Salmo trutta (river trout): 115164727
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Entry
115164727 CDS
T08542
Name
(RefSeq) neurogenic locus notch homolog protein 1-like isoform X1
KO
K02599
Notch 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115164727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
EGF_2
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_DL_JAG
EGF_3
cEGF
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
115164727
NCBI-ProteinID:
XP_029573346
Ensembl:
ENSSTUG00000039930
UniProt:
A0A674DJJ7
LinkDB
All DBs
Position
27:complement(26018788..26077217)
Genome browser
AA seq
2522 aa
AA seq
DB search
MHPFFVKLTFLLSLIVLTRGLRCSMSELCLKLGRCEATADGNGECKCRDGFVGSKCQHRD
PCISSPCKNGGSCHTVPRGNSVDYTCFCQPGFTDRLCLTPIDSACLSSPCRNGGTCDLVN
LREYKCRCPPGWSGKQCQQADPCASNPCANGGQCTPFESHYICSCTPFFYGQTCKQDVNE
CAQSPSHCQNGGVCVNEVGTYRCQCPQEYTGKHCDIRYLPCNPSPCHNGATCVQKGDTTY
ECSCVPGFSGQNCDTNIDDCPGHECHNGGTCVDGVNTYNCQCKPEFTGQFCTEDVDECQL
MPNACQNGGTCHNIYGAYQCVCVNGWTGDDCGENIDDCANAACYQGAVCHDRVASFFCEC
PHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGMAICTCPLGYIGTACDQDVDECSLGGN
PCEHGGKCLNTKGSFQCKCQPGFSGARCEHDVNECLSNPCQNEATCLDQIGGFHCICMPG
YEGLFCQINTDECANNPCLNNGKCIDKINTFHCQCPTGFAGNLCQIDIDECSSTPCKNGA
KCTDGPNKYTCECTEGYTGQHCETDINECFSDPCHYGTCKDGLASFTCYCRLGYTGRLCE
TNINECLSQPCRNGGICQDRENSYICTCPMGTAGINCEVNLDDCKSKPCDYGTCLDKING
YECACEPGYSGTMCNINLDECALNPCHNGGTCIDGINSFTCQCPEGYHDATCFSQVNECL
SNPCIHGHCQDKVNGYNCLCDNGWSGKNCDINNNECESNPCMNGGTCKDMTSGYVCSCRI
GFTGPSCQTNINECASNPCLNQGTCIDDVSAYKCNCLLPYTGENCETLLAPCSPKPCKNG
GECQESEDYESFSCVCPEGWQGHTCEVDINECVKNPCLNGATCENTKGNYRCGCKAGYAG
RNCETNIDDCKPNPCSNGGFCRDEVDNFACTCLPGFRGTRCEEDINECDSNPCKNGASCT
DCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTYTCLCPPGFTGSYCQHD
INECDSRPCLNGGTCQDSYGTYKCICPQGYTGLNCQNLVRWCDSSPCQNGGTCWQTGTTY
SCECQTGWTGLYCDVPSVSCEVAAKQRGVEVIALCRNSGQCLDAGNTHYCHCQAGYTGSY
CEEQVDECIPNPCQSGATCTDFLGGYSCKCVPGYVGTNCSNEINECFSQPCQNGGTCIDL
INTYKCSCPRGTQGIHCEINIDDCNPFTDPVTNEPKCFNKGKCVDRVGGYHCICPAGYVG
ERCEGDVNECLSNPCDTRGTHNCVQLTNNYRCDCRTGYTGQRCDTVFDGCKSKPCRNGGT
CAVASNTPHGFICKCPPGYTGSTCEYDAHSCGSLHCRNGGTCISGHKSPKCLCPSSFTGP
ECEYPTDSPCNTNPCYNGGTCEYSSEAPYYHCVCPTNFNGLLCHILDYSFLGGFGRDITP
PPEVEVSCEIPQCEERKGNKFCDTLCNNHACGWDEGDCSLNFNDPWKNCTSSLQCWRYFN
DGKCDEQCNNAGCLYDGFDCQNLEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLDC
ANNMPEKLAVGRLVIVVHIMPDQLRNNSLGFLRELSRVLHTNVVFRQDSKGEMMIYPYYG
SEQELNKHNIKRSVGWTEIPGTMLSSMKNSLYTIASGNSRRRRELDPILIKGSIVYLEID
NRQCVQQSTECFQSATDVAAFLGALASSGNLNVPYIIEAVHSEVDPPPPSELYPIYAVLA
GLALLAFVGVGMVASRKRRREHGQLWFPEGFKISEPNKKKRREPVGEDSVGLKPLKNLSD
ISLMDDNQNEWGEEEPLDAKRFRQFEEQAILDLDSQTDHRQWTQQHLDAADLRIPSIAPT
PPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDTSANVISDFIYQGANL
HSQTDRTGETALHLAARYARSDAAKRLLEASADANIQDNMGKTPLHAAVAADAQGVFQIL
IRNRATDLDARMHDGTTPLTLAARLAVEGMVEELINCHADVNAIDDFGKSALHWAAAVNN
VEAATVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLEHFANREITDHMDRLPRDI
AQERMHHDIVRLMDEYNLVRSPPMHSHGHGGSMGTTLSPPLCSPNSYLGSMKPLVQSKKA
RKHSAKGIGCKDGKDMKNKKKTSQDGKGGSLLDSSAVLSPVDSLESPHGYISDVASPSMM
TSPFQQSPSMSLNHLQGMSDPHMGVNHMGMPNKQELARMQFDPLPPRLTHLPLSGSNGSG
GMNGQCDWLSRMHASMGQPGQFNPMRVGPVGGQGGLHQGGGQHGMMTSLHTGLPTTSLSQ
MLSYQGLQNTRLASQPHPMQQVQQQMQMQHQQNLQQQLQQQQQSIQLQHQNSSTGSSGHA
SNQNFISTELSGSEIQQGTGNQGSIPIHTILPQETQIMSQNLPSTQYLTPPSQHSYSGPM
DNTPNHQLQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGISSPPTSSMQSQIGHIPDQ
FK
NT seq
7569 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctttctttgtgaaactaactttcctgttgtcgctgattgttctaacacgaggt
ttaagatgctctatgtccgagttgtgtttgaaactggggaggtgtgaggccacagctgat
ggaaatggagagtgcaagtgtcgggatggattcgtagggagcaagtgtcagcaccgggac
ccttgcatctcctctccgtgtaaaaacggcggctcgtgtcacacggtaccccgtgggaac
tcagtggactacacgtgtttctgccaaccgggcttcacggaccgcctgtgtctgacgcca
atcgacagcgcttgtctcagctctccctgccggaacggtggcacctgtgatctggtcaac
ctcagagagtacaagtgtagatgtccccctggctggtcaggtaagcagtgccagcaggca
gacccctgtgcatctaacccctgtgccaacggcgggcagtgcacccccttcgagtcccac
tacatctgttcctgcacccccttcttctacggtcagacctgcaagcaggatgtcaatgaa
tgtgcccagagcccctcgcactgccagaacggaggggtgtgtgtgaacgaagtgggcacc
taccgctgccagtgtccccaggagtacacaggcaagcactgtgatatccgctacctaccc
tgcaacccctccccctgccacaacggggctacctgcgtccagaagggagacaccacctac
gaatgctcctgtgtgccaggtttctcgggtcagaactgtgacactaacattgacgactgt
ccaggacacgagtgtcacaatggaggaacctgtgtggacggggttaacacctataactgc
caatgcaaaccagaattcacaggccagttctgtacagaggacgttgacgagtgccagctg
atgcccaacgcgtgccagaacggtggaacgtgccacaacatctacggtgcctaccagtgt
gtgtgtgtcaacgggtggacgggggatgactgtggagagaatattgacgactgcgccaac
gcggcctgctatcagggggccgtctgccacgaccgcgtggcgtccttcttctgcgagtgt
ccccatggtcgcacaggtctgctgtgtcacctggatgacgcctgtattagtaacccctgt
cagaaaggctctaactgtgacaccaaccccgtcaatggcatggccatctgcacctgtccc
cttggctacattggcaccgcctgtgaccaggatgttgacgagtgctcactaggtggcaac
ccctgtgagcatggagggaagtgcctgaacaccaagggttctttccagtgtaagtgtcag
cccggcttctctggagctcgctgtgaacacgacgtcaacgagtgcctttccaacccctgc
cagaacgaagccacctgcctcgaccagataggaggtttccactgcatctgtatgccaggc
tacgagggactgttctgccagatcaatactgacgagtgcgccaacaacccctgcctgaac
aatgggaaatgtattgacaagatcaacaccttccactgccagtgccccacaggctttgct
gggaacctttgccagatagatattgatgagtgctccagcacaccttgcaagaatggtgcc
aagtgcacggatggccccaataagtacacctgtgaatgcactgaaggttacacggggcaa
cactgtgagactgacatcaatgagtgtttctcggacccctgtcactatggtacttgtaag
gatggcctggcctccttcacctgctactgtcgccttggttacacgggccggctgtgtgag
accaacattaacgagtgtctgagtcagccctgtcggaacggaggcatctgccaggaccgc
gagaactcctacatctgcacctgccccatgggcaccgcaggtataaactgtgaagtcaac
ctggatgactgcaagagcaagccatgtgactacgggacatgcctcgacaagatcaatggc
tacgaatgtgcctgcgagcccggctacagcgggaccatgtgtaacatcaaccttgatgaa
tgtgccctcaacccgtgtcacaacggtggcacctgcatcgatggcatcaacagcttcacc
tgtcagtgtccagagggttaccatgacgccacctgcttctcccaggtcaacgagtgcctt
agcaacccgtgtatccatggccactgtcaggacaaagtcaatggttacaactgtctgtgt
gacaatggctggagtggcaagaactgtgacatcaacaacaacgagtgtgagtccaacccc
tgcatgaacggaggcacctgcaaggatatgacgagcggatatgtctgctcctgcagaatc
ggcttcactggtccaagctgtcagaccaacattaacgaatgtgcttccaatccctgcctg
aaccaagggacctgcatcgatgatgtctctgcgtacaagtgcaactgcctactgccatat
accggtgagaactgtgagaccctgctggcaccctgcagccccaagccctgcaagaacgga
ggtgagtgtcaggagtctgaagactacgagagcttctcctgtgtgtgtccagagggctgg
caaggacacacctgtgaagtggacattaacgagtgtgtgaagaacccctgtctcaatggg
gccacctgtgagaacaccaaaggcaactaccgctgtggctgcaaggccggctatgcaggc
cgcaactgtgagaccaacattgacgactgtaagcccaacccctgcagcaatggaggtttc
tgtcgggacgaggtggacaactttgcgtgcacctgcctgcctggtttccgtggcactagg
tgtgaggaggacatcaacgagtgtgacagtaacccatgtaagaatggagccagctgtaca
gactgtgtcaacagctacacctgcacctgtccctctggcttcagtgggatacactgtgag
aacaacacacctgactgcactgagagctcttgtttcaacggtgggacgtgtgtggacggc
atcaacacctacacctgcctgtgcccacctggcttcactggcagctactgccaacacgac
atcaacgagtgtgactccagaccctgcctgaacggaggcacctgccaggacagctatggc
acctacaagtgcatctgtccccagggctacactggactcaactgccagaatctggtacgc
tggtgtgactcgtccccctgtcagaacgggggcacctgttggcagactggcactacttac
agctgtgagtgccagactggctggacagggctctactgtgacgtgccaagtgtctcctgc
gaggtggcagccaaacagagaggtgtggaggtaattgctctgtgtcgtaactcaggccag
tgtctggatgcggggaacactcactactgccactgccaggcgggctacacaggcagctac
tgtgaagagcaggtggatgagtgcatccccaacccctgtcagagcggagccacctgcact
gatttcctaggagggtactcctgcaagtgtgtgccgggatacgtcggtaccaactgctcc
aacgagatcaatgagtgtttctcccagccgtgccagaacggaggcacctgcattgacctg
atcaatacctacaaatgctcctgtcccaggggaacccaaggcattcactgtgagatcaac
atagacgactgcaaccccttcacagaccccgtcaccaacgagcccaagtgcttcaacaag
gggaagtgtgtggacagggtgggaggttaccactgtatctgtcccgccggctacgtaggg
gagcgctgtgagggggacgtcaacgagtgcctgtccaacccatgtgacacccgcgggaca
cacaactgcgtccagctcaccaacaactaccgctgtgattgccgcaccggatacacaggc
cagcgttgtgacacagtgtttgacggctgtaagagcaaaccctgtcgtaacggagggaca
tgtgccgtagccagcaacactcctcacggcttcatctgcaagtgtccacctggctacact
ggctccacctgtgagtacgatgcccactcctgtgggagtctccactgtcgtaatggtggc
acctgcatctctggacacaagagccccaagtgtctctgtccttcctcgttcacggggcca
gagtgtgaataccctacagacagcccctgtaacaccaacccctgctacaacgggggaacc
tgtgagtacagctcagaggctccatactaccactgcgtatgccccaccaacttcaacggc
ctgctatgtcacatcctggactacagcttcctgggtgggttcggccgtgacatcacgccc
ccgcccgaggtggaggtgagctgtgagatcccccagtgtgaggaaagaaaggggaacaag
ttctgtgataccttgtgtaacaaccacgcgtgtggctgggacgagggcgactgctcgctc
aacttcaacgacccgtggaagaactgcacgtcgtccctgcagtgctggcgctacttcaac
gacgggaagtgtgacgagcagtgcaacaacgccggctgtctctacgatggctttgactgt
cagaacctggagggccagtgcaaccctctgtacgaccagtactgtaaagaccactatgcg
gacggccactgtgaccagggctgcaacaacgctgagtgtgagtgggatggtctggactgt
gccaacaacatgccagagaagctggcagtgggccgcctggtcatcgtggtccacatcatg
cccgaccagctccggaacaactcgcttggcttcctgcgcgagctgagccgcgttctccac
accaacgtggtgttccggcaggactccaagggagagatgatgatctacccgtattacggc
agtgagcaggagctgaacaaacacaacataaagcgctcagtgggttggacagagatccct
ggcaccatgctcagctccatgaagaatagcctgtatactatagccagtggaaacagccgc
agacgcagggagctggaccccattctgatcaaaggctccatagtgtacctggagattgac
aaccgccagtgcgtccagcagtccacagagtgcttccagagtgccactgatgtagcagcc
ttcctgggggccctggcctccagtggaaacctcaacgttccctacatcatagaggctgtt
cacagtgaggttgaccccccgcctccgtctgagctttaccccatctacgcggtcctggcc
gggctggccctcctggctttcgtgggtgtggggatggtcgcctcacggaagcgtcgtcgc
gagcacggccagttgtggttcccggagggcttcaagatcagtgagcccaacaagaagaag
aggagggagccggtgggggaggattcagtgggattgaagccactgaaaaacctctcggac
atatcactgatggacgacaaccagaatgaatggggagaagaggagcctttggatgccaag
cgctttaggcagtttgaggagcaggcgatactggacctggatagccagacagaccaccgc
cagtggacccagcagcacctggatgcggctgatctccgtatcccctccatcgcccccaca
ccccctcagggcgagatcgagaacgactgcatggacgtcaacgtacggggaccagatggc
ttcaccccactgatgatcgcctcctgtagcggtggaggtctggaaacaggaaacagcgag
gaggaggaagacacctctgccaacgtgatcagtgatttcatttaccagggtgctaacctc
cacagtcagacagaccgcacaggggagaccgcccttcatctcgctgcccgctacgcccgc
tctgatgctgccaagcgccttctggaggccagtgcagatgccaacatccaggacaacatg
ggcaagaccccgttacacgctgccgtggccgctgacgcgcagggcgtcttccagattttg
attaggaatcgtgccacagacctggatgcccgcatgcacgatggcaccacccctctgacc
ctggcagcccgcctggcagtggagggcatggtggaggagctcatcaactgccatgctgac
gtcaacgctatcgatgactttggcaaatctgctctgcactgggcagcagcagtgaacaac
gttgaagcagctaccgtactactgaagaatggagccaacaaggacatgcagaacaacaag
gaggagacccctctgttccttgctgccagggaaggaagctacgagacggccaaggtcctg
ctggagcactttgctaaccgcgagataactgatcacatggaccggctgccccgagacata
gcgcaagagaggatgcaccatgacattgtccgtctcatggacgagtacaacctggtccgc
agcccacccatgcacagccacggccatggaggctctatgggcaccactctgtccccccct
ctctgctcccccaacagctacttgggcagcatgaagcccttggtccagagcaagaaggcc
cgcaagcacagcgccaagggcatcggctgcaaggacggcaaggacatgaagaacaagaag
aaaacctcccaggatgggaagggaggaagtctgttggacagctcagctgttctgtccccc
gtggactccctggagtctccacacgggtatatctctgacgtggcgtccccttccatgatg
acgtcccccttccagcagtctccgtccatgtcactcaaccacctccaggggatgtccgac
ccccatatgggggtcaaccacatgggtatgcccaacaagcaggagctagcgcgcatgcag
tttgacccgcttccaccccgtctcacccaccttccgttgtcaggctccaacggctctggg
ggcatgaatggccagtgtgattggctctccaggatgcacgccagcatgggtcagcccgga
cagttcaaccccatgagggttggtcctgtcggggggcagggcggtctgcaccagggaggc
gggcagcacggcatgatgacctctctccacaccgggcttcccaccaccagcctgtcccag
atgttgagctaccagggcctgcagaacacccggctggcctcgcagccccaccccatgcag
caggtccaacagcagatgcagatgcagcaccaacagaacctacaacagcagctccaacag
cagcaacagagcatccagctgcagcaccagaactctagcactggcagcagtggccatgcc
agcaaccagaacttcatcagcaccgaactgagtggctcagagatccagcagggcacaggg
aaccagggctccatacccatccacaccatcctgccccaggagacccagatcatgagccag
aacctgcccagcacccagtaccttacccctccatcccagcacagctactccggccccatg
gacaacacccccaaccaccagctacaggtccccgaccacccctttttgaccccctccccc
gggtctcccgaccaatggtccagctcatccccacattctaacatgtctgactggtcggag
ggcatctcaagtccaccaaccagcagcatgcagtctcagatcggacatatccccgatcag
ttcaagtag
DBGET
integrated database retrieval system
