Salmo trutta (river trout): 115164839
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Entry
115164839 CDS
T08542
Symbol
rmi1
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115164839 (rmi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115164839 (rmi1)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
115164839 (rmi1)
FA (Fanconi anemia) pathway
115164839 (rmi1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RMI1_N_C
RMI1_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
115164839
NCBI-ProteinID:
XP_029573548
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Position
27:complement(29353355..29356805)
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AA seq
592 aa
AA seq
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MSPQDVLATQTWLQSSWQVQVPFAWLEACVEWLQQEGGAPLPQHQLNQQVLDQWLLTDLR
DLAHSVLPAGLSHAQKSELSGSFCVQLDSLLDISQPAYGQLQRWRGTDCTNEAVSAVTQA
TQRTWEAKPTRMLLLQLTDGVQTLEAMEYQPIPALSTTLKPGVKLQLQGQITCRLGVLLL
KPGNVKVLGGEVEELGERHSQGKVLCRALGLPEEEPQGPAEQPEVPQPVNQQADNQESDD
LELLASLETQERQVGWSVEPSLESGYRTRSEESSASYRNASLQSQRVESLADSLLVSSSP
HEVLELDNLDIPDEDFDDLPLDELDGMIFQESPIQLTNRRDNQRDNLRRRQEEVSNHYAP
PLDDMRNESHFDSLDERDDPVLDEDMSCFFPPEPKASRHEQRRDSTCVRELGTGQPSVAG
AERLSTNIPESVATVTLDSSPFTYLCLLQQVAVGASGLPECVSEVCVKAFIVTLQGNLKC
SKGEWRVSASISDGTGYMDVHLSDQVLTGLLGFSAAEKSKLDPARKDAGMKACQQGLVDM
CCVMTLRLDPAGGKAVVLKADAVTEEDFRALEERVKGRRGQEDFGTWTSGGC
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagccctcaggatgtgctagcaacccagacctggcttcagtcctcttggcaggtccag
gtgcctttcgcctggttagaggcatgtgtggagtggctgcagcaggaaggaggcgccccc
ctgcctcaacaccagcttaatcagcaggtcctggatcagtggctgctgaccgatctacgt
gacctggcccactctgtgctccctgcagggctatctcatgcccagaagtcggagctcagc
ggcagcttctgcgtgcagctggactccctactggacattagccagcctgcctatggccag
cttcagcgctggaggggcactgactgcaccaacgaggctgtgtcagccgtcacccaggcc
acccagcggacctgggaggccaaacccacacgcatgctgctgctgcagctcactgatggt
gtgcagaccctggaggccatggagtaccagcccatccctgcactcagcaccaccctcaag
ccaggagtcaaactgcagttgcagggccaaataacctgccggctaggggtgctactgctg
aagccaggcaacgtaaaggtgctgggaggggaggtggaggagctgggtgagaggcactct
caagggaaggtgctatgcagggctctgggactgcctgaggaggagccacagggtccggcc
gagcagccagaggtcccacaaccagttaaccagcaggctgacaaccaggaatcagacgac
ctggagctgctggccagcctggagacccaggagaggcaggtggggtggagtgtggaaccc
agcctggagagtggctacaggacccgcagtgaggaatcctctgcctcttacagaaatgcc
tcgttgcagagtcaacgcgttgaaagccttgcagattctctactcgtaagctcttcaccc
catgaggtccttgaactggacaatttggacattccagatgaggactttgatgaccttccc
ctggatgagcttgatggtatgattttccaggagagcccaatccaactgacaaacaggaga
gataatcaaagagacaacctgaggagaaggcaggaagaagtatctaaccactacgctcca
ccattagatgacatgagaaacgaaagccattttgactcccttgatgagagggatgatcct
gttttggatgaggacatgagctgcttcttcccaccagagccaaaagcttctagacacgag
caaagacgagatagtacctgtgtcagagaactgggaacaggccagccctctgtggcagga
gcagagaggctctcaaccaatatcccagagagtgtggcgactgtgacgctcgattcatcc
ccgtttacgtacctgtgtttgctgcaacaggttgctgtgggcgcctcaggcctgccggag
tgcgtgagtgaggtgtgtgtgaaagccttcatcgtcaccctgcaagggaacctcaaatgc
agtaagggggagtggcgggtcagcgcctcaatctctgatggaactggttacatggacgtt
cacctctcagaccaggttctgacgggcctgctggggttctcagcggctgagaagtcgaag
ttagacccagcccggaaggacgcagggatgaaggcgtgtcagcagggccttgtggacatg
tgttgcgtgatgactctgaggttggaccccgccggtgggaaggctgtggtcctcaaggct
gatgcagtcacagaggaggacttccgagccctggaggagcgagtgaaaggcaggcgtggg
caggaggactttgggacctggaccagtggaggctgctga
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