Salmo trutta (river trout): 115164812
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Entry
115164812 CDS
T08542
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115164812
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115164812
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115164812
Nuclear receptors [BR:
stru03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
115164812
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF2716
Motif
Other DBs
NCBI-GeneID:
115164812
NCBI-ProteinID:
XP_029573486
Ensembl:
ENSSTUG00000016996
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All DBs
Position
27:28539271..28581831
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AA seq
471 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAAYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRILNERQQQTCEAEALAR
VYSSSLTNGLSTLNHEIGGTYANGHVIELPKGQVNGGATGGYYHGMDSTQPSPDQSGLDL
AGIKHIKQEPVYDLTPVANLFNYSTYQDSQLAHSNVSMGELDRIAQNIIKSHLETCQYTA
DELQQLAWQTHSYDDIKMYQSKTRDVLWQQCAIQITHSIQYVVEFAKRISGFMELCQNDQ
ILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAKSLCS
LQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALAKLIG
RIPMLSAVCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNAAITMPK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaagttataccgtgcaaaatctgtggagacaagtcatcaggaatc
cactatggagtcatcacgtgtgagggctgcaaagggttcttcagacgaagtcagcagaac
aacgctgcatactcctgccctcgccagaggaactgtctgatcgacaggaccaaccgaaac
cgctgccagcactgccgcttacagaaatgtcttgcacttggaatgtccagagatgcggtg
aagtttggccgcatgtccaagaagcagcgtgacagcctgtacgccgaggtacagaagcac
cagcagcggatcctgaatgagcggcagcagcagacgtgtgaggccgaggccctggcgcgc
gtctactcctccagcctgaccaacggcctcagcaccctcaaccacgagatcggaggcacc
tacgccaacggccacgtcatcgagctccccaagggccaggtgaacggtggtgccacaggt
ggctactaccatggtatggactccacccagccctccccggaccagtcaggcctggacttg
gcgggcattaagcacatcaagcaggagccggtgtacgacctgacccctgtggctaacctg
ttcaactatagcacctaccaggacagtcagctggcgcacagcaatgtcagcatgggagag
ctagatcgtatcgcccagaacattataaagtctcacctggagacctgtcaatacacagca
gatgaactgcagcagctggcctggcaaacacactcctacgatgacatcaagatgtaccag
agcaaaacgcgagacgtgctgtggcagcagtgtgccatccagatcacccattccatccag
tatgtggtggagtttgccaagcgcatctcaggcttcatggagctttgccagaacgaccag
atcctcctgctcaagtcaggttgtctggaggtggtcctggttagaatgtgtcgggcgttt
aaccctctcaacaacacagtgctgtttgaggggaagtacgggggcatgcagatgttcaaa
gcactaggctgtgacgacctggtcagcgctgtgtttgactttgccaagagtctgtgctct
ctgcagctcactgaggaggagatcgctctgttctccgcagcagtgctcatctccacagac
cgtccatggctgatggagcccaggaaggtgcaaaagctccaggagaagatctactttgcg
ctgcagcacatcatgcagaagaaccacatggacgaggacgcgctggctaagctgattggt
cggatacccatgctgtcggccgtgtgtactctccacacagaggagctgcaggccttccag
cagcttcaccccgagacggtgaacgtgctcttccccccgctctacaaggagctgttcaat
cccgaccccaatgcagcgatcaccatgcccaagtga
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