttcaggctctcatgctactgttcaggagtgccacaggggaggcgtggcatgagatcatg
ctgtcgtgtttgagtcacagagcctgtgatgagaggtcaggcaacctggggaaggagtgt
ggcagcgactttgcctatttctactttgtgtccttcatcttcctctgctctttcctgatg
cttaatctgtttgtggctgtgatcatggataactttgaatacctgacccgagactcttct
atactggggcctcatcatctggatgagttcatccgtgtttgggctgagtacgaccctgct
gcctgtggccgtatcaagtacctcgatatgtatcagatactcctccacatgtccccaccc
ttaggtttgggaaagatatgtccgccaagagtcgcctacaagcggctagtcaagatgaac
atgcccatcgctgatgacaacacagtccacttcacctccacactcatggccctgatccgg
acggccctggagatcaaactggcctcagggatggttgcccagcgtctctctgatgctgaa
ctgaagaaagagctctcccaggtttggccaagcctctcacagaagactatggatctgttg
gtgacaccacacaaacccaatgagcttactgttgggaaggtgtatgcagccctgatgatc
tttgactactacaagcagaaccgagccaagaggctcaaggaacagcaacagcagcagcag
caacagaatgctactggctcccagggaaaggtgggggctctgtttaaaccaatactgccc
ctgactcacaagcaggagaaagtgaaggagaaggccatgaccaacgtggagcctccctgt
gagctactgcctcagccccagtctcaggccctacctagacccagctccaccctgctcaac
aacggaggcacactgccaggccatgacggcaccatgaaaggatcatcctcctgggtgtca
gagaagtctagagaggtccacagacccaggaaaaagacacctgtccaaaggggccagtct
gaggatgtcccaagcctaaccatcccccagtcagtggagatgaggaagatggacaccagt
tgcagcacagtgcctggtcctgggtctggactggagagccagggaagagctgtgtccatg
ccccgcctcaatgcagagctgcagaggagcaagtcgcgccactccccggggaccctgctg
gcacctgttcctgactgcagcccaatgaaacgctctgcgtccacccacgccccccagcgc
ccccaggaggtgaacctgcatgaacacaccctggagaggcccagcaccgaagaaaggcgt
caccatcaccgccaccaccaccgctgccaccaccaccgagagagggacaagaagcagcgg
tcactggacaggacgccaagcaccattggtgcaccaggtgacccggctgcagagccctcg
tctagagacagggtgcaggaccgcggccgctcccatgagaggaagaaccactcgacggca
agggagaaccagcgctactactcttgcgatcgctacagcagcagggaacactgccacacc
accaaatctgccaccactagctgtgccacctcccccagcgaggtgcaggaacccagcatc
aacaagcagggtagtggttcggttaaaggcagcccagtgatgttgacctcaggggctatc
acacctagccgtggacgcaggcagctcccacagacccccctgaccccccgccccgtggtg
acgttcaagactgcaaactcctcccctgtgcactttgtgtctgcccagtgtggcagcggc
ctgcccaccctgagtcctggccggctgagccgtgggctgtctgagcacaacgccctgctg
catagtggcacctctcacatcccctcccccatcacccgcatcagctctgagcccttcctg
ggctacagtcacagtgacccccaaggccagggtaggccgtactgcaacctccgggacgag
ctgctgagcccttatggtgccagagcacgctcccctcggactgcacgtcctcaaatgagg
ccgggggccctccacctgcctccgccaccccagcagagacgtgcggtgcccaacggatac
cacttcacctttggtggtaatggcaacgccagcctgggctctggctctggtgccaggcca
cccaggtactatcacgaggcagaggaggatgaatggtgctag
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